cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 606 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 606 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 606 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 606 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 SLKEVIKCTA I ---------- Site 1348
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD EDEGTKDYKQ G ---------- Site 1337
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge HGGRFIQYNI F ---------- Site 1342
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---MENRNSS K ---------- Site 1348
Candida.guilliermondii.IME2 PQRSNLHDKT P ---------- Site 1333
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ------MDHV V ---------- Site 1348
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g TDGTTGEKKT I ---------- Site 1350
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ILKESRPEII V ---------- Site 1348
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 PPSLHVSSNL N ---------- Site 1326
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho KVKLSSERER V ---------- Site 1348
Schizosaccharomyces.octosporus.b.IME2 KEIPFSSLNL K ---------- Site 1344
Candida.albicans.MAPK3..Extracellular.signal.regul ATTSSSPRQV S ---------- Site 1345
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. RPKDYWDYES L ---------- Site 1342
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 RNNGFFDKTA E ---------- Site 680
Suberites.domuncula.JNK..Stress.activated.protein. SSSDYYSQRV G ---------- Site 1342
Homo.sapiens.CLK3..Dual.specificity.protein.kinase SQQSSKRSSR S ---------- Site 1331
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci RRKRSRSVED D ---------- Site 1335
Homo.sapiens.CLK2..Dual.specificity.protein.kinase HSSRRAKSVE D ---------- Site 1334
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos KKLDTAPEKF S ---------- Site 1329
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TKSSSSSGEG D ---------- Site 1334
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---MSFICIP M ---------- Site 1348
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. RSREYWDYEA H ---------- Site 1342
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM NGTGSTEVPQ S ---------- Site 1336
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ------MDRI V ---------- Site 1348
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ------MDLR I ---------- Site 1348
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH EEEGFDAYRK G ---------- Site 1336
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d SRMSRRASLS D ---------- Site 700
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. HKHERPRSEG H ---------- Site 1326
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VDNQFYSVEV G ---------- Site 1342
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VDNQFYSVEV G ---------- Site 1342
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. RKKGFYKQDV N ---------- Site 1342
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QVQAAAAATV K ---------- Site 1336
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 EQEDPNDYCK G ---------- Site 1337
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RDSNFSVFEI G ---------- Site 1342
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d AVSSQANSQP P VQVSVKTQVS Site 628
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. DDRSYKE--- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ADAADERSRK E ---------- Site 1348
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ILKESRPEII V ---------- Site 1348
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ------MEPR V ---------- Site 1348
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO RSSSGADGDY Q ---------- Site 1338
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C RPKDYWDYES L ---------- Site 1342
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AQVQAAAVKA H ---------- Site 1339
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei SKQNCTTGEG D ---------- Site 1334
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O TEGDYVPDSP A ---------- Site 1326
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --MKIPDIGN V ---------- Site 1348
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SSRRAKSVED D ---------- Site 1335
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O TEGDYVPDSP A ---------- Site 1326
Naegleria.gruberi.LF4 CDEGHSDDEF G ---------- Site 1332
Saccharomyces.bayanus.IME2 GSEFSIPPDV D ---------- Site 1337
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. RSREYWDYEA H ---------- Site 1342
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a SRPGYFRQEI N ---------- Site 1342
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th SNNNYNNNTT T ---------- Site 1314
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos LNHGYDDDNH D ---------- Site 1339
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos KKRQGMTGGP N ---------- Site 1329
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --MKIPNIGN V ---------- Site 1348
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --MCAAEVDR H ---------- Site 1347
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific QTPNYRQPNP N ---------- Site 1290
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos KKLNVVPEKF S ---------- Site 1329
Aspergillus.nidulans.IME2 PSRGLTPTSM A ---------- Site 1346
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi RDIEELCEAV P ---------- Site 1346
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QKQQQVQQIP T ---------- Site 1325
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VDNQFYSVEV G ---------- Site 1342
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. DDREMEATVV D ---------- Site 1325
Penicillium.marneffei.IME2 SHEYSLKGTS H ---------- Site 1343
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ARPTFYRQEL N ---------- Site 1342
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a AEKGDCIASV Y ---------- Site 1344
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH DMQDNWDDIE G ---------- Site 1338
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ERENVDTFEA S ---------- Site 1271
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SQTNSQPPVQ V ---SMKTQVS Site 631
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GSSTFSPIVL T ---------- Site 1341
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d RKEGFFTVPP E ---------- Site 1340
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VDNQFYSVEV G ---------- Site 1342
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a CDSQFYSVQV A ---------- Site 1342
Homo.sapiens.CLK1..Dual.specificity.protein.kinase RSHGKSHRRK R ---------- Site 1328
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis KNEQNFKLAG V ---------- Site 1334
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ILKESRPEII V ---------- Site 1348
Candida.parapsilosis.IME2 SPPKHVTVHS Y ---------- Site 1348
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ATLGQGPERS Q ---------- Site 1348
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. CDSQFYSVQV A ---------- Site 1342
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki RPREYWDYES H ---------- Site 1342
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U SHSKSHRRKR S ---------- Site 1329
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a AEKGDCIASV Y ---------- Site 1344
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d RLPEGYLEKL T ---------- Site 685
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. RPREYWDYES H ---------- Site 1342
Yarrowia.lipolytica.SSN3..Serine.threonine.protein RMLGGGTNPF A ---------- Site 1335
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. VKCKFRKEEV N ---------- Site 1342
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos LNHGYDDDNH D ---------- Site 1339
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE RPREYWDYEA H ---------- Site 1342
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSKPRSNKF D ---------- Site 1341
Candida.orthopsilosis.IME2 SPPKHVTVHS Y ---------- Site 1348
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---MALDVKS R ---------- Site 1348
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str VPENYYVVPI G ---------- Site 1342
Debaryomyces.hansenii.IME2 NPPSGIPLKS F ---------- Site 1348
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati PLQNPATAEI F ---------- Site 1321
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin STRSLWSQQQ Q ---------- Site 694
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE MPTDISPERD L ---------- Site 1348
Caenorhabditis.briggsae.CDK1 KNDMNYT--- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO KPDEYWDYEN Y ---------- Site 1342
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos KKRQGVIGGP N ---------- Site 1329
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --MDKDGTNL A ---------- Site 1348
Monosiga.brevicollis.CDK1 --------MA L ---------- Site 1348
Saccharomyces.cerevisiae.SKY1 NEESLKDYRP G ---------- Site 1336
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ----MASGQR S ---------- Site 1343
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ATPGQGTDRV Q ---------- Site 1348
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --MCTVVDPR I ---------- Site 1348
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --------MR S ---------- Site 1348
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --MKIPNIGN V ---------- Site 1348
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa SDTSNFNDNI S ---------- Site 1338
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --MEKDGLCR A ---------- Site 1348
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep RKEGFFTVPP E ---------- Site 1340
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RDNNFYSVEI G ---------- Site 1342
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. RKRGFYKQDI N ---------- Site 1342
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO QAKKFGDGDP F ---------- Site 1350
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SGGGGVPAVP S ---------- Site 1333
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VDNQFYSVEV G ---------- Site 1342
Saccharomyces.cerevisiae.CDK1 -------MSG E ---------- Site 1348
Lodderomyces.elongisporus.IME2 SPQPPQSPKN L ---------- Site 1343
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ERPTFYRQEV N ---------- Site 1342
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un SRQSSRRAKS V ---------- Site 1332
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --MKIPNIGN V ---------- Site 1348
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. TVVKGHSNPR S ---------- Site 1346
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ERRIQELDQT V ---------- Site 1348
Homo.sapiens.CLK4..Dual.specificity.protein.kinase SKSHRRKRSR S ---------- Site 1331
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U SKNSGSNSEG D ---------- Site 1334
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ATVGQGPERS Q ---------- Site 1348
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 IREGEVAHEG D ---------- Site 1344
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro PMHLYRARRD K ---------- Site 1343
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d IAARGVDVRS R ---------- Site 1348
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi GQPACFQQQQ H ---------- Site 1323
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ATPGQGPDRP Q ---------- Site 1348
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable RRPTQGERGP G ---------- Site 1343
Aspergillus.fumigatus.IME2 RVPATTSMAT L ---------- Site 1348
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan KVKLTGERER V ---------- Site 1348
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RRRGFYRQEL N ---------- Site 1342
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S QKQQQVPQIP T ---------- Site 1325
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma TSKNSGSNSE G ---------- Site 1333
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina RTEGVGPGVP G ---------- Site 1336
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d RIPDGYLEKL Q ---------- Site 679
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. RKEGFFTVPP E ---------- Site 1340
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S AQHQHYTVEV G ---------- Site 1342
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. SRKGFYRIEI N ---------- Site 1342
Candida.glabrata.IME2 SPPSTIPLKS M ---------- Site 1348
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 TNTVFTGKQP K ---------- Site 1337
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P QPEQAPARQI S ---------- Site 1345
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ----MATIQS E ---------- Site 1348
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. SSSGSKAEFI V ---------- Site 1348
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d TRMSRRASLS D ---------- Site 700
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SRQSSRRAKS V ---------- Site 1332
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH TARDGSTGEV K ---------- Site 1348
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ARVGRPARED V ---------- Site 1348
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR VATDGVDQQV E ---------- Site 1349
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. RGDGFFEVPA A ---------- Site 1340
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci SQQSSKRSSR S ---------- Site 1331
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos KERKVYNDGY D ---------- Site 1334
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act AAKNLALLKA R ---------- Site 1340
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ERPTFYRQEL N ---------- Site 1342
Lachancea.thermotolerans.SKY1 NEESLRDYKP G ---------- Site 1336
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a MAEKFESLMN I ---------- Site 1343
Dictyostelium.discoideum.CDK1 -----MESDG G ---------- Site 1348
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ARKGFYRQEV T ---------- Site 1342
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U TKSSSSNGEG D ---------- Site 1334
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. RPREYWDYES H ---------- Site 1342
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -------MEA F ---------- Site 1348
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. RPRSNSDSFQ E ---------- Site 1331
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --MSSEDIDK H ---------- Site 1347
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos KERKVYNDGY D ---------- Site 1334
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ATPGQGPDRP Q ---------- Site 1348
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ATNAFGADVM S ---------- Site 1348
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD KPAKKLPPVV D ---------- Site 1328
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 NPPFYIPLKN I ---------- Site 1348
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci SKSHRRKRSR S ---------- Site 1331
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AGPEMVRGQV F ---------- Site 1346
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. RPRSNSDCFQ E ---------- Site 1331
Cryptococcus.neoformans.IME2 RDRGNRMTDP D ---------- Site 1334
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ----MSTIQS E ---------- Site 1348
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote EQEDPNDYCK G ---------- Site 1337
Candida.lusitaniae.IME2 FFILFLLHSL P ---------- Site 1331
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TKSSSSSGEG D ---------- Site 1334
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A TQQERAKVED L ---------- Site 1351
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca RPREYWDYES H ---------- Site 1342
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a VAKNLALLKA R ---------- Site 1340
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 DPPKNIPLKS L ---------- Site 1348
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec YSRSHHRRSR K ---------- Site 1327
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---MAVDVKS R ---------- Site 1348
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. VRRHSSPSSP T ---------- Site 1342
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly PNESGHTVTT G ---------- Site 1340
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS PEIKEEMIQL Y ---------- Site 1342
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---MALDVKS R ---------- Site 1348
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho MAKQYDSVEC P ---------- Site 1344
Homo.sapiens.HIPK2..Homeodomain.interacting.protei TSKNSGSNSE G ---------- Site 1333
Acyrthosiphon.pisum.CDK1 VKEGPTKNVS I ---------- Site 1348
Candida.tropicalis.CDK1 SPPKNLTVHS Y ---------- Site 1348
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin KMKTQIERTK V ---------- Site 1348
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G APRITRDKDG N ---------- Site 1331
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR RPREYWDYES Y ---------- Site 1342
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de RLPEGYLEKL T ---------- Site 685
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 RPKDYWDYES L ---------- Site 1342
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d RIPDGYLEKL Q ---------- Site 679
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RRRGFYRQEL N ---------- Site 1342
Candida.albicans.SSN3..Serine.threonine.protein.ki LTLGPFKHRK D ---------- Site 1342
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GDLGRYKHVL G ---------- Site 1335
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ATEGPPPDRT K ---------- Site 1348
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara SRVEFSREEI N ---------- Site 1342
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de VPKLHFVGCS H ---------- Site 1348
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei RPRDYWDYES H ---------- Site 1342
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SKQSTASGDG D ---------- Site 1334
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d TEGDYVPDSP A ---------- Site 1326
Candida.dubliniensis.IME2 SPPKHLTVHS Y ---------- Site 1348
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SDGQFYSVQV A ---------- Site 1342
Aspergillus.niger.IME2 LSRGAAPTSV A ---------- Site 1346
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge QSYVFYRQEL N ---------- Site 1342
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. VRRHSSPSSP T ---------- Site 1342
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein RPREYWDYES H ---------- Site 1342
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty GNQPHYDSHV N ---------- Site 1290
Schizosaccharomyces.japonicus.IME2 KEKSVTTCTK L ---------- Site 1348
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. VPENYYSVTI G ---------- Site 1342
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RMGEVIRERV Q ---------- Site 1340
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE NCGGPRPAAL T ---------- Site 1348
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. VATDGVDQQV E ---------- Site 1349
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ARSGFYRQEV T ---------- Site 1342
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ RPQEYWDYEQ G ---------- Site 1341
Kluyveromyces.waltii.IME2 NPPFYIPVKP I ---------- Site 1348
Debaryomyces.hansenii.SKY1 VPGGYHTCYI G ---------- Site 1344
Saccharomyces.cerevisiae.IME2 GSEFSVPPDV D ---------- Site 1337
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ----MEKDSL A ---------- Site 1348
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein RSREYWDYEA H ---------- Site 1342
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a MAEKFESLMN I ---------- Site 1343
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --MEKDSLSR A ---------- Site 1348
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST KTKERTIHKR V ---------- Site 1330
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk PRKGYYTQEV N ---------- Site 1342
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act REKEYYSIDV G ---------- Site 1342
Candida.albicans.IME2 SPPKHLTVHS Y ---------- Site 1348
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------MSKE M ---------- Site 1348
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k KEKQYFSSLR S ---------- Site 1341
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ERPTFYRQEL N ---------- Site 1342
Kluyveromyces.lactis.IME2 NPPFYIPLKN I ---------- Site 1348
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina AAKNLALLKA R ---------- Site 1340
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VDNQFYSVEV G ---------- Site 1342
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. PRAGFYRQEL N ---------- Site 1342
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ILKESRPEII V ---------- Site 1348
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. PRAGFYRQEL N ---------- Site 1342
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U SPGRGSPMEA I ---------- Site 1348
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME RSQSSLEDEV D ---------- Site 681
Neurospora.crassa.IME2 SSHGIGSGQA L ---------- Site 1348
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th TTTTPTSTSP T ---------- Site 1249
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 -MAVPNDMKS I ---------- Site 1348
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar WGEGYFEVPA S ---------- Site 1340
Ashbya.gossypii.IME2 NPPFYIPLKP V ---------- Site 1348
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi TPYSQLARLQ Q ---------- Site 1320
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos KKRHGVIGGP N ---------- Site 1329
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p PPPTIDPNDP V ---------- Site 1348
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --MNITEVEE H ---------- Site 1347
Schizosaccharomyces.pombe.b.IME2 SNESIYSVLD L ---------- Site 1343
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AGPEMVRGQV F ---------- Site 1346
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom SKQNCTSGEG D ---------- Site 1334
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch QRSNSRTRAL S ---------- Site 1331
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ------MELR V ---------- Site 1348
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac RDNNFYSVEI G ---------- Site 1342
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 PDIQPVTEDR R ---------- Site 1341
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil NTIGSVHGKA P ---------- Site 1323
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K EMDDLYDKVP Q ---------- Site 1347
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly KVQDGVTGET R ---------- Site 1348
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk TARDGSTGEV K ---------- Site 1348
Species Residue at Site 606
in 'muscle'
msaprobs

The residue for every species at site 606 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro PMRTETDLQQ Q ---------- Site 1318
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QVQAAAAATV K ---------- Site 1336
Scheffersomyces.stipitis.SKY1 VPGGYHTCYI G ---------- Site 1344
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 18:08, July 4th 2020
Questions/Comments? help@phylobot.com