cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 605 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 605 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 605 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 605 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 RSLKEVIKCT A I--------- Site 1347
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD NEDEGTKDYK Q G--------- Site 1336
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge SHGGRFIQYN I F--------- Site 1341
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ----MENRNS S K--------- Site 1347
Candida.guilliermondii.IME2 LPQRSNLHDK T P--------- Site 1332
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -------MDH V V--------- Site 1347
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g VTDGTTGEKK T I--------- Site 1349
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 RILKESRPEI I V--------- Site 1347
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 LPPSLHVSSN L N--------- Site 1325
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho FKVKLSSERE R V--------- Site 1347
Schizosaccharomyces.octosporus.b.IME2 SKEIPFSSLN L K--------- Site 1343
Candida.albicans.MAPK3..Extracellular.signal.regul AATTSSSPRQ V S--------- Site 1344
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. IRPKDYWDYE S L--------- Site 1341
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 KRNNGFFDKT A E--------- Site 679
Suberites.domuncula.JNK..Stress.activated.protein. MSSSDYYSQR V G--------- Site 1341
Homo.sapiens.CLK3..Dual.specificity.protein.kinase RSQQSSKRSS R S--------- Site 1330
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci HRRKRSRSVE D D--------- Site 1334
Homo.sapiens.CLK2..Dual.specificity.protein.kinase QHSSRRAKSV E D--------- Site 1333
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos AKKLDTAPEK F S--------- Site 1328
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TTKSSSSSGE G D--------- Site 1333
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ----MSFICI P M--------- Site 1347
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. LRSREYWDYE A H--------- Site 1341
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM VNGTGSTEVP Q S--------- Site 1335
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -------MDR I V--------- Site 1347
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -------MDL R I--------- Site 1347
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH GEEEGFDAYR K G--------- Site 1335
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LSRMSRRASL S D--------- Site 699
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. GHKHERPRSE G H--------- Site 1325
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET KVDNQFYSVE V G--------- Site 1341
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U KVDNQFYSVE V G--------- Site 1341
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. IRKKGFYKQD V N--------- Site 1341
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AQVQAAAAAT V K--------- Site 1335
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 DEQEDPNDYC K G--------- Site 1336
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. KRDSNFSVFE I G--------- Site 1341
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SAVSSQANSQ P PVQVSVKTQV Site 627
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ADDRSYKE-- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G AADAADERSR K E--------- Site 1347
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 RILKESRPEI I V--------- Site 1347
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -------MEP R V--------- Site 1347
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO KRSSSGADGD Y Q--------- Site 1337
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C IRPKDYWDYE S L--------- Site 1341
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl PAQVQAAAVK A H--------- Site 1338
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei GSKQNCTTGE G D--------- Site 1333
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O LTEGDYVPDS P A--------- Site 1325
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---MKIPDIG N V--------- Site 1347
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci HSSRRAKSVE D D--------- Site 1334
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LTEGDYVPDS P A--------- Site 1325
Naegleria.gruberi.LF4 MCDEGHSDDE F G--------- Site 1331
Saccharomyces.bayanus.IME2 SGSEFSIPPD V D--------- Site 1336
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. LRSREYWDYE A H--------- Site 1341
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a RSRPGYFRQE I N--------- Site 1341
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th NSNNNYNNNT T T--------- Site 1313
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos VLNHGYDDDN H D--------- Site 1338
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos AKKRQGMTGG P N--------- Site 1328
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---MKIPNIG N V--------- Site 1347
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---MCAAEVD R H--------- Site 1346
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific CQTPNYRQPN P N--------- Site 1289
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos AKKLNVVPEK F S--------- Site 1328
Aspergillus.nidulans.IME2 HPSRGLTPTS M A--------- Site 1345
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi KRDIEELCEA V P--------- Site 1345
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QQKQQQVQQI P T--------- Site 1324
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. KVDNQFYSVE V G--------- Site 1341
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. RDDREMEATV V D--------- Site 1324
Penicillium.marneffei.IME2 ISHEYSLKGT S H--------- Site 1342
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen KARPTFYRQE L N--------- Site 1341
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a MAEKGDCIAS V Y--------- Site 1343
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ADMQDNWDDI E G--------- Site 1337
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr YERENVDTFE A S--------- Site 1270
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SSQTNSQPPV Q V---SMKTQV Site 630
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GGSSTFSPIV L T--------- Site 1340
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d IRKEGFFTVP P E--------- Site 1339
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin KVDNQFYSVE V G--------- Site 1341
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a KCDSQFYSVQ V A--------- Site 1341
Homo.sapiens.CLK1..Dual.specificity.protein.kinase RRSHGKSHRR K R--------- Site 1327
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis KKNEQNFKLA G V--------- Site 1333
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 RILKESRPEI I V--------- Site 1347
Candida.parapsilosis.IME2 DSPPKHVTVH S Y--------- Site 1347
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen VATLGQGPER S Q--------- Site 1347
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. KCDSQFYSVQ V A--------- Site 1341
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki HRPREYWDYE S H--------- Site 1341
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U QSHSKSHRRK R S--------- Site 1328
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a MAEKGDCIAS V Y--------- Site 1343
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d IRLPEGYLEK L T--------- Site 684
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. HRPREYWDYE S H--------- Site 1341
Yarrowia.lipolytica.SSN3..Serine.threonine.protein SRMLGGGTNP F A--------- Site 1334
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. SVKCKFRKEE V N--------- Site 1341
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos VLNHGYDDDN H D--------- Site 1338
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE SRPREYWDYE A H--------- Site 1341
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSKPRSNK F D--------- Site 1340
Candida.orthopsilosis.IME2 DSPPKHVTVH S Y--------- Site 1347
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ----MALDVK S R--------- Site 1347
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str SVPENYYVVP I G--------- Site 1341
Debaryomyces.hansenii.IME2 NNPPSGIPLK S F--------- Site 1347
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati KPLQNPATAE I F--------- Site 1320
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ASTRSLWSQQ Q Q--------- Site 693
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -MPTDISPER D L--------- Site 1347
Caenorhabditis.briggsae.CDK1 RKNDMNYT-- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO HKPDEYWDYE N Y--------- Site 1341
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos AKKRQGVIGG P N--------- Site 1328
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---MDKDGTN L A--------- Site 1347
Monosiga.brevicollis.CDK1 ---------M A L--------- Site 26
Saccharomyces.cerevisiae.SKY1 RNEESLKDYR P G--------- Site 1335
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -----MASGQ R S--------- Site 1342
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg VATPGQGTDR V Q--------- Site 1347
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---MCTVVDP R I--------- Site 1347
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------M R S--------- Site 26
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---MKIPNIG N V--------- Site 1347
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa TSDTSNFNDN I S--------- Site 1337
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---MEKDGLC R A--------- Site 1347
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep VRKEGFFTVP P E--------- Site 1339
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac KRDNNFYSVE I G--------- Site 1341
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. TRKRGFYKQD I N--------- Site 1341
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO SQAKKFGDGD P F--------- Site 1349
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GSGGGGVPAV P S--------- Site 1332
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha KVDNQFYSVE V G--------- Site 1341
Saccharomyces.cerevisiae.CDK1 --------MS G E--------- Site 702
Lodderomyces.elongisporus.IME2 GSPQPPQSPK N L--------- Site 1342
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen KERPTFYRQE V N--------- Site 1341
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un RSRQSSRRAK S V--------- Site 1331
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---MKIPNIG N V--------- Site 1347
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. RTVVKGHSNP R S--------- Site 1345
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D QERRIQELDQ T V--------- Site 1347
Homo.sapiens.CLK4..Dual.specificity.protein.kinase RSKSHRRKRS R S--------- Site 1330
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U TSKNSGSNSE G D--------- Site 1333
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen VATVGQGPER S Q--------- Site 1347
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 PIREGEVAHE G D--------- Site 1343
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro DPMHLYRARR D K--------- Site 1342
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d GIAARGVDVR S R--------- Site 1347
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi YGQPACFQQQ Q H--------- Site 1322
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen VATPGQGPDR P Q--------- Site 1347
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable RRRPTQGERG P G--------- Site 1342
Aspergillus.fumigatus.IME2 SRVPATTSMA T L--------- Site 1347
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan FKVKLTGERE R V--------- Site 1347
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha TRRRGFYRQE L N--------- Site 1341
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S PQKQQQVPQI P T--------- Site 1324
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ATSKNSGSNS E G--------- Site 1332
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina RRTEGVGPGV P G--------- Site 1335
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d IRIPDGYLEK L Q--------- Site 678
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. IRKEGFFTVP P E--------- Site 1339
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S TAQHQHYTVE V G--------- Site 1341
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. SSRKGFYRIE I N--------- Site 1341
Candida.glabrata.IME2 DSPPSTIPLK S M--------- Site 1347
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 TTNTVFTGKQ P K--------- Site 1336
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P EQPEQAPARQ I S--------- Site 1344
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -----MATIQ S E--------- Site 1347
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ASSSGSKAEF I V--------- Site 1347
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LTRMSRRASL S D--------- Site 699
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara RSRQSSRRAK S V--------- Site 1331
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ETARDGSTGE V K--------- Site 1347
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD MARVGRPARE D V--------- Site 1347
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR SVATDGVDQQ V E--------- Site 1348
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. LRGDGFFEVP A A--------- Site 1339
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci RSQQSSKRSS R S--------- Site 1330
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos KKERKVYNDG Y D--------- Site 1333
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act VAAKNLALLK A R--------- Site 1339
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. QERPTFYRQE L N--------- Site 1341
Lachancea.thermotolerans.SKY1 KNEESLRDYK P G--------- Site 1335
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -MAEKFESLM N I--------- Site 1342
Dictyostelium.discoideum.CDK1 ------MESD G G--------- Site 1347
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. PARKGFYRQE V T--------- Site 1341
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U TTKSSSSNGE G D--------- Site 1333
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. HRPREYWDYE S H--------- Site 1341
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --------ME A F--------- Site 1347
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. KRPRSNSDSF Q E--------- Site 1330
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---MSSEDID K H--------- Site 1346
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos KKERKVYNDG Y D--------- Site 1333
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen VATPGQGPDR P Q--------- Site 1347
Drosophila.melanogaster.GSK3H..Putative.glycogen.s VATNAFGADV M S--------- Site 1347
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD PKPAKKLPPV V D--------- Site 1327
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 DNPPFYIPLK N I--------- Site 1347
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci HSKSHRRKRS R S--------- Site 1330
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a GAGPEMVRGQ V F--------- Site 1345
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. KRPRSNSDCF Q E--------- Site 1330
Cryptococcus.neoformans.IME2 RRDRGNRMTD P D--------- Site 1333
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -----MSTIQ S E--------- Site 1347
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote DEQEDPNDYC K G--------- Site 1336
Candida.lusitaniae.IME2 FFFILFLLHS L P--------- Site 1330
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TTKSSSSSGE G D--------- Site 1333
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A KTQQERAKVE D L--------- Site 1350
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca QRPREYWDYE S H--------- Site 1341
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a VVAKNLALLK A R--------- Site 1339
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 NDPPKNIPLK S L--------- Site 1347
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec SYSRSHHRRS R K--------- Site 1326
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ----MAVDVK S R--------- Site 1347
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. KVRRHSSPSS P T--------- Site 1341
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly NPNESGHTVT T G--------- Site 1339
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS PPEIKEEMIQ L Y--------- Site 1341
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ----MALDVK S R--------- Site 1347
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -MAKQYDSVE C P--------- Site 1343
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ATSKNSGSNS E G--------- Site 1332
Acyrthosiphon.pisum.CDK1 FVKEGPTKNV S I--------- Site 1347
Candida.tropicalis.CDK1 DSPPKNLTVH S Y--------- Site 1347
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin FKMKTQIERT K V--------- Site 1347
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TAPRITRDKD G N--------- Site 1330
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR QRPREYWDYE S Y--------- Site 1341
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de IRLPEGYLEK L T--------- Site 684
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 IRPKDYWDYE S L--------- Site 1341
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d IRIPDGYLEK L Q--------- Site 678
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ARRRGFYRQE L N--------- Site 1341
Candida.albicans.SSN3..Serine.threonine.protein.ki ILTLGPFKHR K D--------- Site 1341
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF SGDLGRYKHV L G--------- Site 1334
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TATEGPPPDR T K--------- Site 1347
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ESRVEFSREE I N--------- Site 1341
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de VVPKLHFVGC S H--------- Site 1347
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei HRPRDYWDYE S H--------- Site 1341
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TSKQSTASGD G D--------- Site 1333
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PTEGDYVPDS P A--------- Site 1325
Candida.dubliniensis.IME2 DSPPKHLTVH S Y--------- Site 1347
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a KSDGQFYSVQ V A--------- Site 1341
Aspergillus.niger.IME2 SLSRGAAPTS V A--------- Site 1345
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge NQSYVFYRQE L N--------- Site 1341
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. KVRRHSSPSS P T--------- Site 1341
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein HRPREYWDYE S H--------- Site 1341
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty SGNQPHYDSH V N--------- Site 1289
Schizosaccharomyces.japonicus.IME2 SKEKSVTTCT K L--------- Site 1347
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. HVPENYYSVT I G--------- Site 1341
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P LRMGEVIRER V Q--------- Site 1339
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE MNCGGPRPAA L T--------- Site 1347
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. SVATDGVDQQ V E--------- Site 1348
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. PARSGFYRQE V T--------- Site 1341
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ERPQEYWDYE Q G--------- Site 1340
Kluyveromyces.waltii.IME2 SNPPFYIPVK P I--------- Site 1347
Debaryomyces.hansenii.SKY1 YVPGGYHTCY I G--------- Site 1343
Saccharomyces.cerevisiae.IME2 SGSEFSVPPD V D--------- Site 1336
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -----MEKDS L A--------- Site 1347
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein LRSREYWDYE A H--------- Site 1341
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -MAEKFESLM N I--------- Site 1342
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---MEKDSLS R A--------- Site 1347
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST IKTKERTIHK R V--------- Site 1329
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk LPRKGYYTQE V N--------- Site 1341
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act KREKEYYSID V G--------- Site 1341
Candida.albicans.IME2 DSPPKHLTVH S Y--------- Site 1347
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -------MSK E M--------- Site 1347
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k NKEKQYFSSL R S--------- Site 1340
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. QERPTFYRQE L N--------- Site 1341
Kluyveromyces.lactis.IME2 NNPPFYIPLK N I--------- Site 1347
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina VAAKNLALLK A R--------- Site 1339
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. KVDNQFYSVE V G--------- Site 1341
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. GPRAGFYRQE L N--------- Site 1341
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 RILKESRPEI I V--------- Site 1347
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. GPRAGFYRQE L N--------- Site 1341
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U PSPGRGSPME A I--------- Site 1347
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SRSQSSLEDE V D--------- Site 680
Neurospora.crassa.IME2 GSSHGIGSGQ A L--------- Site 1347
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th STTTTPTSTS P T--------- Site 1248
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 --MAVPNDMK S I--------- Site 1347
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar LWGEGYFEVP A S--------- Site 1339
Ashbya.gossypii.IME2 NNPPFYIPLK P V--------- Site 1347
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi STPYSQLARL Q Q--------- Site 1319
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos AKKRHGVIGG P N--------- Site 1328
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p HPPPTIDPND P V--------- Site 1347
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---MNITEVE E H--------- Site 1346
Schizosaccharomyces.pombe.b.IME2 MSNESIYSVL D L--------- Site 1342
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AAGPEMVRGQ V F--------- Site 1345
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GSKQNCTSGE G D--------- Site 1333
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch KQRSNSRTRA L S--------- Site 1330
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -------MEL R V--------- Site 1347
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac KRDNNFYSVE I G--------- Site 1341
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 HPDIQPVTED R R--------- Site 1340
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil KNTIGSVHGK A P--------- Site 1322
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K QEMDDLYDKV P Q--------- Site 1346
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly EKVQDGVTGE T R--------- Site 1347
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ETARDGSTGE V K--------- Site 1347
Species Residue at Site 605
in 'muscle'
msaprobs

The residue for every species at site 605 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro VPMRTETDLQ Q Q--------- Site 1317
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AQVQAAAAAT V K--------- Site 1335
Scheffersomyces.stipitis.SKY1 YVPGGYHTCY I G--------- Site 1343
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:45, November 16th 2019
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