cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 603 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 603 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 603 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 603 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 NGRSLKEVIK C TAI------- Site 1345
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD NNNEDEGTKD Y KQG------- Site 1334
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge VLSHGGRFIQ Y NIF------- Site 1339
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------MENR N SSK------- Site 1345
Candida.guilliermondii.IME2 KMLPQRSNLH D KTP------- Site 1330
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------M D HVV------- Site 26
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g KVVTDGTTGE K KTI------- Site 1347
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 KMRILKESRP E IIV------- Site 1345
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 GTLPPSLHVS S NLN------- Site 1323
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho YDFKVKLSSE R ERV------- Site 1345
Schizosaccharomyces.octosporus.b.IME2 -MSKEIPFSS L NLK------- Site 1341
Candida.albicans.MAPK3..Extracellular.signal.regul NAAATTSSSP R QVS------- Site 1342
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. NVIRPKDYWD Y ESL------- Site 1339
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 AQKRNNGFFD K TAE------- Site 677
Suberites.domuncula.JNK..Stress.activated.protein. --MSSSDYYS Q RVG------- Site 1339
Homo.sapiens.CLK3..Dual.specificity.protein.kinase SSRSQQSSKR S SRS------- Site 1328
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci KSHRRKRSRS V EDD------- Site 1332
Homo.sapiens.CLK2..Dual.specificity.protein.kinase SSQHSSRRAK S VED------- Site 1331
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos LEAKKLDTAP E KFS------- Site 1326
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TVTTKSSSSS G EGD------- Site 1331
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------MSFI C IPM------- Site 1345
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. NSLRSREYWD Y EAH------- Site 1339
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM SVVNGTGSTE V PQS------- Site 1333
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------M D RIV------- Site 26
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------M D LRI------- Site 26
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH SEGEEEGFDA Y RKG------- Site 1333
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d KPLSRMSRRA S LSD------- Site 697
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ADGHKHERPR S EGH------- Site 1323
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET KSKVDNQFYS V EVG------- Site 1339
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U KSKVDNQFYS V EVG------- Site 1339
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. SLIRKKGFYK Q DVN------- Site 1339
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo APAQVQAAAA A TVK------- Site 1333
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 DDDEQEDPND Y CKG------- Site 1334
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RSKRDSNFSV F EIG------- Site 1339
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d KTSAVSSQAN S QPPVQVSVKT Site 625
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. DAADDRSYKE - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G LNAADAADER S RKE------- Site 1345
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 KMRILKESRP E IIV------- Site 1345
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------M E PRV------- Site 26
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PSKRSSSGAD G DYQ------- Site 1335
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C NVIRPKDYWD Y ESL------- Site 1339
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl VAPAQVQAAA V KAH------- Site 1336
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TTGSKQNCTT G EGD------- Site 1331
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O SALTEGDYVP D SPA------- Site 1323
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -----MKIPD I GNV------- Site 1345
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SSHSSRRAKS V EDD------- Site 1332
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O SALTEGDYVP D SPA------- Site 1323
Naegleria.gruberi.LF4 IDMCDEGHSD D EFG------- Site 1329
Saccharomyces.bayanus.IME2 SSSGSEFSIP P DVD------- Site 1334
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. NSLRSREYWD Y EAH------- Site 1339
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a TARSRPGYFR Q EIN------- Site 1339
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th NNNSNNNYNN N TTT------- Site 1311
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos KKVLNHGYDD D NHD------- Site 1336
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos LNAKKRQGMT G GPN------- Site 1326
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -----MKIPN I GNV------- Site 1345
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -----MCAAE V DRH------- Site 1344
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific LSCQTPNYRQ P NPN------- Site 1287
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos LEAKKLNVVP E KFS------- Site 1326
Aspergillus.nidulans.IME2 YEHPSRGLTP T SMA------- Site 1343
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi GIKRDIEELC E AVP------- Site 1343
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se KNQQKQQQVQ Q IPT------- Site 1322
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. KSKVDNQFYS V EVG------- Site 1339
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. KIRDDREMEA T VVD------- Site 1322
Penicillium.marneffei.IME2 MAISHEYSLK G TSH------- Site 1340
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen SQKARPTFYR Q ELN------- Site 1339
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --MAEKGDCI A SVY------- Site 1341
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH SFADMQDNWD D IEG------- Site 1335
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr KEYERENVDT F EAS------- Site 1268
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de TLSSQTNSQP P VQV---SMKT Site 628
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GGGGSSTFSP I VLT------- Site 1338
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d KCIRKEGFFT V PPE------- Site 1337
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin KSKVDNQFYS V EVG------- Site 1339
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DSKCDSQFYS V QVA------- Site 1339
Homo.sapiens.CLK1..Dual.specificity.protein.kinase SHRRSHGKSH R RKR------- Site 1325
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis SLKKNEQNFK L AGV------- Site 1331
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 KMRILKESRP E IIV------- Site 1345
Candida.parapsilosis.IME2 YNDSPPKHVT V HSY------- Site 1345
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TVVATLGQGP E RSQ------- Site 1345
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. DSKCDSQFYS V QVA------- Site 1339
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki NTHRPREYWD Y ESH------- Site 1339
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U SHQSHSKSHR R KRS------- Site 1326
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --MAEKGDCI A SVY------- Site 1341
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ADIRLPEGYL E KLT------- Site 682
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. NTHRPREYWD Y ESH------- Site 1339
Yarrowia.lipolytica.SSN3..Serine.threonine.protein SYSRMLGGGT N PFA------- Site 1332
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. SSSVKCKFRK E EVN------- Site 1339
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos KKVLNHGYDD D NHD------- Site 1336
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE NPSRPREYWD Y EAH------- Site 1339
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSSSKPRS N KFD------- Site 1338
Candida.orthopsilosis.IME2 YNDSPPKHVT V HSY------- Site 1345
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------MALD V KSR------- Site 1345
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str STSVPENYYV V PIG------- Site 1339
Debaryomyces.hansenii.IME2 DINNPPSGIP L KSF------- Site 1345
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati SNKPLQNPAT A EIF------- Site 1318
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin NQASTRSLWS Q QQQ------- Site 691
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---MPTDISP E RDL------- Site 1345
Caenorhabditis.briggsae.CDK1 AIRKNDMNYT - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO NAHKPDEYWD Y ENY------- Site 1339
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos PNAKKRQGVI G GPN------- Site 1326
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -----MDKDG T NLA------- Site 1345
Monosiga.brevicollis.CDK1 ---------- - MAL-------  
Saccharomyces.cerevisiae.SKY1 DERNEESLKD Y RPG------- Site 1333
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------MAS G QRS------- Site 1340
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg TVVATPGQGT D RVQ------- Site 1345
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -----MCTVV D PRI------- Site 1345
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - MRS-------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -----MKIPN I GNV------- Site 1345
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PPTSDTSNFN D NIS------- Site 1335
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -----MEKDG L CRA------- Site 1345
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep KCVRKEGFFT V PPE------- Site 1337
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RSKRDNNFYS V EIG------- Site 1339
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. SLTRKRGFYK Q DIN------- Site 1339
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO KMSQAKKFGD G DPF------- Site 1347
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri NGGSGGGGVP A VPS------- Site 1330
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha KSKVDNQFYS V EVG------- Site 1339
Saccharomyces.cerevisiae.CDK1 ---------- M SGE------- Site 19
Lodderomyces.elongisporus.IME2 KIGSPQPPQS P KNL------- Site 1340
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen SQKERPTFYR Q EVN------- Site 1339
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un SSRSRQSSRR A KSV------- Site 1329
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -----MKIPN I GNV------- Site 1345
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. TRRTVVKGHS N PRS------- Site 1343
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D HAQERRIQEL D QTV------- Site 1345
Homo.sapiens.CLK4..Dual.specificity.protein.kinase QSRSKSHRRK R SRS------- Site 1328
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U TATSKNSGSN S EGD------- Site 1331
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen TVVATVGQGP E RSQ------- Site 1345
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 MDPIREGEVA H EGD------- Site 1341
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro IMDPMHLYRA R RDK------- Site 1340
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d MEGIAARGVD V RSR------- Site 1345
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi TPYGQPACFQ Q QQH------- Site 1320
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TVVATPGQGP D RPQ------- Site 1345
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SNRRRPTQGE R GPG------- Site 1340
Aspergillus.fumigatus.IME2 YPSRVPATTS M ATL------- Site 1345
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan YDFKVKLTGE R ERV------- Site 1345
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha NFTRRRGFYR Q ELN------- Site 1339
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S KNPQKQQQVP Q IPT------- Site 1322
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma STATSKNSGS N SEG------- Site 1330
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina EPRRTEGVGP G VPG------- Site 1333
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ADIRIPDGYL E KLQ------- Site 676
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. KCIRKEGFFT V PPE------- Site 1337
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S MTTAQHQHYT V EVG------- Site 1339
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. HASSRKGFYR I EIN------- Site 1339
Candida.glabrata.IME2 DLDSPPSTIP L KSM------- Site 1345
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 TPTTNTVFTG K QPK------- Site 1334
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P NIEQPEQAPA R QIS------- Site 1342
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -------MAT I QSE------- Site 1345
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -MASSSGSKA E FIV------- Site 1345
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d KPLTRMSRRA S LSD------- Site 697
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SSRSRQSSRR A KSV------- Site 1329
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IKETARDGST G EVK------- Site 1345
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --MARVGRPA R EDV------- Site 1345
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR VASVATDGVD Q QVE------- Site 1346
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. RRLRGDGFFE V PAA------- Site 1337
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci SSRSQQSSKR S SRS------- Site 1328
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos SHKKERKVYN D GYD------- Site 1331
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ASVAAKNLAL L KAR------- Site 1337
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. MSQERPTFYR Q ELN------- Site 1339
Lachancea.thermotolerans.SKY1 DEKNEESLRD Y KPG------- Site 1333
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---MAEKFES L MNI------- Site 1340
Dictyostelium.discoideum.CDK1 --------ME S DGG------- Site 702
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. PPPARKGFYR Q EVT------- Site 1339
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U TVTTKSSSSN G EGD------- Site 1331
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. NTHRPREYWD Y ESH------- Site 1339
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- M EAF------- Site 19
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. KSKRPRSNSD S FQE------- Site 1328
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -----MSSED I DKH------- Site 1344
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos SHKKERKVYN D GYD------- Site 1331
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TVVATPGQGP D RPQ------- Site 1345
Drosophila.melanogaster.GSK3H..Putative.glycogen.s TVVATNAFGA D VMS------- Site 1345
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD RYPKPAKKLP P VVD------- Site 1325
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 DLDNPPFYIP L KNI------- Site 1345
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci QSHSKSHRRK R SRS------- Site 1328
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AAGAGPEMVR G QVF------- Site 1343
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. KSKRPRSNSD C FQE------- Site 1328
Cryptococcus.neoformans.IME2 VERRDRGNRM T DPD------- Site 1331
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -------MST I QSE------- Site 1345
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote DDDEQEDPND Y CKG------- Site 1334
Candida.lusitaniae.IME2 DSFFFILFLL H SLP------- Site 1328
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TVTTKSSSSS G EGD------- Site 1331
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A KMKTQQERAK V EDL------- Site 1348
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca NTQRPREYWD Y ESH------- Site 1339
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ASVVAKNLAL L KAR------- Site 1337
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 DLNDPPKNIP L KSL------- Site 1345
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec RSSYSRSHHR R SRK------- Site 1324
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------MAVD V KSR------- Site 1345
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. SPKVRRHSSP S SPT------- Site 1339
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly DGNPNESGHT V TTG------- Site 1337
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS DIPPEIKEEM I QLY------- Site 1339
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------MALD V KSR------- Site 1345
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---MAKQYDS V ECP------- Site 1341
Homo.sapiens.HIPK2..Homeodomain.interacting.protei STATSKNSGS N SEG------- Site 1330
Acyrthosiphon.pisum.CDK1 RQFVKEGPTK N VSI------- Site 1345
Candida.tropicalis.CDK1 DCDSPPKNLT V HSY------- Site 1345
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin YDFKMKTQIE R TKV------- Site 1345
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G KPTAPRITRD K DGN------- Site 1328
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR NSQRPREYWD Y ESY------- Site 1339
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ADIRLPEGYL E KLT------- Site 682
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 NVIRPKDYWD Y ESL------- Site 1339
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ADIRIPDGYL E KLQ------- Site 676
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA NIARRRGFYR Q ELN------- Site 1339
Candida.albicans.SSN3..Serine.threonine.protein.ki NSILTLGPFK H RKD------- Site 1339
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF RRSGDLGRYK H VLG------- Site 1332
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SVTATEGPPP D RTK------- Site 1345
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -MESRVEFSR E EIN------- Site 1339
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de LDVVPKLHFV G CSH------- Site 1345
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei NTHRPRDYWD Y ESH------- Site 1339
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TGTSKQSTAS G DGD------- Site 1331
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SAPTEGDYVP D SPA------- Site 1323
Candida.dubliniensis.IME2 DYDSPPKHLT V HSY------- Site 1345
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DSKSDGQFYS V QVA------- Site 1339
Aspergillus.niger.IME2 HHSLSRGAAP T SVA------- Site 1343
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge SSNQSYVFYR Q ELN------- Site 1339
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. SPKVRRHSSP S SPT------- Site 1339
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein NTHRPREYWD Y ESH------- Site 1339
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty SSSGNQPHYD S HVN------- Site 1287
Schizosaccharomyces.japonicus.IME2 GTSKEKSVTT C TKL------- Site 1345
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SIHVPENYYS V TIG------- Site 1339
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P NSLRMGEVIR E RVQ------- Site 1337
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE KNMNCGGPRP A ALT------- Site 1345
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. VASVATDGVD Q QVE------- Site 1346
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. PPPARSGFYR Q EVT------- Site 1339
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ CEERPQEYWD Y EQG------- Site 1338
Kluyveromyces.waltii.IME2 DVSNPPFYIP V KPI------- Site 1345
Debaryomyces.hansenii.SKY1 KDYVPGGYHT C YIG------- Site 1341
Saccharomyces.cerevisiae.IME2 SSSGSEFSVP P DVD------- Site 1334
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -------MEK D SLA------- Site 1345
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein NSLRSREYWD Y EAH------- Site 1339
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---MAEKFES L MNI------- Site 1340
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -----MEKDS L SRA------- Site 1345
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST RYIKTKERTI H KRV------- Site 1327
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk SPLPRKGYYT Q EVN------- Site 1339
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act RNKREKEYYS I DVG------- Site 1339
Candida.albicans.IME2 DYDSPPKHLT V HSY------- Site 1345
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------M S KEM------- Site 26
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k FKNKEKQYFS S LRS------- Site 1338
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. MSQERPTFYR Q ELN------- Site 1339
Kluyveromyces.lactis.IME2 DVNNPPFYIP L KNI------- Site 1345
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ASVAAKNLAL L KAR------- Site 1337
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. KSKVDNQFYS V EVG------- Site 1339
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. MSGPRAGFYR Q ELN------- Site 1339
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 KMRILKESRP E IIV------- Site 1345
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. MSGPRAGFYR Q ELN------- Site 1339
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U LTPSPGRGSP M EAI------- Site 19
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SRSRSQSSLE D EVD------- Site 678
Neurospora.crassa.IME2 PQGSSHGIGS G QAL------- Site 1345
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th STSTTTTPTS T SPT------- Site 1246
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ----MAVPND M KSI------- Site 25
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar QRLWGEGYFE V PAS------- Site 1337
Ashbya.gossypii.IME2 DVNNPPFYIP L KPV------- Site 1345
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PSSTPYSQLA R LQQ------- Site 1317
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos PNAKKRHGVI G GPN------- Site 1326
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p YAHPPPTIDP N DPV------- Site 1345
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -----MNITE V EEH------- Site 1344
Schizosaccharomyces.pombe.b.IME2 --MSNESIYS V LDL------- Site 1340
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AAAAGPEMVR G QVF------- Site 1343
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TTGSKQNCTS G EGD------- Site 1331
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch SSKQRSNSRT R ALS------- Site 1328
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------M E LRV------- Site 26
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac RSKRDNNFYS V EIG------- Site 1339
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 QTHPDIQPVT E DRR------- Site 1338
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GKKNTIGSVH G KAP------- Site 1320
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K IIQEMDDLYD K VPQ------- Site 1344
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly IREKVQDGVT G ETR------- Site 1345
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IKETARDGST G EVK------- Site 1345
Species Residue at Site 603
in 'muscle'
msaprobs

The residue for every species at site 603 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro MVVPMRTETD L QQQ------- Site 1315
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo APAQVQAAAA A TVK------- Site 1333
Scheffersomyces.stipitis.SKY1 KDYVPGGYHT C YIG------- Site 1341
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:54, November 16th 2019
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