cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 602 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 602 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 602 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 602 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 QNGRSLKEVI K CTAI------ Site 1344
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD LNNNEDEGTK D YKQG------ Site 1333
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge AVLSHGGRFI Q YNIF------ Site 1338
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -------MEN R NSSK------ Site 1344
Candida.guilliermondii.IME2 SKMLPQRSNL H DKTP------ Site 1329
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- M DHVV------ Site 19
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g TKVVTDGTTG E KKTI------ Site 1346
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 DKMRILKESR P EIIV------ Site 1344
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NGTLPPSLHV S SNLN------ Site 1322
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho DYDFKVKLSS E RERV------ Site 1344
Schizosaccharomyces.octosporus.b.IME2 --MSKEIPFS S LNLK------ Site 1340
Candida.albicans.MAPK3..Extracellular.signal.regul ANAAATTSSS P RQVS------ Site 1341
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. VNVIRPKDYW D YESL------ Site 1338
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 TAQKRNNGFF D KTAE------ Site 676
Suberites.domuncula.JNK..Stress.activated.protein. ---MSSSDYY S QRVG------ Site 1338
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ASSRSQQSSK R SSRS------ Site 1327
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci GKSHRRKRSR S VEDD------ Site 1331
Homo.sapiens.CLK2..Dual.specificity.protein.kinase SSSQHSSRRA K SVED------ Site 1330
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos GLEAKKLDTA P EKFS------ Site 1325
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TTVTTKSSSS S GEGD------ Site 1330
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -------MSF I CIPM------ Site 1344
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. VNSLRSREYW D YEAH------ Site 1338
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM GSVVNGTGST E VPQS------ Site 1332
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- M DRIV------ Site 19
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- M DLRI------ Site 19
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH GSEGEEEGFD A YRKG------ Site 1332
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d PKPLSRMSRR A SLSD------ Site 696
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. GADGHKHERP R SEGH------ Site 1322
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SKSKVDNQFY S VEVG------ Site 1338
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SKSKVDNQFY S VEVG------ Site 1338
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. MSLIRKKGFY K QDVN------ Site 1338
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AAPAQVQAAA A ATVK------ Site 1332
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 SDDDEQEDPN D YCKG------ Site 1333
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SRSKRDSNFS V FEIG------ Site 1338
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SKTSAVSSQA N SQPPVQVSVK Site 624
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. TDAADDRSYK E ---------- Site 1348
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G SLNAADAADE R SRKE------ Site 1344
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 DKMRILKESR P EIIV------ Site 1344
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- M EPRV------ Site 19
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PPSKRSSSGA D GDYQ------ Site 1334
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C VNVIRPKDYW D YESL------ Site 1338
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AVAPAQVQAA A VKAH------ Site 1335
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ATTGSKQNCT T GEGD------ Site 1330
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O SSALTEGDYV P DSPA------ Site 1322
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ------MKIP D IGNV------ Site 1344
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SSSHSSRRAK S VEDD------ Site 1331
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O SSALTEGDYV P DSPA------ Site 1322
Naegleria.gruberi.LF4 TIDMCDEGHS D DEFG------ Site 1328
Saccharomyces.bayanus.IME2 SSSSGSEFSI P PDVD------ Site 1333
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. VNSLRSREYW D YEAH------ Site 1338
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a MTARSRPGYF R QEIN------ Site 1338
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th NNNNSNNNYN N NTTT------ Site 1310
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos EKKVLNHGYD D DNHD------ Site 1335
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos GLNAKKRQGM T GGPN------ Site 1325
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ------MKIP N IGNV------ Site 1344
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ------MCAA E VDRH------ Site 1343
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SLSCQTPNYR Q PNPN------ Site 1286
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos GLEAKKLNVV P EKFS------ Site 1325
Aspergillus.nidulans.IME2 CYEHPSRGLT P TSMA------ Site 1342
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi SGIKRDIEEL C EAVP------ Site 1342
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se EKNQQKQQQV Q QIPT------ Site 1321
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SKSKVDNQFY S VEVG------ Site 1338
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. MKIRDDREME A TVVD------ Site 1321
Penicillium.marneffei.IME2 -MAISHEYSL K GTSH------ Site 1339
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen MSQKARPTFY R QELN------ Site 1338
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---MAEKGDC I ASVY------ Site 1340
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH RSFADMQDNW D DIEG------ Site 1334
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr VKEYERENVD T FEAS------ Site 1267
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de STLSSQTNSQ P PVQV---SMK Site 627
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GGGGGSSTFS P IVLT------ Site 1337
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d LKCIRKEGFF T VPPE------ Site 1336
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SKSKVDNQFY S VEVG------ Site 1338
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SDSKCDSQFY S VQVA------ Site 1338
Homo.sapiens.CLK1..Dual.specificity.protein.kinase TSHRRSHGKS H RRKR------ Site 1324
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis GSLKKNEQNF K LAGV------ Site 1330
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 DKMRILKESR P EIIV------ Site 1344
Candida.parapsilosis.IME2 YYNDSPPKHV T VHSY------ Site 1344
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TTVVATLGQG P ERSQ------ Site 1344
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. SDSKCDSQFY S VQVA------ Site 1338
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki VNTHRPREYW D YESH------ Site 1338
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U SSHQSHSKSH R RKRS------ Site 1325
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---MAEKGDC I ASVY------ Site 1340
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d PADIRLPEGY L EKLT------ Site 681
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. VNTHRPREYW D YESH------ Site 1338
Yarrowia.lipolytica.SSN3..Serine.threonine.protein GSYSRMLGGG T NPFA------ Site 1331
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. MSSSVKCKFR K EEVN------ Site 1338
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos EKKVLNHGYD D DNHD------ Site 1335
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE VNPSRPREYW D YEAH------ Site 1338
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSSSSKPR S NKFD------ Site 1337
Candida.orthopsilosis.IME2 YYNDSPPKHV T VHSY------ Site 1344
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------MAL D VKSR------ Site 1344
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ASTSVPENYY V VPIG------ Site 1338
Debaryomyces.hansenii.IME2 PDINNPPSGI P LKSF------ Site 1344
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati SSNKPLQNPA T AEIF------ Site 1317
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SNQASTRSLW S QQQQ------ Site 690
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ----MPTDIS P ERDL------ Site 1344
Caenorhabditis.briggsae.CDK1 TAIRKNDMNY T ---------- Site 1348
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO VNAHKPDEYW D YENY------ Site 1338
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos GPNAKKRQGV I GGPN------ Site 1325
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------MDKD G TNLA------ Site 1344
Monosiga.brevicollis.CDK1 ---------- - -MAL------  
Saccharomyces.cerevisiae.SKY1 CDERNEESLK D YRPG------ Site 1332
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --------MA S GQRS------ Site 702
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg TTVVATPGQG T DRVQ------ Site 1344
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ------MCTV V DPRI------ Site 1344
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - -MRS------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ------MKIP N IGNV------ Site 1344
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PPPTSDTSNF N DNIS------ Site 1334
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------MEKD G LCRA------ Site 1344
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep LKCVRKEGFF T VPPE------ Site 1336
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SRSKRDNNFY S VEIG------ Site 1338
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. MSLTRKRGFY K QDIN------ Site 1338
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO QKMSQAKKFG D GDPF------ Site 1346
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri PNGGSGGGGV P AVPS------ Site 1329
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SKSKVDNQFY S VEVG------ Site 1338
Saccharomyces.cerevisiae.CDK1 ---------- - MSGE------  
Lodderomyces.elongisporus.IME2 LKIGSPQPPQ S PKNL------ Site 1339
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen MSQKERPTFY R QEVN------ Site 1338
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un SSSRSRQSSR R AKSV------ Site 1328
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ------MKIP N IGNV------ Site 1344
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ITRRTVVKGH S NPRS------ Site 1342
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D AHAQERRIQE L DQTV------ Site 1344
Homo.sapiens.CLK4..Dual.specificity.protein.kinase HQSRSKSHRR K RSRS------ Site 1327
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U STATSKNSGS N SEGD------ Site 1330
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen TTVVATVGQG P ERSQ------ Site 1344
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -MDPIREGEV A HEGD------ Site 1340
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro TIMDPMHLYR A RRDK------ Site 1339
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -MEGIAARGV D VRSR------ Site 1344
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi STPYGQPACF Q QQQH------ Site 1319
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TTVVATPGQG P DRPQ------ Site 1344
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable GSNRRRPTQG E RGPG------ Site 1339
Aspergillus.fumigatus.IME2 DYPSRVPATT S MATL------ Site 1344
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan GYDFKVKLTG E RERV------ Site 1344
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha MNFTRRRGFY R QELN------ Site 1338
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S EKNPQKQQQV P QIPT------ Site 1321
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma TSTATSKNSG S NSEG------ Site 1329
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina GEPRRTEGVG P GVPG------ Site 1332
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d PADIRIPDGY L EKLQ------ Site 675
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. LKCIRKEGFF T VPPE------ Site 1336
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -MTTAQHQHY T VEVG------ Site 1338
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. AHASSRKGFY R IEIN------ Site 1338
Candida.glabrata.IME2 PDLDSPPSTI P LKSM------ Site 1344
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 GTPTTNTVFT G KQPK------ Site 1333
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P MNIEQPEQAP A RQIS------ Site 1341
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --------MA T IQSE------ Site 1342
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. --MASSSGSK A EFIV------ Site 1344
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d PKPLTRMSRR A SLSD------ Site 696
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SSSRSRQSSR R AKSV------ Site 1328
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IIKETARDGS T GEVK------ Site 1344
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---MARVGRP A REDV------ Site 1344
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR VVASVATDGV D QQVE------ Site 1345
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. LRRLRGDGFF E VPAA------ Site 1336
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ASSRSQQSSK R SSRS------ Site 1327
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos SSHKKERKVY N DGYD------ Site 1330
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act AASVAAKNLA L LKAR------ Site 1336
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -MSQERPTFY R QELN------ Site 1338
Lachancea.thermotolerans.SKY1 CDEKNEESLR D YKPG------ Site 1332
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ----MAEKFE S LMNI------ Site 1339
Dictyostelium.discoideum.CDK1 ---------M E SDGG------ Site 26
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. SPPPARKGFY R QEVT------ Site 1338
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U TTVTTKSSSS N GEGD------ Site 1330
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. VNTHRPREYW D YESH------ Site 1338
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - MEAF------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LKSKRPRSNS D SFQE------ Site 1327
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------MSSE D IDKH------ Site 1343
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos SSHKKERKVY N DGYD------ Site 1330
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TTVVATPGQG P DRPQ------ Site 1344
Drosophila.melanogaster.GSK3H..Putative.glycogen.s TTVVATNAFG A DVMS------ Site 1344
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD TRYPKPAKKL P PVVD------ Site 1324
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 PDLDNPPFYI P LKNI------ Site 1344
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci HQSHSKSHRR K RSRS------ Site 1327
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AAAGAGPEMV R GQVF------ Site 1342
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. FKSKRPRSNS D CFQE------ Site 1327
Cryptococcus.neoformans.IME2 GVERRDRGNR M TDPD------ Site 1330
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --------MS T IQSE------ Site 1342
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote SDDDEQEDPN D YCKG------ Site 1333
Candida.lusitaniae.IME2 FDSFFFILFL L HSLP------ Site 1327
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TTVTTKSSSS S GEGD------ Site 1330
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A FKMKTQQERA K VEDL------ Site 1347
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca VNTQRPREYW D YESH------ Site 1338
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a AASVVAKNLA L LKAR------ Site 1336
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 PDLNDPPKNI P LKSL------ Site 1344
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec QRSSYSRSHH R RSRK------ Site 1323
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -------MAV D VKSR------ Site 1344
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ESPKVRRHSS P SSPT------ Site 1338
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly IDGNPNESGH T VTTG------ Site 1336
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS DDIPPEIKEE M IQLY------ Site 1338
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -------MAL D VKSR------ Site 1344
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ----MAKQYD S VECP------ Site 1340
Homo.sapiens.HIPK2..Homeodomain.interacting.protei TSTATSKNSG S NSEG------ Site 1329
Acyrthosiphon.pisum.CDK1 NRQFVKEGPT K NVSI------ Site 1344
Candida.tropicalis.CDK1 LDCDSPPKNL T VHSY------ Site 1344
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin DYDFKMKTQI E RTKV------ Site 1344
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SKPTAPRITR D KDGN------ Site 1327
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR VNSQRPREYW D YESY------ Site 1338
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de PADIRLPEGY L EKLT------ Site 681
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 VNVIRPKDYW D YESL------ Site 1338
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d PADIRIPDGY L EKLQ------ Site 675
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA MNIARRRGFY R QELN------ Site 1338
Candida.albicans.SSN3..Serine.threonine.protein.ki SNSILTLGPF K HRKD------ Site 1338
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF VRRSGDLGRY K HVLG------ Site 1331
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TSVTATEGPP P DRTK------ Site 1344
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --MESRVEFS R EEIN------ Site 1338
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de KLDVVPKLHF V GCSH------ Site 1344
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei VNTHRPRDYW D YESH------ Site 1338
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TTGTSKQSTA S GDGD------ Site 1330
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SSAPTEGDYV P DSPA------ Site 1322
Candida.dubliniensis.IME2 LDYDSPPKHL T VHSY------ Site 1344
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SDSKSDGQFY S VQVA------ Site 1338
Aspergillus.niger.IME2 DHHSLSRGAA P TSVA------ Site 1342
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge MSSNQSYVFY R QELN------ Site 1338
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ESPKVRRHSS P SSPT------ Site 1338
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein VNTHRPREYW D YESH------ Site 1338
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty TSSSGNQPHY D SHVN------ Site 1286
Schizosaccharomyces.japonicus.IME2 WGTSKEKSVT T CTKL------ Site 1344
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SSIHVPENYY S VTIG------ Site 1338
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P FNSLRMGEVI R ERVQ------ Site 1336
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE MKNMNCGGPR P AALT------ Site 1344
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. VVASVATDGV D QQVE------ Site 1345
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. SPPPARSGFY R QEVT------ Site 1338
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ACEERPQEYW D YEQG------ Site 1337
Kluyveromyces.waltii.IME2 PDVSNPPFYI P VKPI------ Site 1344
Debaryomyces.hansenii.SKY1 LKDYVPGGYH T CYIG------ Site 1340
Saccharomyces.cerevisiae.IME2 SSSSGSEFSV P PDVD------ Site 1333
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --------ME K DSLA------ Site 702
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein VNSLRSREYW D YEAH------ Site 1338
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ----MAEKFE S LMNI------ Site 1339
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------MEKD S LSRA------ Site 1344
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST YRYIKTKERT I HKRV------ Site 1326
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk TSPLPRKGYY T QEVN------ Site 1338
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act NRNKREKEYY S IDVG------ Site 1338
Candida.albicans.IME2 LDYDSPPKHL T VHSY------ Site 1344
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- M SKEM------ Site 19
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k NFKNKEKQYF S SLRS------ Site 1337
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -MSQERPTFY R QELN------ Site 1338
Kluyveromyces.lactis.IME2 PDVNNPPFYI P LKNI------ Site 1344
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina AASVAAKNLA L LKAR------ Site 1336
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SKSKVDNQFY S VEVG------ Site 1338
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -MSGPRAGFY R QELN------ Site 1338
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 DKMRILKESR P EIIV------ Site 1344
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -MSGPRAGFY R QELN------ Site 1338
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ALTPSPGRGS P MEAI------ Site 18
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME RSRSRSQSSL E DEVD------ Site 677
Neurospora.crassa.IME2 TPQGSSHGIG S GQAL------ Site 1344
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th TSTSTTTTPT S TSPT------ Site 1245
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 -----MAVPN D MKSI------ Site 24
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar FQRLWGEGYF E VPAS------ Site 1336
Ashbya.gossypii.IME2 PDVNNPPFYI P LKPV------ Site 1344
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi CPSSTPYSQL A RLQQ------ Site 1316
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos GPNAKKRHGV I GGPN------ Site 1325
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p YYAHPPPTID P NDPV------ Site 1344
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ------MNIT E VEEH------ Site 1343
Schizosaccharomyces.pombe.b.IME2 ---MSNESIY S VLDL------ Site 1339
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AAAAAGPEMV R GQVF------ Site 1342
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ATTGSKQNCT S GEGD------ Site 1330
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch SSSKQRSNSR T RALS------ Site 1327
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- M ELRV------ Site 19
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac SRSKRDNNFY S VEIG------ Site 1338
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TQTHPDIQPV T EDRR------ Site 1337
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil VGKKNTIGSV H GKAP------ Site 1319
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K EIIQEMDDLY D KVPQ------ Site 1343
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly VIREKVQDGV T GETR------ Site 1344
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IIKETARDGS T GEVK------ Site 1344
Species Residue at Site 602
in 'muscle'
msaprobs

The residue for every species at site 602 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro TMVVPMRTET D LQQQ------ Site 1314
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AAPAQVQAAA A ATVK------ Site 1332
Scheffersomyces.stipitis.SKY1 LKDYVPGGYH T CYIG------ Site 1340
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 04:36, November 12th 2019
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