cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 601 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 601 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 601 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 601 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 NQNGRSLKEV I KCTAI----- Site 1343
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD PLNNNEDEGT K DYKQG----- Site 1332
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge PAVLSHGGRF I QYNIF----- Site 1337
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --------ME N RNSSK----- Site 702
Candida.guilliermondii.IME2 PSKMLPQRSN L HDKTP----- Site 1328
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - MDHVV-----  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ETKVVTDGTT G EKKTI----- Site 1345
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 MDKMRILKES R PEIIV----- Site 1343
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 VNGTLPPSLH V SSNLN----- Site 1321
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho MDYDFKVKLS S ERERV----- Site 1343
Schizosaccharomyces.octosporus.b.IME2 ---MSKEIPF S SLNLK----- Site 1339
Candida.albicans.MAPK3..Extracellular.signal.regul AANAAATTSS S PRQVS----- Site 1340
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. DVNVIRPKDY W DYESL----- Site 1337
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ITAQKRNNGF F DKTAE----- Site 675
Suberites.domuncula.JNK..Stress.activated.protein. ----MSSSDY Y SQRVG----- Site 1337
Homo.sapiens.CLK3..Dual.specificity.protein.kinase SASSRSQQSS K RSSRS----- Site 1326
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci HGKSHRRKRS R SVEDD----- Site 1330
Homo.sapiens.CLK2..Dual.specificity.protein.kinase RSSSQHSSRR A KSVED----- Site 1329
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos LGLEAKKLDT A PEKFS----- Site 1324
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TTTVTTKSSS S SGEGD----- Site 1329
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --------MS F ICIPM----- Site 1343
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. EVNSLRSREY W DYEAH----- Site 1337
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM SGSVVNGTGS T EVPQS----- Site 1331
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - MDRIV-----  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - MDLRI-----  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH SGSEGEEEGF D AYRKG----- Site 1331
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LPKPLSRMSR R ASLSD----- Site 695
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. AGADGHKHER P RSEGH----- Site 1321
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET MSKSKVDNQF Y SVEVG----- Site 1337
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U MSKSKVDNQF Y SVEVG----- Site 1337
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -MSLIRKKGF Y KQDVN----- Site 1337
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AAAPAQVQAA A AATVK----- Site 1331
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 GSDDDEQEDP N DYCKG----- Site 1332
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. MSRSKRDSNF S VFEIG----- Site 1337
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d HSKTSAVSSQ A NSQPPVQVSV Site 623
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. LTDAADDRSY K E--------- Site 1347
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G MSLNAADAAD E RSRKE----- Site 1343
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 MDKMRILKES R PEIIV----- Site 1343
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - MEPRV-----  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QPPSKRSSSG A DGDYQ----- Site 1333
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C EVNVIRPKDY W DYESL----- Site 1337
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AAVAPAQVQA A AVKAH----- Site 1334
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TATTGSKQNC T TGEGD----- Site 1329
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O QSSALTEGDY V PDSPA----- Site 1321
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -------MKI P DIGNV----- Site 1343
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci RSSSHSSRRA K SVEDD----- Site 1330
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O QSSALTEGDY V PDSPA----- Site 1321
Naegleria.gruberi.LF4 PTIDMCDEGH S DDEFG----- Site 1327
Saccharomyces.bayanus.IME2 QSSSSGSEFS I PPDVD----- Site 1332
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. EVNSLRSREY W DYEAH----- Site 1337
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -MTARSRPGY F RQEIN----- Site 1337
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th LNNNNSNNNY N NNTTT----- Site 1309
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos KEKKVLNHGY D DDNHD----- Site 1334
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos LGLNAKKRQG M TGGPN----- Site 1324
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -------MKI P NIGNV----- Site 1343
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -------MCA A EVDRH----- Site 1342
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific PSLSCQTPNY R QPNPN----- Site 1285
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos LGLEAKKLNV V PEKFS----- Site 1324
Aspergillus.nidulans.IME2 VCYEHPSRGL T PTSMA----- Site 1341
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi LSGIKRDIEE L CEAVP----- Site 1341
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se YEKNQQKQQQ V QQIPT----- Site 1320
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. MSKSKVDNQF Y SVEVG----- Site 1337
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. DMKIRDDREM E ATVVD----- Site 1320
Penicillium.marneffei.IME2 --MAISHEYS L KGTSH----- Site 1338
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -MSQKARPTF Y RQELN----- Site 1337
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ----MAEKGD C IASVY----- Site 1339
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH TRSFADMQDN W DDIEG----- Site 1333
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr DVKEYERENV D TFEAS----- Site 1266
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de TSTLSSQTNS Q PPVQV---SM Site 626
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GGGGGGSSTF S PIVLT----- Site 1336
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d RLKCIRKEGF F TVPPE----- Site 1335
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin MSKSKVDNQF Y SVEVG----- Site 1337
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a MSDSKCDSQF Y SVQVA----- Site 1337
Homo.sapiens.CLK1..Dual.specificity.protein.kinase STSHRRSHGK S HRRKR----- Site 1323
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis EGSLKKNEQN F KLAGV----- Site 1329
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 MDKMRILKES R PEIIV----- Site 1343
Candida.parapsilosis.IME2 SYYNDSPPKH V TVHSY----- Site 1343
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen VTTVVATLGQ G PERSQ----- Site 1343
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. MSDSKCDSQF Y SVQVA----- Site 1337
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki DVNTHRPREY W DYESH----- Site 1337
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U CSSHQSHSKS H RRKRS----- Site 1324
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ----MAEKGD C IASVY----- Site 1339
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d LPADIRLPEG Y LEKLT----- Site 680
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. DVNTHRPREY W DYESH----- Site 1337
Yarrowia.lipolytica.SSN3..Serine.threonine.protein VGSYSRMLGG G TNPFA----- Site 1330
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -MSSSVKCKF R KEEVN----- Site 1337
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos KEKKVLNHGY D DDNHD----- Site 1334
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE EVNPSRPREY W DYEAH----- Site 1337
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSSSSSKP R SNKFD----- Site 1336
Candida.orthopsilosis.IME2 SYYNDSPPKH V TVHSY----- Site 1343
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --------MA L DVKSR----- Site 702
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str MASTSVPENY Y VVPIG----- Site 1337
Debaryomyces.hansenii.IME2 PPDINNPPSG I PLKSF----- Site 1343
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati GSSNKPLQNP A TAEIF----- Site 1316
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin VSNQASTRSL W SQQQQ----- Site 689
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -----MPTDI S PERDL----- Site 1343
Caenorhabditis.briggsae.CDK1 MTAIRKNDMN Y T--------- Site 1347
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO DVNAHKPDEY W DYENY----- Site 1337
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos VGPNAKKRQG V IGGPN----- Site 1324
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -------MDK D GTNLA----- Site 1343
Monosiga.brevicollis.CDK1 ---------- - --MAL-----  
Saccharomyces.cerevisiae.SKY1 SCDERNEESL K DYRPG----- Site 1331
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------M A SGQRS----- Site 26
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ITTVVATPGQ G TDRVQ----- Site 1343
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -------MCT V VDPRI----- Site 1343
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - --MRS-----  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -------MKI P NIGNV----- Site 1343
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PPPPTSDTSN F NDNIS----- Site 1333
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -------MEK D GLCRA----- Site 1343
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep RLKCVRKEGF F TVPPE----- Site 1335
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac MSRSKRDNNF Y SVEIG----- Site 1337
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -MSLTRKRGF Y KQDIN----- Site 1337
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO RQKMSQAKKF G DGDPF----- Site 1345
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri CPNGGSGGGG V PAVPS----- Site 1328
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha MSKSKVDNQF Y SVEVG----- Site 1337
Saccharomyces.cerevisiae.CDK1 ---------- - -MSGE-----  
Lodderomyces.elongisporus.IME2 PLKIGSPQPP Q SPKNL----- Site 1338
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -MSQKERPTF Y RQEVN----- Site 1337
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un QSSSRSRQSS R RAKSV----- Site 1327
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -------MKI P NIGNV----- Site 1343
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. VITRRTVVKG H SNPRS----- Site 1341
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TAHAQERRIQ E LDQTV----- Site 1343
Homo.sapiens.CLK4..Dual.specificity.protein.kinase SHQSRSKSHR R KRSRS----- Site 1326
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U TSTATSKNSG S NSEGD----- Site 1329
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen VTTVVATVGQ G PERSQ----- Site 1343
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --MDPIREGE V AHEGD----- Site 702
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GTIMDPMHLY R ARRDK----- Site 1338
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --MEGIAARG V DVRSR----- Site 702
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi LSTPYGQPAC F QQQQH----- Site 1318
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen VTTVVATPGQ G PDRPQ----- Site 1343
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable PGSNRRRPTQ G ERGPG----- Site 1338
Aspergillus.fumigatus.IME2 YDYPSRVPAT T SMATL----- Site 1343
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan MGYDFKVKLT G ERERV----- Site 1343
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -MNFTRRRGF Y RQELN----- Site 1337
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S YEKNPQKQQQ V PQIPT----- Site 1320
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma TTSTATSKNS G SNSEG----- Site 1328
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina GGEPRRTEGV G PGVPG----- Site 1331
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d LPADIRIPDG Y LEKLQ----- Site 674
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. RLKCIRKEGF F TVPPE----- Site 1335
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --MTTAQHQH Y TVEVG----- Site 1337
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. MAHASSRKGF Y RIEIN----- Site 1337
Candida.glabrata.IME2 PPDLDSPPST I PLKSM----- Site 1343
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 WGTPTTNTVF T GKQPK----- Site 1332
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -MNIEQPEQA P ARQIS----- Site 1340
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------M A TIQSE----- Site 26
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---MASSSGS K AEFIV----- Site 1343
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LPKPLTRMSR R ASLSD----- Site 695
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara RSSSRSRQSS R RAKSV----- Site 1327
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RIIKETARDG S TGEVK----- Site 1343
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ----MARVGR P AREDV----- Site 1343
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR MVVASVATDG V DQQVE----- Site 1344
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. RLRRLRGDGF F EVPAA----- Site 1335
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci SASSRSQQSS K RSSRS----- Site 1326
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos DSSHKKERKV Y NDGYD----- Site 1329
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act TAASVAAKNL A LLKAR----- Site 1335
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --MSQERPTF Y RQELN----- Site 1337
Lachancea.thermotolerans.SKY1 SCDEKNEESL R DYKPG----- Site 1331
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -----MAEKF E SLMNI----- Site 1338
Dictyostelium.discoideum.CDK1 ---------- M ESDGG----- Site 19
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. SSPPPARKGF Y RQEVT----- Site 1337
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U TTTVTTKSSS S NGEGD----- Site 1329
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. DVNTHRPREY W DYESH----- Site 1337
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - -MEAF-----  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. KLKSKRPRSN S DSFQE----- Site 1326
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -------MSS E DIDKH----- Site 1342
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos DSSHKKERKV Y NDGYD----- Site 1329
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen VTTVVATPGQ G PDRPQ----- Site 1343
Drosophila.melanogaster.GSK3H..Putative.glycogen.s VTTVVATNAF G ADVMS----- Site 1343
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD GTRYPKPAKK L PPVVD----- Site 1323
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 PPDLDNPPFY I PLKNI----- Site 1343
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci SHQSHSKSHR R KRSRS----- Site 1326
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AAAAGAGPEM V RGQVF----- Site 1341
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. KFKSKRPRSN S DCFQE----- Site 1326
Cryptococcus.neoformans.IME2 GGVERRDRGN R MTDPD----- Site 1329
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------M S TIQSE----- Site 26
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote GSDDDEQEDP N DYCKG----- Site 1332
Candida.lusitaniae.IME2 WFDSFFFILF L LHSLP----- Site 1326
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TTTVTTKSSS S SGEGD----- Site 1329
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A EFKMKTQQER A KVEDL----- Site 1346
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca DVNTQRPREY W DYESH----- Site 1337
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a TAASVVAKNL A LLKAR----- Site 1335
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 PPDLNDPPKN I PLKSL----- Site 1343
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec HQRSSYSRSH H RRSRK----- Site 1322
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --------MA V DVKSR----- Site 702
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. KESPKVRRHS S PSSPT----- Site 1337
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly HIDGNPNESG H TVTTG----- Site 1335
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS IDDIPPEIKE E MIQLY----- Site 1337
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --------MA L DVKSR----- Site 702
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -----MAKQY D SVECP----- Site 1339
Homo.sapiens.HIPK2..Homeodomain.interacting.protei TTSTATSKNS G SNSEG----- Site 1328
Acyrthosiphon.pisum.CDK1 KNRQFVKEGP T KNVSI----- Site 1343
Candida.tropicalis.CDK1 PLDCDSPPKN L TVHSY----- Site 1343
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin MDYDFKMKTQ I ERTKV----- Site 1343
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G DSKPTAPRIT R DKDGN----- Site 1326
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR DVNSQRPREY W DYESY----- Site 1337
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LPADIRLPEG Y LEKLT----- Site 680
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 EVNVIRPKDY W DYESL----- Site 1337
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d LPADIRIPDG Y LEKLQ----- Site 674
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA AMNIARRRGF Y RQELN----- Site 1337
Candida.albicans.SSN3..Serine.threonine.protein.ki ASNSILTLGP F KHRKD----- Site 1337
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF MVRRSGDLGR Y KHVLG----- Site 1330
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ITSVTATEGP P PDRTK----- Site 1343
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---MESRVEF S REEIN----- Site 1337
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RKLDVVPKLH F VGCSH----- Site 1343
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei DVNTHRPRDY W DYESH----- Site 1337
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ATTGTSKQST A SGDGD----- Site 1329
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d QSSAPTEGDY V PDSPA----- Site 1321
Candida.dubliniensis.IME2 PLDYDSPPKH L TVHSY----- Site 1343
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a MSDSKSDGQF Y SVQVA----- Site 1337
Aspergillus.niger.IME2 YDHHSLSRGA A PTSVA----- Site 1341
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -MSSNQSYVF Y RQELN----- Site 1337
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. KESPKVRRHS S PSSPT----- Site 1337
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein DVNTHRPREY W DYESH----- Site 1337
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty NTSSSGNQPH Y DSHVN----- Site 1285
Schizosaccharomyces.japonicus.IME2 FWGTSKEKSV T TCTKL----- Site 1343
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. PSSIHVPENY Y SVTIG----- Site 1337
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P AFNSLRMGEV I RERVQ----- Site 1335
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE MMKNMNCGGP R PAALT----- Site 1343
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. MVVASVATDG V DQQVE----- Site 1344
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. SSPPPARSGF Y RQEVT----- Site 1337
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ NACEERPQEY W DYEQG----- Site 1336
Kluyveromyces.waltii.IME2 PPDVSNPPFY I PVKPI----- Site 1343
Debaryomyces.hansenii.SKY1 DLKDYVPGGY H TCYIG----- Site 1339
Saccharomyces.cerevisiae.IME2 QSSSSGSEFS V PPDVD----- Site 1332
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------M E KDSLA----- Site 26
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein EVNSLRSREY W DYEAH----- Site 1337
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -----MAEKF E SLMNI----- Site 1338
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -------MEK D SLSRA----- Site 1343
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST DYRYIKTKER T IHKRV----- Site 1325
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk STSPLPRKGY Y TQEVN----- Site 1337
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act MNRNKREKEY Y SIDVG----- Site 1337
Candida.albicans.IME2 PLDYDSPPKH L TVHSY----- Site 1343
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - MSKEM-----  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ENFKNKEKQY F SSLRS----- Site 1336
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --MSQERPTF Y RQELN----- Site 1337
Kluyveromyces.lactis.IME2 PPDVNNPPFY I PLKNI----- Site 1343
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina TAASVAAKNL A LLKAR----- Site 1335
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. MSKSKVDNQF Y SVEVG----- Site 1337
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --MSGPRAGF Y RQELN----- Site 1337
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 MDKMRILKES R PEIIV----- Site 1343
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --MSGPRAGF Y RQELN----- Site 1337
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U SALTPSPGRG S PMEAI----- Site 17
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SRSRSRSQSS L EDEVD----- Site 676
Neurospora.crassa.IME2 LTPQGSSHGI G SGQAL----- Site 1343
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th STSTSTTTTP T STSPT----- Site 1244
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ------MAVP N DMKSI----- Site 23
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar RFQRLWGEGY F EVPAS----- Site 1335
Ashbya.gossypii.IME2 PPDVNNPPFY I PLKPV----- Site 1343
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ACPSSTPYSQ L ARLQQ----- Site 1315
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos VGPNAKKRHG V IGGPN----- Site 1324
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p VYYAHPPPTI D PNDPV----- Site 1343
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -------MNI T EVEEH----- Site 1342
Schizosaccharomyces.pombe.b.IME2 ----MSNESI Y SVLDL----- Site 1338
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AAAAAAGPEM V RGQVF----- Site 1341
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TATTGSKQNC T SGEGD----- Site 1329
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch QSSSKQRSNS R TRALS----- Site 1326
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - MELRV-----  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac MSRSKRDNNF Y SVEIG----- Site 1337
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 KTQTHPDIQP V TEDRR----- Site 1336
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil FVGKKNTIGS V HGKAP----- Site 1318
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K AEIIQEMDDL Y DKVPQ----- Site 1342
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly EVIREKVQDG V TGETR----- Site 1343
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RIIKETARDG S TGEVK----- Site 1343
Species Residue at Site 601
in 'muscle'
msaprobs

The residue for every species at site 601 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro STMVVPMRTE T DLQQQ----- Site 1313
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AAAPAQVQAA A AATVK----- Site 1331
Scheffersomyces.stipitis.SKY1 DLKDYVPGGY H TCYIG----- Site 1339
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 11:17, November 19th 2019
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