cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 600 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 600 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 600 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 600 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ANQNGRSLKE V IKCTAI---- Site 1342
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD MPLNNNEDEG T KDYKQG---- Site 1331
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge IPAVLSHGGR F IQYNIF---- Site 1336
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------M E NRNSSK---- Site 26
Candida.guilliermondii.IME2 KPSKMLPQRS N LHDKTP---- Site 1327
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - -MDHVV----  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LETKVVTDGT T GEKKTI---- Site 1344
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -MDKMRILKE S RPEIIV---- Site 1342
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 LVNGTLPPSL H VSSNLN---- Site 1320
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -MDYDFKVKL S SERERV---- Site 1342
Schizosaccharomyces.octosporus.b.IME2 ----MSKEIP F SSLNLK---- Site 1338
Candida.albicans.MAPK3..Extracellular.signal.regul AAANAAATTS S SPRQVS---- Site 702
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. TDVNVIRPKD Y WDYESL---- Site 1336
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 KITAQKRNNG F FDKTAE---- Site 674
Suberites.domuncula.JNK..Stress.activated.protein. -----MSSSD Y YSQRVG---- Site 1336
Homo.sapiens.CLK3..Dual.specificity.protein.kinase SSASSRSQQS S KRSSRS---- Site 1325
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci SHGKSHRRKR S RSVEDD---- Site 1329
Homo.sapiens.CLK2..Dual.specificity.protein.kinase SRSSSQHSSR R AKSVED---- Site 1328
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos FLGLEAKKLD T APEKFS---- Site 1323
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TTTTVTTKSS S SSGEGD---- Site 1328
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------M S FICIPM---- Site 26
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. AEVNSLRSRE Y WDYEAH---- Site 1336
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM SSGSVVNGTG S TEVPQS---- Site 1330
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - -MDRIV----  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - -MDLRI----  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH SSGSEGEEEG F DAYRKG---- Site 1330
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d DLPKPLSRMS R RASLSD---- Site 694
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. EAGADGHKHE R PRSEGH---- Site 1320
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET NMSKSKVDNQ F YSVEVG---- Site 1336
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U NMSKSKVDNQ F YSVEVG---- Site 1336
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --MSLIRKKG F YKQDVN---- Site 1336
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AAAAPAQVQA A AAATVK---- Site 1330
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 LGSDDDEQED P NDYCKG---- Site 1331
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -MSRSKRDSN F SVFEIG---- Site 1336
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d THSKTSAVSS Q ANSQPPVQVS Site 622
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. NLTDAADDRS Y KE-------- Site 1346
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -MSLNAADAA D ERSRKE---- Site 1342
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -MDKMRILKE S RPEIIV---- Site 1342
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - -MEPRV----  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO TQPPSKRSSS G ADGDYQ---- Site 1332
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C TEVNVIRPKD Y WDYESL---- Site 1336
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AAAVAPAQVQ A AAVKAH---- Site 1333
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei VTATTGSKQN C TTGEGD---- Site 1328
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PQSSALTEGD Y VPDSPA---- Site 1320
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --------MK I PDIGNV---- Site 1342
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci SRSSSHSSRR A KSVEDD---- Site 1329
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PQSSALTEGD Y VPDSPA---- Site 1320
Naegleria.gruberi.LF4 DPTIDMCDEG H SDDEFG---- Site 1326
Saccharomyces.bayanus.IME2 RQSSSSGSEF S IPPDVD---- Site 1331
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. AEVNSLRSRE Y WDYEAH---- Site 1336
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --MTARSRPG Y FRQEIN---- Site 1336
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th NLNNNNSNNN Y NNNTTT---- Site 1308
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos KKEKKVLNHG Y DDDNHD---- Site 1333
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos FLGLNAKKRQ G MTGGPN---- Site 1323
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --------MK I PNIGNV---- Site 1342
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --------MC A AEVDRH---- Site 702
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific NPSLSCQTPN Y RQPNPN---- Site 1284
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos FLGLEAKKLN V VPEKFS---- Site 1323
Aspergillus.nidulans.IME2 TVCYEHPSRG L TPTSMA---- Site 1340
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi KLSGIKRDIE E LCEAVP---- Site 1340
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se CYEKNQQKQQ Q VQQIPT---- Site 1319
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. NMSKSKVDNQ F YSVEVG---- Site 1336
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. NDMKIRDDRE M EATVVD---- Site 1319
Penicillium.marneffei.IME2 ---MAISHEY S LKGTSH---- Site 1337
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --MSQKARPT F YRQELN---- Site 1336
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -----MAEKG D CIASVY---- Site 1338
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH LTRSFADMQD N WDDIEG---- Site 1332
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ADVKEYEREN V DTFEAS---- Site 1265
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de RTSTLSSQTN S QPPVQV---S Site 625
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep GGGGGGGSST F SPIVLT---- Site 1335
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d IRLKCIRKEG F FTVPPE---- Site 1334
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin NMSKSKVDNQ F YSVEVG---- Site 1336
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -MSDSKCDSQ F YSVQVA---- Site 1336
Homo.sapiens.CLK1..Dual.specificity.protein.kinase HSTSHRRSHG K SHRRKR---- Site 1322
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis AEGSLKKNEQ N FKLAGV---- Site 1328
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -MDKMRILKE S RPEIIV---- Site 1342
Candida.parapsilosis.IME2 LSYYNDSPPK H VTVHSY---- Site 1342
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen KVTTVVATLG Q GPERSQ---- Site 1342
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -MSDSKCDSQ F YSVQVA---- Site 1336
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki TDVNTHRPRE Y WDYESH---- Site 1336
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U HCSSHQSHSK S HRRKRS---- Site 1323
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -----MAEKG D CIASVY---- Site 1338
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d SLPADIRLPE G YLEKLT---- Site 679
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. TDVNTHRPRE Y WDYESH---- Site 1336
Yarrowia.lipolytica.SSN3..Serine.threonine.protein GVGSYSRMLG G GTNPFA---- Site 1329
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --MSSSVKCK F RKEEVN---- Site 1336
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos KKEKKVLNHG Y DDDNHD---- Site 1333
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE AEVNPSRPRE Y WDYEAH---- Site 1336
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSSSSSSK P RSNKFD---- Site 1335
Candida.orthopsilosis.IME2 LSYYNDSPPK H VTVHSY---- Site 1342
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------M A LDVKSR---- Site 26
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -MASTSVPEN Y YVVPIG---- Site 1336
Debaryomyces.hansenii.IME2 VPPDINNPPS G IPLKSF---- Site 1342
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati AGSSNKPLQN P ATAEIF---- Site 1315
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin NVSNQASTRS L WSQQQQ---- Site 688
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ------MPTD I SPERDL---- Site 1342
Caenorhabditis.briggsae.CDK1 -MTAIRKNDM N YT-------- Site 1346
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO TDVNAHKPDE Y WDYENY---- Site 1336
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos FVGPNAKKRQ G VIGGPN---- Site 1323
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --------MD K DGTNLA---- Site 702
Monosiga.brevicollis.CDK1 ---------- - ---MAL----  
Saccharomyces.cerevisiae.SKY1 SSCDERNEES L KDYRPG---- Site 1330
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- M ASGQRS---- Site 19
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg KITTVVATPG Q GTDRVQ---- Site 1342
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --------MC T VVDPRI---- Site 1342
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ---MRS----  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --------MK I PNIGNV---- Site 1342
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa MPPPPTSDTS N FNDNIS---- Site 1332
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --------ME K DGLCRA---- Site 702
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep IRLKCVRKEG F FTVPPE---- Site 1334
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -MSRSKRDNN F YSVEIG---- Site 1336
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --MSLTRKRG F YKQDIN---- Site 1336
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO KRQKMSQAKK F GDGDPF---- Site 1344
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri YCPNGGSGGG G VPAVPS---- Site 1327
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha NMSKSKVDNQ F YSVEVG---- Site 1336
Saccharomyces.cerevisiae.CDK1 ---------- - --MSGE----  
Lodderomyces.elongisporus.IME2 LPLKIGSPQP P QSPKNL---- Site 1337
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --MSQKERPT F YRQEVN---- Site 1336
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un SQSSSRSRQS S RRAKSV---- Site 1326
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --------MK I PNIGNV---- Site 1342
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. EVITRRTVVK G HSNPRS---- Site 1340
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D QTAHAQERRI Q ELDQTV---- Site 1342
Homo.sapiens.CLK4..Dual.specificity.protein.kinase SSHQSRSKSH R RKRSRS---- Site 1325
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U TTSTATSKNS G SNSEGD---- Site 1328
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen KVTTVVATVG Q GPERSQ---- Site 1342
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---MDPIREG E VAHEGD---- Site 701
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GGTIMDPMHL Y RARRDK---- Site 1337
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---MEGIAAR G VDVRSR---- Site 701
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi QLSTPYGQPA C FQQQQH---- Site 1317
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen KVTTVVATPG Q GPDRPQ---- Site 1342
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable GPGSNRRRPT Q GERGPG---- Site 1337
Aspergillus.fumigatus.IME2 SYDYPSRVPA T TSMATL---- Site 1342
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -MGYDFKVKL T GERERV---- Site 1342
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --MNFTRRRG F YRQELN---- Site 1336
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S CYEKNPQKQQ Q VPQIPT---- Site 1319
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ATTSTATSKN S GSNSEG---- Site 1327
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina GGGEPRRTEG V GPGVPG---- Site 1330
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d SLPADIRIPD G YLEKLQ---- Site 673
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. IRLKCIRKEG F FTVPPE---- Site 1334
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---MTTAQHQ H YTVEVG---- Site 1336
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. EMAHASSRKG F YRIEIN---- Site 1336
Candida.glabrata.IME2 PPPDLDSPPS T IPLKSM---- Site 1342
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 LWGTPTTNTV F TGKQPK---- Site 1331
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --MNIEQPEQ A PARQIS---- Site 1339
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- M ATIQSE---- Site 19
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ----MASSSG S KAEFIV---- Site 1342
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d GLPKPLTRMS R RASLSD---- Site 694
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara SRSSSRSRQS S RRAKSV---- Site 1326
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH FRIIKETARD G STGEVK---- Site 1342
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -----MARVG R PAREDV---- Site 1342
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR TMVVASVATD G VDQQVE---- Site 1343
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. LRLRRLRGDG F FEVPAA---- Site 1334
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci SSASSRSQQS S KRSSRS---- Site 1325
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos DDSSHKKERK V YNDGYD---- Site 1328
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act GTAASVAAKN L ALLKAR---- Site 1334
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---MSQERPT F YRQELN---- Site 1336
Lachancea.thermotolerans.SKY1 SSCDEKNEES L RDYKPG---- Site 1330
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ------MAEK F ESLMNI---- Site 1337
Dictyostelium.discoideum.CDK1 ---------- - MESDGG----  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. MSSPPPARKG F YRQEVT---- Site 1336
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U TTTTVTTKSS S SNGEGD---- Site 1328
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. TDVNTHRPRE Y WDYESH---- Site 1336
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - --MEAF----  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. QKLKSKRPRS N SDSFQE---- Site 1325
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --------MS S EDIDKH---- Site 702
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos DDSSHKKERK V YNDGYD---- Site 1328
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen KVTTVVATPG Q GPDRPQ---- Site 1342
Drosophila.melanogaster.GSK3H..Putative.glycogen.s KVTTVVATNA F GADVMS---- Site 1342
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD EGTRYPKPAK K LPPVVD---- Site 1322
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 VPPDLDNPPF Y IPLKNI---- Site 1342
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ASHQSHSKSH R RKRSRS---- Site 1325
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AAAAAGAGPE M VRGQVF---- Site 1340
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. QKFKSKRPRS N SDCFQE---- Site 1325
Cryptococcus.neoformans.IME2 HGGVERRDRG N RMTDPD---- Site 1328
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- M STIQSE---- Site 19
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote LGSDDDEQED P NDYCKG---- Site 1331
Candida.lusitaniae.IME2 FWFDSFFFIL F LLHSLP---- Site 1325
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TTTTVTTKSS S SSGEGD---- Site 1328
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A YEFKMKTQQE R AKVEDL---- Site 1345
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca PDVNTQRPRE Y WDYESH---- Site 1336
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a HTAASVVAKN L ALLKAR---- Site 1334
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 IPPDLNDPPK N IPLKSL---- Site 1342
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec SHQRSSYSRS H HRRSRK---- Site 1321
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------M A VDVKSR---- Site 26
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. GKESPKVRRH S SPSSPT---- Site 1336
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly IHIDGNPNES G HTVTTG---- Site 1334
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NIDDIPPEIK E EMIQLY---- Site 1336
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------M A LDVKSR---- Site 26
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ------MAKQ Y DSVECP---- Site 1338
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ATTSTATSKN S GSNSEG---- Site 1327
Acyrthosiphon.pisum.CDK1 VKNRQFVKEG P TKNVSI---- Site 1342
Candida.tropicalis.CDK1 FPLDCDSPPK N LTVHSY---- Site 1342
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -MDYDFKMKT Q IERTKV---- Site 1342
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G RDSKPTAPRI T RDKDGN---- Site 1325
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ADVNSQRPRE Y WDYESY---- Site 1336
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de SLPADIRLPE G YLEKLT---- Site 679
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 TEVNVIRPKD Y WDYESL---- Site 1336
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d SLPADIRIPD G YLEKLQ---- Site 673
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RAMNIARRRG F YRQELN---- Site 1336
Candida.albicans.SSN3..Serine.threonine.protein.ki MASNSILTLG P FKHRKD---- Site 1336
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF AMVRRSGDLG R YKHVLG---- Site 1329
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA KITSVTATEG P PPDRTK---- Site 1342
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ----MESRVE F SREEIN---- Site 1336
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RRKLDVVPKL H FVGCSH---- Site 1342
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei TDVNTHRPRD Y WDYESH---- Site 1336
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U VATTGTSKQS T ASGDGD---- Site 1328
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PQSSAPTEGD Y VPDSPA---- Site 1320
Candida.dubliniensis.IME2 FPLDYDSPPK H LTVHSY---- Site 1342
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -MSDSKSDGQ F YSVQVA---- Site 1336
Aspergillus.niger.IME2 CYDHHSLSRG A APTSVA---- Site 1340
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --MSSNQSYV F YRQELN---- Site 1336
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. GKESPKVRRH S SPSSPT---- Site 1336
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein TDVNTHRPRE Y WDYESH---- Site 1336
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty PNTSSSGNQP H YDSHVN---- Site 1284
Schizosaccharomyces.japonicus.IME2 KFWGTSKEKS V TTCTKL---- Site 1342
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. EPSSIHVPEN Y YSVTIG---- Site 1336
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P GAFNSLRMGE V IRERVQ---- Site 1334
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE KMMKNMNCGG P RPAALT---- Site 1342
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. TMVVASVATD G VDQQVE---- Site 1343
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. MSSPPPARSG F YRQEVT---- Site 1336
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ KNACEERPQE Y WDYEQG---- Site 1335
Kluyveromyces.waltii.IME2 APPDVSNPPF Y IPVKPI---- Site 1342
Debaryomyces.hansenii.SKY1 EDLKDYVPGG Y HTCYIG---- Site 1338
Saccharomyces.cerevisiae.IME2 RQSSSSGSEF S VPPDVD---- Site 1331
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- M EKDSLA---- Site 19
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein AEVNSLRSRE Y WDYEAH---- Site 1336
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ------MAEK F ESLMNI---- Site 1337
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --------ME K DSLSRA---- Site 702
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST FDYRYIKTKE R TIHKRV---- Site 1324
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk MSTSPLPRKG Y YTQEVN---- Site 1336
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -MNRNKREKE Y YSIDVG---- Site 1336
Candida.albicans.IME2 FPLDYDSPPK H LTVHSY---- Site 1342
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - -MSKEM----  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k KENFKNKEKQ Y FSSLRS---- Site 1335
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---MSQERPT F YRQELN---- Site 1336
Kluyveromyces.lactis.IME2 IPPDVNNPPF Y IPLKNI---- Site 1342
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina HTAASVAAKN L ALLKAR---- Site 1334
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. NMSKSKVDNQ F YSVEVG---- Site 1336
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---MSGPRAG F YRQELN---- Site 1336
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -MDKMRILKE S RPEIIV---- Site 1342
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---MSGPRAG F YRQELN---- Site 1336
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U FSALTPSPGR G SPMEAI---- Site 16
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME RSRSRSRSQS S LEDEVD---- Site 675
Neurospora.crassa.IME2 TLTPQGSSHG I GSGQAL---- Site 1342
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th SSTSTSTTTT P TSTSPT---- Site 1243
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 -------MAV P NDMKSI---- Site 22
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar LRFQRLWGEG Y FEVPAS---- Site 1334
Ashbya.gossypii.IME2 VPPDVNNPPF Y IPLKPV---- Site 1342
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PACPSSTPYS Q LARLQQ---- Site 1314
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos FVGPNAKKRH G VIGGPN---- Site 1323
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p QVYYAHPPPT I DPNDPV---- Site 1342
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --------MN I TEVEEH---- Site 702
Schizosaccharomyces.pombe.b.IME2 -----MSNES I YSVLDL---- Site 1337
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a MAAAAAAGPE M VRGQVF---- Site 1340
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VTATTGSKQN C TSGEGD---- Site 1328
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch SQSSSKQRSN S RTRALS---- Site 1325
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - -MELRV----  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -MSRSKRDNN F YSVEIG---- Site 1336
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TKTQTHPDIQ P VTEDRR---- Site 1335
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil SFVGKKNTIG S VHGKAP---- Site 1317
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K PAEIIQEMDD L YDKVPQ---- Site 1341
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly GEVIREKVQD G VTGETR---- Site 1342
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk FRIIKETARD G STGEVK---- Site 1342
Species Residue at Site 600
in 'muscle'
msaprobs

The residue for every species at site 600 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro TSTMVVPMRT E TDLQQQ---- Site 1312
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AAAAPAQVQA A AAATVK---- Site 1330
Scheffersomyces.stipitis.SKY1 EDLKDYVPGG Y HTCYIG---- Site 1338
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 11:14, November 19th 2019
Questions/Comments? help@phylobot.com