cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 579 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 579 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 579 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 579 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 YL-------- - ----WRTPSM  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD AG-------- - ----SSNKSF  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge PP-------- - ----QMGIEN  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 AM-------- - ----GITEMW  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ----MSDDSH  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 MP-------- - ----NRSNVR  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul AQAQAQAQAQ A QQQQQAAAAA Site 681
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. VM-------- - ----SKARVY  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 VA-------- - ----EQETLE  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase HK-------- - ----RRTRSC  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci RH-------- - ----HTSQHH  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase YRSQRSSRRK H RRRRRRSRTF Site 1307
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos IL-------- - ----GYAELW  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei RT-------- - ----VVGAAA  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. AG-------- - ----SRARVY  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -----MEEFN  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - -----MSCSS  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d QK-------- - ----LQMESP  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. DM-------- - ----LDGLEI  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VS-------- - ----YIAKHY  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VS-------- - ----YIAKHY  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AP-------- - ----GQAPGP  
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 LP-------- - ----EQEEEI  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PPSQPAFSQV P ASSTSTLPPS Site 601
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -------MSL  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AT-------- - ----SGGHAN  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C AM-------- - ----SKARVY  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AP-------- - ----GQAPGP  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei NM-------- - ----GNPVTV  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O RDSGESEEAE E ----EVGEGT Site 702
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci YRSQRSSRRK H RRRRRRSRTF Site 1308
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O RDSGESEEAE E ----EVGEGT Site 702
Naegleria.gruberi.LF4 ---------- - ----MNNATG  
Saccharomyces.bayanus.IME2 ---------- - ----MVEKRC  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. AG-------- - ----SRARVY  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th SN-------- - ----NNNNNN  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos AP-------- - ----PQDSST  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos IF-------- - ----SYPEIY  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific RT-------- - ----PAPLRL  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos IL-------- - ----GYSELW  
Aspergillus.nidulans.IME2 ---------- - ---------M  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi LK-------- - ----KYEQSV  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QLVGEMALVS H THPAAVGSTT Site 1298
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VS-------- - ----YIAKHY  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. VD-------- - ----RLPEEM  
Penicillium.marneffei.IME2 ---------- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ----------  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH NT-------- - ----GKGIST  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr SPQSSTRSRS P SPDDILERVA Site 1244
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de QPPFSQVPVS S TSILPSSPHP Site 604
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep NQ-------- - ----NGGGSG  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d EV-------- - ----DLESDQ  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VS-------- - ----YIAKHY  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase YK-------- - ----SKHRIH  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----QRDRFQ  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - -----MPNMA  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen VK-------- - ----LGRDSG  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki VP-------- - ----SRARVY  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U HK-------- - ----RKHKRH  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d TE-------- - ----DINKRL  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. VP-------- - ----SRARVY  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----MSNYRR  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos AP-------- - ----PQDSSN  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE IP-------- - ----SRARVY  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD KK-------- - ----TTTTTS  
Candida.orthopsilosis.IME2 ---------- - -----MSNIA  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 VP-------- - ----VVKKRV  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati EL-------- - ----TIKDEE  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin QT-------- - ----QQNKYF  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - MTLPSAARVY  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos QYKHHLTAYE K LEIVSYPEIY Site 1302
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 DL-------- - ----DSDSSI  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg KT-------- - ----CSRDGS  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa TQ-------- - ----QQLQQL  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep MG-------- - ----EPEPEQ  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ---MSYVRQL  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri QP-------- - ----PLGQKF  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VS-------- - ----YIAKHY  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ---------- - ----MSIYKP  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un RK-------- - ----RRTRSY  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. VK-------- - ----IVPDED  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ------MANY  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase KR-------- - ----KRNRHC  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U NA-------- - ----SGATAA  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen VK-------- - ----LGRDSG  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----MATIPG  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi KN-------- - ----DFPPAC  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen VS-------- - ----RDKDGS  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - --------ML  
Aspergillus.fumigatus.IME2 ---------- - -------MTI  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S QLVGDMALVS H THPAAVGSTT Site 1298
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma AS-------- - ----GATVAT  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - -MAAAAAQGG  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ME-------- - ----DLNKRL  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. EP-------- - ----DLECEQ  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 IE-------- - ----DIQELE  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ------MKKY  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d QK-------- - ----LQLENP  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara YRSCKSSRRK H RRRRRRSRSF Site 1305
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH GT-------- - ----KIPVDP  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR SL-------- - ----KSGKQV  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. PA-------- - ----EPELEP  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci RAPYRTRKHA H HCHKRRTRSC Site 1304
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos RR-------- - ----HQQGQG  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act GP-------- - ----VKAEPA  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----ESDSEY  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U RT-------- - ----VVGAAA  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. VP-------- - ----SRARVY  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. RG-------- - ----LEAASA  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos RR-------- - ----HQQGQG  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen VS-------- - ----RDKDGS  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s SK-------- - ----NSGLTN  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD QI-------- - ----RKKSEE  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 SP-------- - ----EKNKII  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci KR-------- - ----KRNRPC  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --------MA  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. RG-------- - ----LQAARA  
Cryptococcus.neoformans.IME2 SI-------- - ----IQGVNG  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote IP-------- - ----EQEEEI  
Candida.lusitaniae.IME2 FL-------- - ----FLILFL  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom RT-------- - ----VVGAAA  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - --------MD  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca VP-------- - ----SRSRVY  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GR-------- - ----VKAEPV  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 SS-------- - ----RSSVCK  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec RR-------- - ----GRRRSP  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. IN-------- - ----FKSSSA  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly AR-------- - ----EEVYEA  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----MTSKTK  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei AS-------- - ----GATVAT  
Acyrthosiphon.pisum.CDK1 ---------- - ------MQSA  
Candida.tropicalis.CDK1 ---------- - ---MMSKHNS  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SF-------- - ----ADPHVS  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR VP-------- - ----SRARVY  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de TE-------- - ----DINKRL  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 AM-------- - ----SKARVY  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ME-------- - ----DLNKRL  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki AS-------- - ----IPQPAL  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - ------MGGA  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA VS-------- - ----RDKDSS  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SV-------- - ----EDEKSA  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei VP-------- - ----SRARVY  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U NA-------- - ----ANQVTV  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SRFDRDSGDS E EGEEEVGEGT Site 698
Candida.dubliniensis.IME2 ---------- - ----MSRHQS  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ----------  
Aspergillus.niger.IME2 ---------- - -------MTV  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. IN-------- - ----FKTSST  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein VP-------- - ----SRARVY  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty TF-------- - ----SIHNAV  
Schizosaccharomyces.japonicus.IME2 ---------- - -----MPFRG  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. GT-------- - ----GGGILM  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ----MSSQRP  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE RG-------- - ----EMVRLQ  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. SL-------- - ----KSGKQV  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ VY-------- - ----SVARVY  
Kluyveromyces.waltii.IME2 HS-------- - ----LKASTN  
Debaryomyces.hansenii.SKY1 ---------- - --------NE  
Saccharomyces.cerevisiae.IME2 ---------- - ----MVEKRS  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein AG-------- - ----SRARVY  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST EK-------- - ----VEKMIN  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ----------  
Candida.albicans.IME2 ---------- - ----MSRHHS  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k EN-------- - ----ENKEIL  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 TL-------- - ----TTADSF  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina GP-------- - ----VKAEPA  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VS-------- - ----SIAKHY  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - -----FCCFF  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SS-------- - ----QSSRSS  
Neurospora.crassa.IME2 ---------- - -----MTVVH  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th LL-------- - ----TQSQSI  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar SA-------- - ----ESELEP  
Ashbya.gossypii.IME2 RE-------- - ----QAEAMG  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PV-------- - ----VKNDFP  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos II-------- - ----NYPEIY  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LS-------- - ----NNIVSK  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom NM-------- - ----GNPVTV  
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch RR-------- - ----RKTRSY  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- - -------MPP  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil VQ-------- - ----GQQQAQ  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ------MDDI  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly AA-------- - ----FNTLRM  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk GT-------- - ----KIPVDP  
Species Residue at Site 579
in 'muscle'
msaprobs

The residue for every species at site 579 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro LL-------- - ----DTNAPP  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AP-------- - ----GQAPGP  
Scheffersomyces.stipitis.SKY1 ---------- - ---------E  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 10:29, December 9th 2019
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