cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 555 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 555 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 555 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 555 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -SSNNNNNNN N NNNNNNENNR Site 1299
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -----MEGGG A PPADTVMSDA Site 693
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 NYVGLSLLTN A LEQVIVLFMF Site 679
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 SQVQSPLTAT N SGLAVNNNTM Site 1288
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ---MNIDQHH Q LQQQHQQQML Site 657
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---TGIRFDR C LDTDSLAKIS Site 690
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 EQAVPTISAS R QGISKEEELE Site 642
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---RHRRRSR E RGPYRTRKHA Site 1293
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---MHSSKSS G RSGRSSYKSK Site 1297
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---GDAYYDT D YRHSYEYQRE Site 1283
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---LTAAEAL K LFKNQLSPYE Site 1291
Homo.sapiens.HIPK1..Homeodomain.interacting.protei -----DSNGS V QIIEEHPPLM Site 1296
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - --------MP  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --SMEDVSKR L SLPMDIRLPQ Site 662
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. GRPAVVPRSS A KKHAPVKRHH Site 687
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET LYNCSQPILD V KIAFCQGFGQ Site 1304
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U LYNCSQPILD V KIAFCQGFGQ Site 1304
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---AAAAAAA M LNPGQQQPYF Site 1298
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---DKAQRKS E TQHRGSAPHS Site 1299
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d TPPPQTPPLP P LPPIPALPQQ Site 577
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ----GPGPDG I GPISSLKTAH Site 1300
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---SGCTTID P DFLVEISDSN Site 690
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -----AAAAA M LNPGQAQSYF Site 1301
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --DNHSSAMQ I VDELSILPAM Site 1296
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O EEMSEDEERE N ENHLLVVPES Site 678
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---GEAYYDT D FRQSYEYHRE Site 1284
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O EEMSEDEERE N ENHLLVVPES Site 678
Naegleria.gruberi.LF4 ---------- - ----------  
Saccharomyces.bayanus.IME2 ---------- - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - --------MP  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th -NNNNNNNNN N NNNNNNNNNN Site 1276
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---IKTYKHI N EVYYAKKKRR Site 1301
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ATPMTPEQAM K QYMQKLTAFE Site 1291
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific KHTSPEDRKA P VEPVSSSSSH Site 1252
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos KVPLTVAEAL K FFKNQLSPYE Site 1291
Aspergillus.nidulans.IME2 ---------- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---MEEPMAF S SLRGSDRCPA Site 1308
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -ALHHHLQNL V QQQQQQQAHH Site 1274
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. LYNCSEPTLD V KIAFCQGFGN Site 1304
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --MTSVGVAP T SGLREASGHG Site 1287
Penicillium.marneffei.IME2 ---------- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ----------  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ----IEDTED D MFADSPSPSV Site 1300
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr RQAIVQKYKY L AEDSNISVPS Site 1220
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PQTPPLPPLP P LPAIPLQPPL Site 580
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -----MNTHN  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin LYYCSEPTLD V KIAFCQGFDK Site 1304
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase RQRDHESRYQ N HSSKSSGRSG Site 1290
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -------MEA S LGIQMDEPMA Site 1298
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ----GSGGGG S GGPGAGTSFP Site 1310
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ---------M  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---DYEKSHH H HYSKSSGRSR Site 1291
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---SDEVQSP V RVRMRNHPPR Site 647
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ---------M  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---IKTYKHI N EVYYAKKKRR Site 1301
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ----MSSKDQ I LEKDKKETDD Site 1303
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 ---------- - -----MMEKV  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati MSASVGNAAQ Q PSVSGNDLQQ Site 1283
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------M G IRLQSSDSMN Site 26
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos SAVKCNLSSR P SKVLPLTPEQ Site 1278
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---PDSGVES H VSIQSDSGPQ Site 1298
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SGRPRTSSFA E GNKQSPSLVL Site 1310
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa --QQQQNQQN Q QQQQNQQQQS Site 689
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -MAFQGPGRS L PGQLCAGVFG Site 1295
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha LYYCGEPTLD V KIAFCQGFGK Site 1304
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ---------- - ----------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un E--YKHSRED S YRSCKSARRK Site 1294
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ----LPSDDL K QGSLHSKNSH Site 694
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase HRDIESGYRI H CSKSSVRSRR Site 1293
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ------ENNS S VQIVDEHPPV Site 1296
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ----GSGGGG S GGPGAGTSFP Site 1310
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi KSICKTPSSN T LDDYMSCFRT Site 1285
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RPRTTSFAES C KPVQQPSAFG Site 1310
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S FALHQHLQNL V QQQQQQQALH Site 1274
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -----ENTSS V QIIEEHPPMI Site 1295
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---SDEVQSP T GVCLRNRIHR Site 641
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 --MFQNKARN S DTEMRSGNQM Site 694
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --SMEDLNKR L SLPMDIRLPQ Site 662
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara GEPYYDPEYR H SYEYRRSRDR Site 1281
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - -----MNKQL  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ------GEDC Y GSSRSRHRRR Site 1280
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---LSVDLIK T YKHINEVYYA Site 1296
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ------MAEP L KEDDGEDGSG Site 1302
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U -----DSNGS V QIIDERPPLM Site 1296
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ---------M  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ----TEPAVF E LTEASSSTAS Site 692
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---LSVDLIK T YKHINEVYYA Site 1296
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RPRTTSFAES C KPVQQPSAFG Site 1310
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - ---------M  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD RKSVNKDRKR N ISHEDSQETR Site 684
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ---NYTAYFF P ELMKLPHNSS Site 693
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci HRDVESTYRI H CSKSSVRSRR Site 1293
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --TEAAFKLT D LKEASCSMTS Site 692
Cryptococcus.neoformans.IME2 ---NSVPSSS T IPEYRDGQAS Site 1296
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ------APHS  
Candida.lusitaniae.IME2 -MRLSNAATA V CGRIKTTVAS Site 677
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom -----ESNGS V QIIEEHPPLM Site 1296
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ---------M  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ------MAEP L KEEDGEDGSG Site 1302
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - ----MLDINE  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---DKEWHHY S KSSGRSGKSG Site 1289
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -STFDPFEKP A NQVKRVHSEN Site 676
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---MADKAAQ D MQAMKLRDRS Site 1302
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -----ENTSS V QIIEEHPPMI Site 1295
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ---------- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -----MSDYR M NRPKEQGTRG Site 1293
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ---------M  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---SDEVQSP V RVRMRNHPPR Site 647
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---SGCTTID P DFLVEISDSN Site 690
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---SDEVQSP T GVCLRNRIHR Site 641
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---LHMKPNP H IPHHQLPGTV Site 1304
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SGRPRTTSFA D ANRGSTSSYG Site 1310
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - ------MKRS  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ---------M  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --ENQNGTMQ I VDELSILPAM Site 1296
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d EVSDEEMSED E DRENENHILV Site 674
Candida.dubliniensis.IME2 ---------- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ----------  
Aspergillus.niger.IME2 ---------- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -STFDPFEKP A NQVKRVHSEN Site 676
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ---------M  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---DSSGKPK T GKEASSSDAN Site 1252
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. RDDDAVSLDS C QSVYSPVRHH Site 1304
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ---MSENLYG  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -----MNKQL  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- M PLPPSTLNQK Site 19
Kluyveromyces.waltii.IME2 ---------- - ------MGYL  
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ---------- - ----------  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - --------MP  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST NISDSKTDGK V ANKHENISSK Site 678
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ----------  
Candida.albicans.IME2 ---------- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --------MS N IQENENKETC Site 702
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 ---------- - ---------M  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ------MAEP L KEEDGEDGSA Site 1302
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. LYYCSEPTLD V KIAFCQGFDK Site 1304
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PLSVGELYKS P KQRQRSRSVS Site 643
Neurospora.crassa.IME2 ---------- - ----------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th SSSSSSSKSN I ASSSSSSSNN Site 1211
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ---MADGDRA  
Ashbya.gossypii.IME2 ---------- - ----MKYYSK  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi LDPKSACETP S SSSLDDYMKC Site 1282
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos VVPLTPEQAL K QYKHHLTAYE Site 1291
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ---MNIQSNN  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --ENHSGAMQ I VDELSILPAM Site 1296
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -----EKERE R SYQRKGSRRK Site 1293
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---MYNGKDR A QNSYQPMYQR Site 672
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - -------MAS  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ----------  
Species Residue at Site 555
in 'muscle'
msaprobs

The residue for every species at site 555 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro IHNAIPITSS D NHYQQDAHQN Site 1280
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---AAAAAAA M LNPGQQQPYF Site 1298
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:55, November 16th 2019
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