cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 554 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 554 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 554 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 554 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - ----------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --SSNNNNNN N NNNNNNNENN Site 1298
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------MEGG G APPADTVMSD Site 692
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 KNYVGLSLLT N ALEQVIVLFM Site 678
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 ---------- - ----------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 MSQVQSPLTA T NSGLAVNNNT Site 1287
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 ---------- - ----------  
Candida.albicans.MAPK3..Extracellular.signal.regul ----MNIDQH H QLQQQHQQQM Site 656
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ----TGIRFD R CLDTDSLAKI Site 689
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 REQAVPTISA S RQGISKEEEL Site 641
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ----RHRRRS R ERGPYRTRKH Site 1292
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ----MHSSKS S GRSGRSSYKS Site 1296
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ----GDAYYD T DYRHSYEYQR Site 1282
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ----LTAAEA L KLFKNQLSPY Site 1290
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ------DSNG S VQIIEEHPPL Site 1295
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ---------M  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - ----------  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - ----------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---SMEDVSK R LSLPMDIRLP Site 661
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LGRPAVVPRS S AKKHAPVKRH Site 686
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET FLYNCSQPIL D VKIAFCQGFG Site 1303
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - ----------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U FLYNCSQPIL D VKIAFCQGFG Site 1303
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ----AAAAAA A MLNPGQQQPY Site 1297
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ----DKAQRK S ETQHRGSAPH Site 1298
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - ----------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d TTPPPQTPPL P PLPPIPALPQ Site 576
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -----GPGPD G IGPISSLKTA Site 1299
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ----SGCTTI D PDFLVEISDS Site 689
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ------AAAA A MLNPGQAQSY Site 1300
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---DNHSSAM Q IVDELSILPA Site 1295
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O EEEMSEDEER E NENHLLVVPE Site 677
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - ----------  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ----GEAYYD T DFRQSYEYHR Site 1283
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O EEEMSEDEER E NENHLLVVPE Site 677
Naegleria.gruberi.LF4 ---------- - ----------  
Saccharomyces.bayanus.IME2 ---------- - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ---------M  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th --NNNNNNNN N NNNNNNNNNN Site 1275
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ----IKTYKH I NEVYYAKKKR Site 1300
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos KATPMTPEQA M KQYMQKLTAF Site 1290
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - ----------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific TKHTSPEDRK A PVEPVSSSSS Site 1251
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos HKVPLTVAEA L KFFKNQLSPY Site 1290
Aspergillus.nidulans.IME2 ---------- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ----MEEPMA F SSLRGSDRCP Site 1307
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --ALHHHLQN L VQQQQQQQAH Site 1273
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. FLYNCSEPTL D VKIAFCQGFG Site 1303
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---MTSVGVA P TSGLREASGH Site 1286
Penicillium.marneffei.IME2 ---------- - ----------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - ----------  
Drosophila.melanogaster.MAK ---------- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -----IEDTE D DMFADSPSPS Site 1299
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr QRQAIVQKYK Y LAEDSNISVP Site 1219
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PPQTPPLPPL P PLPAIPLQPP Site 579
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ------MNTH  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin FLYYCSEPTL D VKIAFCQGFD Site 1303
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase HRQRDHESRY Q NHSSKSSGRS Site 1289
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --------ME A SLGIQMDEPM Site 702
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -----GSGGG G SGGPGAGTSF Site 1309
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ----DYEKSH H HHYSKSSGRS Site 1290
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ----SDEVQS P VRVRMRNHPP Site 646
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ----IKTYKH I NEVYYAKKKR Site 1300
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -----MSSKD Q ILEKDKKETD Site 1302
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ----------  
Debaryomyces.hansenii.IME2 ---------- - ------MMEK  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -MSASVGNAA Q QPSVSGNDLQ Site 1282
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- M GIRLQSSDSM Site 19
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos LSAVKCNLSS R PSKVLPLTPE Site 1277
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ----PDSGVE S HVSIQSDSGP Site 1297
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg MSGRPRTSSF A EGNKQSPSLV Site 1309
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - ----------  
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---QQQQNQQ N QQQQQNQQQQ Site 688
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --MAFQGPGR S LPGQLCAGVF Site 1294
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha LLYYCGEPTL D VKIAFCQGFG Site 1303
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 ---------- - ----------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un YE--YKHSRE D SYRSCKSARR Site 1293
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - ----------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -----LPSDD L KQGSLHSKNS Site 693
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - ----------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase YHRDIESGYR I HCSKSSVRSR Site 1292
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -------ENN S SVQIVDEHPP Site 1295
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -----GSGGG G SGGPGAGTSF Site 1309
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi PKSICKTPSS N TLDDYMSCFR Site 1284
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen GRPRTTSFAE S CKPVQQPSAF Site 1309
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------- - ----------  
Aspergillus.fumigatus.IME2 ---------- - ----------  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S HFALHQHLQN L VQQQQQQQAL Site 1273
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ------ENTS S VQIIEEHPPM Site 1294
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ----SDEVQS P TGVCLRNRIH Site 640
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 ---MFQNKAR N SDTEMRSGNQ Site 693
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - ----------  
Schizosaccharomyces.pombe.IME2 ---------- - ----------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---SMEDLNK R LSLPMDIRLP Site 661
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -GEPYYDPEY R HSYEYRRSRD Site 1280
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - ----------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ------MNKQ  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -------GED C YGSSRSRHRR Site 1279
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ----LSVDLI K TYKHINEVYY Site 1295
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act -------MAE P LKEDDGEDGS Site 1301
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ----------  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ----------  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ------DSNG S VQIIDERPPL Site 1295
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -----TEPAV F ELTEASSSTA Site 691
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ----------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ----LSVDLI K TYKHINEVYY Site 1295
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen GRPRTTSFAE S CKPVQQPSAF Site 1309
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - ----------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -RKSVNKDRK R NISHEDSQET Site 683
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ----NYTAYF F PELMKLPHNS Site 692
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci YHRDVESTYR I HCSKSSVRSR Site 1292
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---TEAAFKL T DLKEASCSMT Site 691
Cryptococcus.neoformans.IME2 ----NSVPSS S TIPEYRDGQA Site 1295
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - -------APH  
Candida.lusitaniae.IME2 --MRLSNAAT A VCGRIKTTVA Site 676
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ------ESNG S VQIIEEHPPL Site 1295
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - ----------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - ----------  
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - ----------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a -------MAE P LKEEDGEDGS Site 1301
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - ----------  
Saccharomyces.castelli.IME2 ---------- - -----MLDIN  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ----DKEWHH Y SKSSGRSGKS Site 1288
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --STFDPFEK P ANQVKRVHSE Site 675
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ----MADKAA Q DMQAMKLRDR Site 1301
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ------ENTS S VQIIEEHPPM Site 1294
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ---------- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - ----------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ------MSDY R MNRPKEQGTR Site 1292
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ----SDEVQS P VRVRMRNHPP Site 646
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ----SGCTTI D PDFLVEISDS Site 689
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ----SDEVQS P TGVCLRNRIH Site 640
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki ----LHMKPN P HIPHHQLPGT Site 1303
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA GSGRPRTTSF A DANRGSTSSY Site 1309
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - -------MKR  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---ENQNGTM Q IVDELSILPA Site 1295
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d EEVSDEEMSE D EDRENENHIL Site 673
Candida.dubliniensis.IME2 ---------- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - ----------  
Aspergillus.niger.IME2 ---------- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - ----------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --STFDPFEK P ANQVKRVHSE Site 675
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ----DSSGKP K TGKEASSSDA Site 1251
Schizosaccharomyces.japonicus.IME2 ---------- - ----------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. GRDDDAVSLD S CQSVYSPVRH Site 1303
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----MSENLY  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ------MNKQ  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - MPLPPSTLNQ  
Kluyveromyces.waltii.IME2 ---------- - -------MGY  
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ---------- - ----------  
Schizosaccharomyces.japonicus.b.IME2 ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ---------M  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -NISDSKTDG K VANKHENISS Site 677
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - ----------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - ----------  
Candida.albicans.IME2 ---------- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------M S NIQENENKET Site 26
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 ---------- - ----------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina -------MAE P LKEEDGEDGS Site 1301
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. FLYYCSEPTL D VKIAFCQGFD Site 1303
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ----------  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SPLSVGELYK S PKQRQRSRSV Site 642
Neurospora.crassa.IME2 ---------- - ----------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th SSSSSSSSKS N IASSSSSSSN Site 1210
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----MADGDR  
Ashbya.gossypii.IME2 ---------- - -----MKYYS  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi WLDPKSACET P SSSSLDDYMK Site 1281
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos KVVPLTPEQA L KQYKHHLTAY Site 1290
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----MNIQSN  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ---------- - ----------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ---ENHSGAM Q IVDELSILPA Site 1295
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ------EKER E RSYQRKGSRR Site 1292
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - ----------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------- - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ---------- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ----MYNGKD R AQNSYQPMYQ Site 671
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - --------MA  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - ----------  
Species Residue at Site 554
in 'muscle'
msaprobs

The residue for every species at site 554 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro SIHNAIPITS S DNHYQQDAHQ Site 1279
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ----AAAAAA A MLNPGQQQPY Site 1297
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:50, November 16th 2019
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