cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2529 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2529 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2529 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2529 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 TSQTEGPNQL - R---------  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ------PLRL - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ALAFNPEYQQ - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -MLNGNSRTL - L---------  
Candida.guilliermondii.IME2 GSCVSLAQLM - G---------  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RQASSVEPSE - Q---------  
Chlamydomonas.reinhardtii.LF4 TRRSTLNTYY - E---------  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g PIVVKQADAD - S---------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 KEKQNGKPLI - AD--------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 LDPTSYEAYQ - Q---------  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho RSNPHAAYPN - ----------  
Schizosaccharomyces.octosporus.b.IME2 SKTDQSILQV - N---------  
Candida.albicans.MAPK3..Extracellular.signal.regul LLYEEIMKPL - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. RAAESSRMRT - Q---------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ISLFSNSRNR - R---------  
Suberites.domuncula.JNK..Stress.activated.protein. TRIYEEVKTY - NS--------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase RSFHTSRNPS - R---------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase KLWDSSRDIS - R---------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos DCLQHGADTV - Q---------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SSSGLKPRSN - V---------  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar TRKSNYHFPN - I---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. AVLSSGLTAA - R---------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ERQPDNAP-- - ----------  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca GSYSPGPSNR - T---------  
Drosophila.melanogaster.CDK1 --GFQSGLVR - N---------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 MSNDQQMKNR - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. PQQTTTTTSS - S---------  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH DDQMNNLHIK - G---------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d PGRGKNRRQS I F--------- Site 4922
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. TTVLIGTQHY - SHI-------  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ETSAGPLGCC - R---------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 TSHNKIVPST - S---------  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ETSAGPLGCC - R---------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. PIARKDSRRR - SGMKL-----  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo EMPPSPLVWE - ----------  
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar PVPGNCNYRV - D---------  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ETSAGTLGCC - R---------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d QPEAEPPGHL P H--------- Site 3923
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. TGANGKVPVL - R---------  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. EAQREYLLKK - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G EAQKAKLVRK - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 KEKQNGKPLI - AD--------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 GSRDNFPGSE - E---------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO GEAGGAQVPV - LKQRAHAQSQ  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C RAAETSRMRS - Q---------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl EMPPSPLVWE - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 TKKLNYRFPN - I---------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei SSSGQSSPSP C K--------- Site 4639
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O GASAAGPGFS - LKF-------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d LQHRTLPRHN - TSSSREELTP  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci KLWDSSRDIS - R---------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O GASAAGPGFS - LKF-------  
Naegleria.gruberi.LF4 LNTSNQSNAS - G---------  
Saccharomyces.bayanus.IME2 IPEQDEFHKK - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. TVLSSGLTAA - R---------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a PAVAESKETA - L---------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki NVEQTQQAQQ - V---------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th EEDNSKVHIN - S---------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos PPSPTSPPPP - E---------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos QQRTVLPKLV - S---------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d PHSDDGTAPK - E---------  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a PSGVKTQVRA - M---------  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific CVKSSSQTLW - K---------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos PKSTNILPPI - V---------  
Aspergillus.nidulans.IME2 RSMGDSPASM - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se SELPPSPQAW - ----------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SRYLPGVNPK - N---------  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------HLRL - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. EASAGPLGCC - R---------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. EHARKQCPFL G L--------- Site 4922
Penicillium.marneffei.IME2 TESPTPSVGG - P---------  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen WKSKIYIQNR - N---------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DNKPHHYSEP - K---------  
Drosophila.melanogaster.MAK GSKLKTSAKR - Q---------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de QPEAEPPGHL P H--------- Site 3925
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep PINKKKREFD - D---------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d AAEGQSKRCR - P---------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin EASAGPLGCC - R---------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a TGPLEGCR-- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -----LKKSI - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 KEKQNGKPLI - AD--------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p LRSESKRFKG - N---------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TDATPTLTNS - S---------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. KDQPSAQMQQ - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki MPVPAAAGAQ - Q---------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a DNKPHHYSEP - K---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d RPAFRVVDTE - F---------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. MPVPAAAGAQ - Q---------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein GDNLHPRKKQ - K---------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. DEFEGTCPLP - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos PPSPTSPPPP - E---------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE SQSSDAKIDG - A---------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ASHTDLLAKV S L--------- Site 4922
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ASPSTTSSSS - S---------  
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot EQGTLKKKLV - F---------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str THDVYGVGQR - R---------  
Debaryomyces.hansenii.IME2 SNITPRGINN - T---------  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati RKLQPAVKTT - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SNGPIRKKKR - ----------  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE RRTNRAASPN - DHIF------  
Caenorhabditis.briggsae.CDK1 AGNYRGELQL - E---------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -----NPNNQ - Q---------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PELIRPFIPE - G---------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos PLCSVLPKLI - S---------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. SSQNSSEVNA - S---------  
Monosiga.brevicollis.CDK1 THVPLVPRIA - G---------  
Saccharomyces.cerevisiae.SKY1 EEVRDHKRH- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP LLYEEIIKPL - Q---------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U SGPYHSIKPS - A---------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg QPQSQGTAAA - A---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas TADQEGRVKQ - N---------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. EAPPLTLSLV - K---------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d FVKPNQPPPA - G---------  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NNNMDSYKYS - K---------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d RHLYNDPVPR - R---------  
Ajellomyces.capsulatus.CDK1 YSGRERLQPY - P---------  
Dictystelium.discoideum.MAPK3..Extracellular.signa QQIHQQVNQQ - SIKN------  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep PSQNTSELNT - A---------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep GTESQSRRGR - P---------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac EAAAGPLGCC - R---------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. DSRRRSGMKL - Q---------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SSKVSKKEER - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha EASAGPLGCC - R---------  
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 FPNIENSYEN - Y---------  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen PPVFDVDEME - S---------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un DTGRDISR-- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar PHTEDGASTK - E---------  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. DIYRLTGKLI - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D VRERIHHLEL - E---------  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U YRHSRAPGHS - F---------  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d TKRFNYHFPN - I---------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen DATTATLASS - S---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 AGNYRGELEL - F---------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro VQPAARKKAR - I---------  
Salmo.salar.CDK1 ------HLRL - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d IAKKLSF--- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PELIRPFILE - G---------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SKTFEKKRGK - K---------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen NAASASASNS - T---------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable NAYRGLASLV - ----------  
Aspergillus.fumigatus.IME2 QGSIRAMTDS - PVSTSGTPGP  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan RSNPHAAYQN - P---------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha GNKKTGNK-- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha PIAQKDSKKR - SGMSL-----  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S SELPPSPQAW - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma YSDSSSNTSP - Y---------  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ARFQPGVLEA - P---------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d HGKNRRQSML - F---------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. TSEGQSKRCK - P---------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de LRKFNYHLPN - I---------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S AHNTNNRTR- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. PLLPFASPPL - PAPL------  
Candida.glabrata.IME2 KEPFSTVPER - C---------  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. SRYLPGVNPK - K---------  
Schizosaccharomyces.pombe.IME2 LPSTEFLVAI - N---------  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P MLYEEIMKPL - ----------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom KARKAPAGSK - ----------  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. TDKTKSNMKG - F---------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d PGRGKSRRQS I F--------- Site 4922
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d QLKFDHLPNI - ----------  
Branchiostoma.floridae.CDK1 VRKIEVPNLK - G---------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara KMWDSSRDIS - R---------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH PIPIHRARID - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SMPVTLSMPE - I---------  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ATGGDMAGPS - A---------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. TSYQRRDTPT - LRSAA-----  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci RSFHSSRNPS - R---------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos TNSSSTQDSM - E---------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------HLRL - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ASGLLAPQPL - V---------  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. PPPLDQEEME - S---------  
Lachancea.thermotolerans.SKY1 QEVTGHPRH- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LSAQHQSADV - ----------  
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. PPRQLGARVP - KETAL-----  
Xenopus.tropicalis.IME2 -------HLI - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U YKPTNSGMKL - R---------  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. MPVPAAAGAQ - Q---------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara VQQRHCR--- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. RHHLVGVNKC - W---------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD KPDTTAPTLS - T---------  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos TNSSSTQDSM - E---------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen NAASASASNS - T---------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s GKALESPPGF - L---------  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD QRKTSTITLS - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 QLNDEGYKYL - K---------  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ------LLKR - K---------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ETARFQPGYR - S---------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. GHHPAQFSKC - W---------  
Cryptococcus.neoformans.IME2 STNLASEAPT - PNQDTRSIYA  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei KARKPPAGSK - ----------  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 MVSKSYFQKY - T---------  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom NSSSLKARSN - ----------  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQQAQAGG - M---------  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep SLIQKHAMSC - S---------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. YKFDHHLPNI - ----------  
Gallus.gallus.CDK2 ------HLRL - ----------  
Emericella.nidulans.CDK1 SGRARRNGFH - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SGTNGRVPVL - R---------  
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 NIGIDKHQNM - Q---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca TQVPTAAGAQ - P---------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a QPVCPPPGPV - P---------  
Mus.musculus.ICK..Serine.threonine.protein.kinase. QRRDTPTLQS - S---------  
Saccharomyces.castelli.IME2 LENLDNGDNK - E---------  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep QGILPKKLIF - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. SYGKSLSNSK - H---------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly PEWYRGEGAG A A--------- Site 4922
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS LLDKDVLLIS - E---------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli QGTLKKKLVF - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho TNQTEFERVF - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei YSDSSSNTSP - Y---------  
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 IGIDQGEENS - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin HQQQQQQQQQ - Q---------  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G HKPGHNSSEL - NH--------  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR PNALQGPIST - TE--------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de RPAFRVVDTE - F---------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 RAAETSRMRS - Q---------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d HGKNRRQSML - F---------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA PIARKDSKKR - SGMSL-----  
Candida.albicans.SSN3..Serine.threonine.protein.ki NVQIQQVHQM - Q---------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GGGAADLGVQ - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ASSATGGSSS - K---------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara DSKRRNTLTM - S---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de PEQDRSQRLR - N---------  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei TPVAAAAGAT - Q---------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U QSSPSPCKRR N S--------- Site 4643
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d GASAAGPGFS - LKF-------  
Candida.dubliniensis.IME2 QPERNSSGNE - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DASTGPLEGC - R---------  
Aspergillus.niger.IME2 ESPVSTSGTG G P--------- Site 4783
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge PPPLDSEEME - S---------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d VRLTERAKKR - R---------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. SYGKSLSNSK - H---------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein MPVPAATGAQ - Q---------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QHLSHQPSQS V Q--------- Site 3915
Schizosaccharomyces.japonicus.IME2 PRTPSSKRFT - S---------  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. TDYARTHDIY - S---------  
Gallus.gallus.CDK1 STLPANLIKK - F---------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P PMPKQEMMAK L D--------- Site 4922
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE PRVLRQLRFN - NL--------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. TTSGDVAGPS - A---------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. PPRQLGARVS - KETPL-----  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 LQNAEDGNAL - E---------  
Debaryomyces.hansenii.SKY1 GEDIPGWSKE - V---------  
Saccharomyces.cerevisiae.IME2 IPEKDEFQRK - Q---------  
Schizosaccharomyces.japonicus.b.IME2 PMKLQTKDTQ - K---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un GVDEGSAG-- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein AVLSSGLTTA - R---------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a IQLSSQHEPT - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep SNQSTSELNT - A---------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST KHFVSAPSSS - L---------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk PLVADSKETS - V---------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de LSHPNSRLTE - R---------  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act GQPASLAQVQ - Q---------  
Candida.albicans.IME2 QPERNSSGNE - S---------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d THICTATDEV - K---------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k PTWPSSHKKT - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. PPPLDQEEME - S---------  
Kluyveromyces.lactis.IME2 HENYRIQVLD - E---------  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina VPQPACPPPG - P---------  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. EASAGPLGCC - R---------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. PPEPPKPPGS L EIEQ------ Site 4919
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 KEKQNGKPLI - AD--------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. PLEPSQLPGT H EIEQ------ Site 4919
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d RRRQQVLPLK - S---------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U EQRPVLRRDY - R---------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME NKLSSGIITG - N---------  
Neurospora.crassa.IME2 MPPAHRAPQH - S---------  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th VIAPTAPSTP - S---------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar GTETQAKRAK - P---------  
Ashbya.gossypii.IME2 RAASDSTLSG - PEELTKEIS-  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SKTFDKKRER - K---------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos PLCSVLPKLI - S---------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p SVKKKLYPKS - K---------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace PVAADPRGRS - ----------  
Schizosaccharomyces.pombe.b.IME2 PPSNGSNIAI - N---------  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a TARFQPGYRS - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TLSTSSSGQS S P--------- Site 4635
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch KNWDSNRDIS - R---------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ASSGLQSVVH - R---------  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ERTKNGVIRG - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -QQCTAGRSS - R---------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable NAFRGLASLA - ----------  
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ARQYVLQRFR - H---------  
Yarrowia.lipolytica.IME2 AKPLNAIKPE - S---------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil SDEPSRKKNR - R---------  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------PLRL - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K RREDHFTGVV - E---------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly PMNKSEMMAK L D--------- Site 4922
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk PIPIHRARID - ----------  
Species Residue at Site 2529
in 'muscle'
msaprobs

The residue for every species at site 2529 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QRQHMPQAQS - S---------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo EMPPSPLVWE - ----------  
Scheffersomyces.stipitis.SKY1 GEDIPGWSKE - L---------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 18:29, March 28th 2020
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