cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2525 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2525 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2525 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2525 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 MFMETSQTEG P NQL-R----- Site 4750
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- P LRL------- Site 4920
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge IYREALAFNP E YQQ------- Site 4920
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -----MLNGN S RTL-L----- Site 4919
Candida.guilliermondii.IME2 FSFSGSCVSL A QLM-G----- Site 4919
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ASSSRQASSV E PSE-Q----- Site 3282
Chlamydomonas.reinhardtii.LF4 AHASTRRSTL N TYY-E----- Site 4715
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g NNFEPIVVKQ A DAD-S----- Site 4919
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 LDKDKEKQNG K PLI-AD---- Site 4918
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 EASKLDPTSY E AYQ-Q----- Site 3277
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SDYQRSNPHA A YPN------- Site 4889
Schizosaccharomyces.octosporus.b.IME2 SHLMSKTDQS I LQV-N----- Site 4780
Candida.albicans.MAPK3..Extracellular.signal.regul DLKKLLYEEI M KPL------- Site 4920
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --QVRAAESS R MRT-Q----- Site 4919
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 GGKDISLFSN S RNR-R----- Site 4919
Suberites.domuncula.JNK..Stress.activated.protein. DQWKTRIYEE V KTY-NS---- Site 4918
Homo.sapiens.CLK3..Dual.specificity.protein.kinase TPEERSFHTS R NPS-R----- Site 4000
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---NKLWDSS R DIS-R----- Site 4000
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos GDQQDCLQHG A DTV-Q----- Site 3962
Homo.sapiens.HIPK1..Homeodomain.interacting.protei KYKPSSSGLK P RSN-V----- Site 4642
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar YFCKTRKSNY H FPN-I----- Site 4919
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. CADNAVLSSG L TAA-R----- Site 4919
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM LKFKERQPDN A P--------- Site 4922
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca PHTRGSYSPG P SNR-T----- Site 4919
Drosophila.melanogaster.CDK1 ------GFQS G LVR-N----- Site 4001
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 QQNKMSNDQQ M KNR------- Site 3273
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. SDQSPQQTTT T TSS-S----- Site 4891
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH AENVDDQMNN L HIK-G----- Site 4919
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d AFQQPGRGKN R RQSIF----- Site 4918
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. FHWYTTVLIG T QHY-SHI--- Site 4917
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DSSLETSAGP L GCC-R----- Site 4919
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 HDSRTSHNKI V PST-S----- Site 3594
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DSSLETSAGP L GCC-R----- Site 4919
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. VNFSPIARKD S RRR-SGMKL- Site 4915
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AQPSEMPPSP L VWE------- Site 4920
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar SSMVPVPGNC N YRV-D----- Site 3580
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. DSSLETSAGT L GCC-R----- Site 4919
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d QLLSQPEAEP P GHLPH----- Site 3919
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. SVLGTGANGK V PVL-R----- Site 4883
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. EAMTEAQREY L LKK------- Site 4920
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G EVMSEAQKAK L VRK------- Site 4920
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 LDKDKEKQNG K PLI-AD---- Site 4918
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 TAVSGSRDNF P GSE-E----- Site 3297
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO EDEGGEAGGA Q VPV-LKQRAH Site 4514
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --QVRAAETS R MRS-Q----- Site 4919
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AQPSEMPPSP L VWE------- Site 4920
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 YYCDTKKLNY R FPN-I----- Site 4919
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TLSTSSSGQS S PSPCK----- Site 4635
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O TTNQGASAAG P GFS-LKF--- Site 4917
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d LSPQLQHRTL P RHN-TSSSRE Site 4377
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --NTKLWDSS R DIS-R----- Site 4000
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O TTNQGASAAG P GFS-LKF--- Site 4917
Naegleria.gruberi.LF4 SNSNLNTSNQ S NAS-G----- Site 4786
Saccharomyces.bayanus.IME2 FDLEIPEQDE F HKK------- Site 4835
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. CAENTVLSSG L TAA-R----- Site 4919
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a FQPAPAVAES K ETA-L----- Site 4919
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki IQVDNVEQTQ Q AQQ-V----- Site 4919
Dictyostelium.discoideum.DYRK1..Probable.serine.th LNDSEEDNSK V HIN-S----- Site 3934
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos CLGRPPSPTS P PPP-E----- Site 3937
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos NGNIQQRTVL P KLV-S----- Site 4919
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d VYHDPHSDDG T APK-E----- Site 4535
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a PPSAPSGVKT Q VRA-M----- Site 4777
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific DVSECVKSSS Q TLW-K----- Site 4919
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos STSSPKSTNI L PPI-V----- Site 4919
Aspergillus.nidulans.IME2 QGSIRSMGDS P ASM------- Site 4778
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se VAQASELPPS P QAW------- Site 4920
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. YLKQSRYLPG V NPK-N----- Site 4743
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- H LRL------- Site 4920
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DSSLEASAGP L GCC-R----- Site 4919
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. KLVPEHARKQ C PFLGL----- Site 4918
Penicillium.marneffei.IME2 MRSMTESPTP S VGG-P----- Site 4780
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen EIEEWKSKIY I QNR-N----- Site 4919
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a LLWRDNKPHH Y SEP-K----- Site 4787
Drosophila.melanogaster.MAK DLILGSKLKT S AKR-Q----- Site 4740
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de QLLSQPEAEP P GHLPH----- Site 3921
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep PPRLPINKKK R EFD-D----- Site 4919
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d AAPAAAEGQS K RCR-P----- Site 4919
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DSSLEASAGP L GCC-R----- Site 4919
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a LDASTGPLEG C R--------- Site 4922
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------L K KSI------- Site 3396
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 LDKDKEKQNG K PLI-AD---- Site 4918
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p LSTSLRSESK R FKG-N----- Site 4919
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen DWQSTDATPT L TNS-S----- Site 4919
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. NGVVKDQPSA Q MQQ------- Site 4920
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki NPLGMPVPAA A GAQ-Q----- Site 4919
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a LLWRDNKPHH Y SEP-K----- Site 4787
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d PDSGRPAFRV V DTE-F----- Site 4919
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. NPLGMPVPAA A GAQ-Q----- Site 4919
Yarrowia.lipolytica.SSN3..Serine.threonine.protein GSQGGDNLHP R KKQ-K----- Site 4919
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. MSIKDEFEGT C PLP------- Site 4920
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos YLGRPPSPTS P PPP-E----- Site 3937
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE NSASSQSSDA K IDG-A----- Site 4919
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH SHELASHTDL L AKVSL----- Site 4918
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NSHSASPSTT S SSS-S----- Site 4884
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot RDSIEQGTLK K KLV-F----- Site 4919
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str NYYRTHDVYG V GQR-R----- Site 4919
Debaryomyces.hansenii.IME2 IGDDSNITPR G INN-T----- Site 4820
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ADIVRKLQPA V KTT------- Site 4920
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin GSSSSNGPIR K KKR------- Site 4920
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE MRSRRRTNRA A SPN-DHIF-- Site 4916
Caenorhabditis.briggsae.CDK1 SKLPAGNYRG E LQL-E----- Site 4001
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------N P NNQ-Q----- Site 4919
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de SLLNPELIRP F IPE-G----- Site 4919
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos SGSIPLCSVL P KLI-S----- Site 4919
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. SHMSSSQNSS E VNA-S----- Site 4919
Monosiga.brevicollis.CDK1 --PGTHVPLV P RIA-G----- Site 4001
Saccharomyces.cerevisiae.SKY1 PGWFEEVRDH K RH-------- Site 4921
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP DLKELLYEEI I KPL-Q----- Site 4919
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U NGAQSGPYHS I KPS-A----- Site 4919
Drosophila.melanogaster.GSK3..Protein.kinase.shagg EGSAQPQSQG T AAA-A----- Site 4791
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---QTADQEG R VKQ-N----- Site 4919
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. PGAKEAPPLT L SLV-K----- Site 4774
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d YCNPFVKPNQ P PPA-G----- Site 3587
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KTSQNNNMDS Y KYS-K----- Site 4919
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d PKENRHLYND P VPR-R----- Site 4455
Ajellomyces.capsulatus.CDK1 GSSAYSGRER L QPY-P----- Site 4919
Dictystelium.discoideum.MAPK3..Extracellular.signa QQQKQQIHQQ V NQQ-SIKN-- Site 4916
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep SHLPPSQNTS E LNT-A----- Site 4919
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ATSLGTESQS R RGR-P----- Site 4919
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac DSSLEAAAGP L GCC-R----- Site 4919
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. IARKDSRRRS G MKL-Q----- Site 4919
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri TAWHSSKVSK K EER------- Site 4920
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DSSLEASAGP L GCC-R----- Site 4919
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 AGQGFPNIEN S YEN-Y----- Site 4844
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ISFEPPVFDV D EME-S----- Site 4919
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un LKHWDTGRDI S R--------- Site 4922
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar AYHDPHTEDG A STK-E----- Site 4668
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. LSSNDIYRLT G KLI------- Site 4920
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D FGTCVRERIH H LEL-E----- Site 4685
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U AGTAYRHSRA P GHS-F----- Site 4764
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d YHCSTKRFNY H FPN-I----- Site 4919
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen WQPSDATTAT L ASS-S----- Site 4919
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 SKLPAGNYRG E LEL-F----- Site 4001
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro SGNIVQPAAR K KAR-I----- Site 4919
Salmo.salar.CDK1 ---------- H LRL------- Site 4920
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d DQKDIAKKLS F ---------- Site 4923
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d SLLNPELIRP F ILE-G----- Site 4919
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi NSSSSKTFEK K RGK-K----- Site 4919
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen GQTNNAASAS A SNS-T----- Site 4919
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LLVNNAYRGL A SLV------- Site 4814
Aspergillus.fumigatus.IME2 QSMPQGSIRA M TDS-PVSTSG Site 4782
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SDYQRSNPHA A YQN-P----- Site 4889
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha NTVTGNKKTG N K--------- Site 4922
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha LSFSPIAQKD S KKR-SGMSL- Site 4915
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S VAQASELPPS P QAW------- Site 4920
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma HDSPYSDSSS N TSP-Y----- Site 4659
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina FQETARFQPG V LEA-P----- Site 4919
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d PETGHGKNRR Q SML-F----- Site 4919
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. AAPATSEGQS K RCK-P----- Site 4919
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de NYNNLRKFNY H LPN-I----- Site 4919
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S MDYEAHNTNN R TR-------- Site 4921
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. FSLSPLLPFA S PPL-PAPL-- Site 4916
Candida.glabrata.IME2 NNIEKEPFST V PER-C----- Site 4798
Homo.sapiens.MAK..Serine.threonine.protein.kinase. YLKQSRYLPG V NPK-K----- Site 4744
Schizosaccharomyces.pombe.IME2 FDRPLPSTEF L VAI-N----- Site 4759
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P DLKKMLYEEI M KPL------- Site 4920
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom TGRHKARKAP A GSK------- Site 4801
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. TGKQTDKTKS N MKG-F----- Site 4919
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d AFQHPGRGKS R RQSIF----- Site 4918
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d KQVVQLKFDH L PNI------- Site 4920
Branchiostoma.floridae.CDK1 ---DVRKIEV P NLK-G----- Site 4919
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---TKMWDSS R DIS-R----- Site 4000
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH DDFVPIPIHR A RID------- Site 4920
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SGFSSMPVTL S MPE-I----- Site 4890
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR NEVSATGGDM A GPS-A----- Site 4919
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. APTQTSYQRR D TPT-LRSAA- Site 4722
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci TPEERSFHSS R NPS-R----- Site 4000
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos YNSPTNSSST Q DSM-E----- Site 3888
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- H LRL------- Site 4920
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QTTAASGLLA P QPL-V----- Site 4493
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ISFVPPPLDQ E EME-S----- Site 4919
Lachancea.thermotolerans.SKY1 PGWSQEVTGH P RH-------- Site 4921
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GTIQLSAQHQ S ADV------- Site 4744
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. LSFKPPRQLG A RVP-KETAL- Site 4915
Xenopus.tropicalis.IME2 ---------- - HLI-------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U EDSKYKPTNS G MKL-R----- Site 4634
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. TTLGMPVPAA A GAQ-Q----- Site 4919
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara EEQHVQQRHC R ---------- Site 4923
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. SYRKRHHLVG V NKC-W----- Site 4919
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD TNPTKPDTTA P TLS-T----- Site 4919
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos YNSPTNSSST Q DSM-E----- Site 3888
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen GQTNNAASAS A SNS-T----- Site 4919
Drosophila.melanogaster.GSK3H..Putative.glycogen.s PGPSGKALES P PGF-L----- Site 4555
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD KAENQRKTST I TLS------- Site 4920
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 SSEPQLNDEG Y KYL-K----- Site 4808
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- L LKR-K----- Site 3321
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a LIFEETARFQ P GYR-S----- Site 4919
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. SYQKGHHPAQ F SKC-W----- Site 4919
Cryptococcus.neoformans.IME2 IEYSSTNLAS E APT-PNQDTR Site 4741
Homo.sapiens.HIPK4..Homeodomain.interacting.protei AGRHKARKPP A GSK------- Site 4800
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 CDYKMVSKSY F QKY-T----- Site 4871
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom KYKPNSSSLK A RSN------- Site 4642
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQMQQQQQA Q AGG-M----- Site 4852
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep VVDPSLIQKH A MSC-S----- Site 4919
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. KHNKYKFDHH L PNI------- Site 4920
Gallus.gallus.CDK2 ---------- H LRL------- Site 4920
Emericella.nidulans.CDK1 SSYYSGRARR N GFH------- Site 4920
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SVLGSGTNGR V PVL-R----- Site 4884
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 YNEDNIGIDK H QNM-Q----- Site 4919
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca NTMATQVPTA A GAQ-P----- Site 4919
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GPASQPVCPP P GPV-P----- Site 4468
Mus.musculus.ICK..Serine.threonine.protein.kinase. QASSQRRDTP T LQS-S----- Site 4725
Saccharomyces.castelli.IME2 FGNNLENLDN G DNK-E----- Site 4793
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep EALEQGILPK K LIF------- Site 4920
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. GKNNSYGKSL S NSK-H----- Site 4919
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ARLVPEWYRG E GAGAA----- Site 4918
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS SEADLLDKDV L LIS-E----- Site 4919
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli DSIEQGTLKK K LVF------- Site 4920
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho NPATTNQTEF E RVF------- Site 4920
Homo.sapiens.HIPK2..Homeodomain.interacting.protei HDSPYSDSSS N TSP-Y----- Site 4657
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 FDEYIGIDQG E ENS------- Site 4852
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QDFHHQQQQQ Q QQQ-Q----- Site 4898
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SSSLHKPGHN S SEL-NH---- Site 4918
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR NSPTPNALQG P IST-TE---- Site 4918
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de PDSGRPAFRV V DTE-F----- Site 4919
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --QVRAAETS R MRS-Q----- Site 4919
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d PETGHGKNRR Q SML-F----- Site 4919
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA LSFSPIARKD S KKR-SGMSL- Site 4915
Candida.albicans.SSN3..Serine.threonine.protein.ki SQQQNVQIQQ V HQM-Q----- Site 4885
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GGYGGGGAAD L GVQ------- Site 4798
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TSATASSATG G SSS-K----- Site 4919
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara FPRRDSKRRN T LTM-S----- Site 4919
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RYYRPEQDRS Q RLR-N----- Site 4534
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei NTLGTPVAAA A GAT-Q----- Site 4919
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SSSGQSSPSP C KRRNS----- Site 4639
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d TTNQGASAAG P GFS-LKF--- Site 4917
Candida.dubliniensis.IME2 YIAKQPERNS S GNE------- Site 4857
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DSSLDASTGP L EGC-R----- Site 4919
Aspergillus.niger.IME2 RSMGESPVST S GTGGP----- Site 4779
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge TCFVPPPLDS E EME-S----- Site 4919
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d FHPSVRLTER A KKR-R----- Site 3566
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. GKNNSYGKSL S NSK-H----- Site 4919
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein NPLGMPVPAA T GAQ-Q----- Site 4919
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QQQRQHLSHQ P SQSVQ----- Site 3911
Schizosaccharomyces.japonicus.IME2 SIAQPRTPSS K RFT-S----- Site 4796
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. FRELTDYART H DIY-S----- Site 4919
Gallus.gallus.CDK1 DLDKSTLPAN L IKK-F----- Site 4001
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P DNFTPMPKQE M MAKLD----- Site 4918
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE VSVKPRVLRQ L RFN-NL---- Site 4918
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. GEVSTTSGDV A GPS-A----- Site 4919
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. LSFKPPRQLG A RVS-KETPL- Site 4915
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 LSSSLQNAED G NAL-E----- Site 4819
Debaryomyces.hansenii.SKY1 VGGSGEDIPG W SKE-V----- Site 4919
Saccharomyces.cerevisiae.IME2 FDLEIPEKDE F QRK-Q----- Site 4835
Schizosaccharomyces.japonicus.b.IME2 PKRQPMKLQT K DTQ-K----- Site 4761
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un SGQKGVDEGS A G--------- Site 4922
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein SSENAVLSSG L TTA-R----- Site 4919
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a IAGTIQLSSQ H EPT------- Site 4743
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep SHLPSNQSTS E LNT-A----- Site 4919
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST EERLKHFVSA P SSS-L----- Site 4919
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk TSFEPLVADS K ETS-V----- Site 4919
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de LSSNLSHPNS R LTE-R----- Site 3560
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act GVIRGQPASL A QVQ-Q----- Site 4919
Candida.albicans.IME2 YIAKQPERNS S GNE-S----- Site 4857
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d QEHFTHICTA T DEV-K----- Site 4919
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k PLLMPTWPSS H KKT------- Site 4920
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ISFVPPPLDQ E EME-S----- Site 4919
Kluyveromyces.lactis.IME2 IDMDHENYRI Q VLD-E----- Site 3994
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina TSGPVPQPAC P PPG-P----- Site 4461
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DSSLEASAGP L GCC-R----- Site 4919
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. LSFKPPEPPK P PGSLEIEQ-- Site 4915
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 LDKDKEKQNG K PLI-AD---- Site 4918
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. LSFKPLEPSQ L PGTHEIEQ-- Site 4915
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d EGRNRRRQQV L PLK-S----- Site 4919
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U SGSPEQRPVL R RDY-R----- Site 4919
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME VGPGNKLSSG I ITG-N----- Site 4883
Neurospora.crassa.IME2 EVPPMPPAHR A PQH-S----- Site 4766
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---KVIAPTA P STP-S----- Site 4919
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar STSTGTETQA K RAK-P----- Site 4919
Ashbya.gossypii.IME2 VGDGRAASDS T LSG-PEELTK Site 3980
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi DSSSSKTFDK K RER-K----- Site 4919
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos NGSIPLCSVL P KLI-S----- Site 4919
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p DELSSVKKKL Y PKS-K----- Site 4919
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace GANGPVAADP R GRS------- Site 4764
Schizosaccharomyces.pombe.b.IME2 PSYKPPSNGS N IAI-N----- Site 4822
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a IFEETARFQP G YRS------- Site 4920
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom SPDSTLSTSS S GQSSP----- Site 4631
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch AAGSKNWDSN R DIS-R----- Site 4000
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas PGRVASSGLQ S VVH-R----- Site 4919
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac MDLEERTKNG V IRG------- Site 4910
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -----QQCTA G RSS-R----- Site 4919
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable LLVNNAFRGL A SLA------- Site 4799
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ----ARQYVL Q RFR-H----- Site 4919
Yarrowia.lipolytica.IME2 VRVTAKPLNA I KPE-S----- Site 3982
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GNNASDEPSR K KNR-R----- Site 4919
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- P LRL------- Site 4920
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K DRDQRREDHF T GVV-E----- Site 4919
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly DNFTPMNKSE M MAKLD----- Site 4918
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk DDFVPIPIHR A RID------- Site 4920
Species Residue at Site 2525
in 'muscle'
msaprobs

The residue for every species at site 2525 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QQQQQRQHMP Q AQS-S----- Site 3926
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AQPSEMPPSP L VWE------- Site 4920
Scheffersomyces.stipitis.SKY1 VGGSGEDIPG W SKE-L----- Site 4919
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 14:44, December 4th 2020
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