cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2509 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2509 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2509 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2509 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 YMLSTAEYNA T NKSMPMFMET Site 4734
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge FDFEQHALTE E QMKELIYREA Site 4904
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 NPLNPNQLKG A SSEGTFSFSG Site 4903
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RPRTSSRTGS A SRRAVASSSR Site 3266
Chlamydomonas.reinhardtii.LF4 LSLGKANMTG S TVGGAAHAST Site 4699
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g KAILPPHVYE S LDVDINNFEP Site 4903
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - --LEQLDKDK  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NRYQLQPDDS H YDEEREASKL Site 3261
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho VRVVPPTTTS G GLIMTSDYQR Site 4873
Schizosaccharomyces.octosporus.b.IME2 CELVESRLLP V YEQQSSHLMS Site 4764
Candida.albicans.MAPK3..Extracellular.signal.regul EDFFDFDKMK D QLTIEDLKKL Site 4904
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - -------QVR  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 VVSNSPNASH V LNAGIGGKDI Site 4903
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -----DQWKT  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ---GLTPEER  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - --------NK  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos TTEKTKDSPT K HVQHSGDQQD Site 3946
Homo.sapiens.HIPK1..Homeodomain.interacting.protei VSVITIRSDT D EEEDNKYKPS Site 4626
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar PQLSSSNVLP A LDSKKYFCKT Site 4903
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ---QPCADNA  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM DDISRDALKS L IFEETLKFKE Site 4906
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca APMDHATHSK A QGSIDPHTRG Site 4903
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 LQSLTQGQST S NQFYLQQNKM Site 3257
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. EQFRQLLSTP S YNNVDSDQSP Site 3303
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- V TTQNDAENVD Site 3321
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d SLKEIQLQKD P GYRGLAFQQP Site 4902
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. TTVLIGTQQF S LVQNNFHWYT Site 4901
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET NDISSMSTDQ T LASDTDSSLE Site 4903
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 GEKAEKGNRA S NASCLHDSRT Site 3578
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U NDISSMSTDQ T LASDTDSSLE Site 4903
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. EKLTVDEWKQ H IYKEIVNFSP Site 4899
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo INPQSAAFKS F ISSTVAQPSE Site 4904
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ADIVIPPINQ N VSPTMSSMVP Site 3564
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. GDASSMSTDP T LPSDTDSSLE Site 4903
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SSAPQELNPA V TAALLQLLSQ Site 3903
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LSGMTKLSSC S SPALRSVLGT Site 4867
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. GNPLPAHLYQ F TPDEVEAMTE Site 4904
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G NKDLPEDLFR F LPSEIEVMSE Site 4904
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - --LEQLDKDK  
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 PSSSLFAQSA G SSRRVTAVSG Site 3281
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO IHDTPSPTAV I TISDSEDEGG Site 4498
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - -------QVR  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl INPQSAAFKS F ISSTVAQPSE Site 4904
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 PQLTGSSILP A LDNKKYYCDT Site 4903
Homo.sapiens.HIPK3..Homeodomain.interacting.protei STLNIDRMCS L SSPDSTLSTS Site 4619
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O SQLGDDDLKE T GFHLTTTNQG Site 4901
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d LVVGQGVPTR A SSLQLLSPQL Site 4361
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - -------NTK  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O SQLGDDDLKE T GFHLTTTNQG Site 4901
Naegleria.gruberi.LF4 KPVQNQQGIT S YGKNMSNSNL Site 4770
Saccharomyces.bayanus.IME2 IEIINKDEAD N MEQLFFDLEI Site 4819
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ---QPCAENT  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -------RLT F TEILTFQPAP Site 4903
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQQQQQQQI Q SQPEPIQVDN Site 4903
Dictyostelium.discoideum.DYRK1..Probable.serine.th KASMKDKSPH S NISNILNDSE Site 3918
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ASTLPGTGAQ L PPLPRCLGRP Site 3921
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos SSASKLRTNL A QMTDANGNIQ Site 3988
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d REGASSFHTR Q KSEGGVYHDP Site 4519
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a LPPPGRGERP P GATGQPPSAP Site 4761
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific RAASNLAMMC N SGRKLDVSEC Site 4903
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos GKSETVAGSE M SAEQQSTSSP Site 3988
Aspergillus.nidulans.IME2 VSITTPVEAS K RQSMPQGSIR Site 4762
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se CINPQSAAYK N FASSSVAQAS Site 4904
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. LKSDPNLSTA S TAKQYYLKQS Site 4727
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. NDISSMSTDQ T LASDTDSSLE Site 4903
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. NFKSHELKGV P AEILVKLVPE Site 4902
Penicillium.marneffei.IME2 IPNQSPSKRQ S VPQVPMRSMT Site 4764
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen EPEADPYDQS F ESRDLEIEEW Site 4903
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a GRSCDYKVGS P SYLDKLLWRD Site 4771
Drosophila.melanogaster.MAK AAVQDPKMGA L KSDDLDLILG Site 4724
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SSAPQELNPA V TAALLQLLSQ Site 3905
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - KPIPYPPRLP  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ----LMPTFP H HRNKRAAPAA Site 4903
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin NDISSMSTDQ T LASDTDSSLE Site 4903
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SSMSTEQTLA S DTDSSLDAST Site 4906
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - --LEQLDKDK  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ERRISEDDSE V SSKRVLSTSL Site 4903
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TLTPSSQALT E TPTSSDWQST Site 4903
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. KELIYKEVMD W EERSKNGVVK Site 4904
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki PSPLGPLAGS P VIAAANPLGM Site 3989
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a GRSCDYKVGS P SYLDKLLWRD Site 4771
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d KEVQLQKEAN I RSTSMPDSGR Site 4903
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. PSPLGPLAGS P VIAAANPLGM Site 3989
Yarrowia.lipolytica.SSN3..Serine.threonine.protein CEDSDIKTMT Y QGTKRGSQGG Site 4903
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. INYTPILRKD S KRKSGMSIKD Site 4904
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ASSLPGTGAQ L PPQPRYLGRP Site 3921
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --RANGTEQA D GQGASNSASS Site 3989
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -RLPNGNALP P LFDFTSHELA Site 4902
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NQSSSSNSNA N VSSNLNSHSA Site 4868
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot EALKEKENLL I GIKRKRDSIE Site 4903
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str EHTVEEWRAM L FAELQNYYRT Site 4903
Debaryomyces.hansenii.IME2 SQGRDSFDFE N KCIKNIGDDS Site 4804
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati LPPLFNWLPG E LDEVPADIVR Site 4904
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAAAAAVQVN G TNIVSGSSSS Site 4904
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - -----MRSRR  
Caenorhabditis.briggsae.CDK1 ---------- - -DIDTSKLPA  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de GPPHVHDFHV D RPLEESLLNP Site 4903
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos VVGIASKLKA N LMSETSGSIP Site 3988
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - --NLDSHMSS  
Monosiga.brevicollis.CDK1 ---------- - -------PGT  
Saccharomyces.cerevisiae.SKY1 -IRVPDRELY G SGSDIPGWFE Site 3632
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP DDFFDFDRRK E ELTMLDLKEL Site 4903
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -------RFS Q HLELCNGAQS Site 4903
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ASGSTSVSST G SGASVEGSAQ Site 4543
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - --------QT  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. SAPLLQTALL G NGERPPGAKE Site 4758
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d TIPGVQNYRV D EKTKKYCNPF Site 3571
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NQNNQTNQNN Q TNQNNKTSQN Site 4903
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d SEGGVYHDPH S DDGTAPKENR Site 4439
Ajellomyces.capsulatus.CDK1 ---------- - ----AGSSAY  
Dictystelium.discoideum.MAPK3..Extracellular.signa FNLSRIQSSS E LFNLLQQQKQ Site 4900
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - --NLDSHLPP  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -LMPTFPHHR N KRATPATSLG Site 4903
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac NDVSSMSTDP T LASDTDSSLE Site 4903
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. DEWKQHIYKE I SNFSPIARKD Site 4903
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LCINPHSAAF K TFIRSTAWHS Site 4904
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha NDISSMSTDQ T LASDTDSSLE Site 4903
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 QPINLEHTNG T STTNIAGQGF Site 4828
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen RELDIEEWKR Q TYEEMISFEP Site 4903
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - -----LKHWD  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar RDVTAAFHSR R KSEGGAYHDP Site 4553
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. IDSLPLLHFE E SELQGLSSND Site 4904
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KADESLSKDQ Q KDSITFGTCV Site 4669
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U KLLSSVASAS H SSASSAGTAY Site 4748
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d PQLTSSRILP A LDNKKYHCST Site 4903
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen YNPSSQALTE A QTGQDWQPSD Site 4903
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - -NMDTSKLPA  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro SMAGGRLPSS S NFRPASGNIV Site 4903
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d QQNLNLGIKR K RTEGMDQKDI Site 4907
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d GPPHIHDFHV D RPLEESLLNP Site 4903
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi KAAKTLYEHY S GGESHNSSSS Site 4903
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PPANATAASD T NAGDRGQTNN Site 4903
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable VVALLLQSIR L CQDRALLVNN Site 4798
Aspergillus.fumigatus.IME2 GNVPVQITST G DVSKRQSMPQ Site 4766
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan VRVVPPTATS S GLIMTSDYQR Site 4873
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - -----NTVTG  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EKLSIEEWKK H IYKEILSFSP Site 4899
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S CINPQSAAYK N FASSSVAQAS Site 4904
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma STVSKQRKNV I SCVTVHDSPY Site 4643
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina AMELDDLPKE R LKELIFQETA Site 4903
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d KEIQLQKDPG F RNSSYPETGH Site 4903
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ----LMPTFP H HRNKRAAPAT Site 4903
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de PQLASSTVFP A VENRRNYNNL Site 4903
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S REHTVEQWKE L IYEEVMDYEA Site 4905
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --------SN D FSLVPFSLSP Site 4900
Candida.glabrata.IME2 IQNELSKPIT F EEQNANNIEK Site 3992
Homo.sapiens.MAK..Serine.threonine.protein.kinase. LKSDSELSTA P TSKQYYLKQS Site 4728
Schizosaccharomyces.pombe.IME2 FIISSSEDST S PKAKEFDRPL Site 4743
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P EDFFDFDKRK D ELSIDDLKKM Site 4904
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom PDSGPEPILA F YGSRLTGRHK Site 4785
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - --QTPTGKQT  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d SLKEIQLQKD P GYRGLAFQHP Site 4902
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d LPLIPGSHIS P TPDGRKQVVQ Site 4904
Branchiostoma.floridae.CDK1 ---------- - --------DV  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - --------TK  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH QKLIPSHARD A LPVKLDDFVP Site 4904
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD NAANSNHRLE Q LDAHNSGFSS Site 4874
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR RLPSGRALPQ L EMDGPNEVSA Site 4903
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. SVLDLKPSEP V GTGNSAPTQT Site 4706
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ---GLTPEER  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HHHGQQALGN R TRPRVYNSPT Site 3872
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QPACPPPAPA A GPAAPQTTAA Site 4477
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. RDLLIDEWKS L TYDEVISFVP Site 4903
Lachancea.thermotolerans.SKY1 -VALSERKLY Q SGADIPGWSQ Site 3632
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a AERERGQGFD F DSFIAGTIQL Site 4728
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. VDRTLEEWKR V TYKEVLSFKP Site 4899
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SPPVSVITIR S DTDEEEDSKY Site 4618
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. PSPLGPLAGS P VISATTTLGM Site 3989
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - -----EEQHV  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. AVSGVKLKPE M CDLSASYRKR Site 4903
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD LYNDIIKKKK E ERKKQTNPTK Site 4903
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HHHGQQALGN R TRPRVYNSPT Site 3872
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TPTNATAASD A NTGDRGQTNN Site 4903
Drosophila.melanogaster.GSK3H..Putative.glycogen.s KTEDSQKPAT A ALSKSPGPSG Site 4539
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD NYKSRQNQTD R KKPEKKAENQ Site 4904
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 IQDNVHLYSL S RDPEFSSEPQ Site 4792
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a KFDMELDDLP K EKLKELIFEE Site 4903
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. TVSGVRLKPE M CDLLASYQKG Site 4903
Cryptococcus.neoformans.IME2 RNQLIESRSQ L KTKGEIEYSS Site 4725
Homo.sapiens.HIPK4..Homeodomain.interacting.protei PDSGPEPILA F YSSRLAGRHK Site 4784
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 SGLGQEIQLN S SQEVSCDYKM Site 4855
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom VSVITIRSDT D EEEDNKYKPN Site 4626
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQANQQNQQ S QQQQQQQQMQ Site 4836
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep MQPPHEFTVD R PLHESVVDPS Site 4903
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. LPQLASSNMS P APEMKKHNKY Site 4904
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ---HGSSYYS  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. LSGVVRLSSY S SPTLQSVLGS Site 4868
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ---NNYNEDN  
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca PNIANISAGS P VIPAPNTMAT Site 3989
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PVSQSTGPLQ P AGSIPGPASQ Site 4452
Mus.musculus.ICK..Serine.threonine.protein.kinase. DLKPSESVGT G TTVSTQASSQ Site 4709
Saccharomyces.castelli.IME2 THIKIPNELD Q NVSLYFGNNL Site 3987
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep LKEPANPTVA T KRKRAEALEQ Site 4904
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. PNVRLQPEAG E SMRAFGKNNS Site 4903
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly FDFTEDELRA C TPEMRARLVP Site 4902
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -LLDGESTDE D DVVSSSEADL Site 4903
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ALKEKENLLI G IKRKRDSIEQ Site 4904
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho RRKGSQITQQ S TNQSRNPATT Site 4904
Homo.sapiens.HIPK2..Homeodomain.interacting.protei STVSKQRKNV I SCVTVHDSPY Site 4641
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 DEFPIYQDLD D GYENYFDEYI Site 4836
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin AEPNAKRVRL S GAGNQQDFHH Site 4882
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G HSSTSGNHYS G GAGGTSSSLH Site 4902
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - RMVSSNSPTP  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de KEIQLQKEAS L RSSSMPDSGR Site 4903
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - -------QVR  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d KEIQLQKDPG F RNSSYPETGH Site 4903
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EKLSIEEWKK H IYKEILSFSP Site 4899
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N SGHQLSQQQN Site 4869
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ISAGGISLGG V SAARSGGYGG Site 4782
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA QNSSSSTAPH D TPEPSTSATA Site 4903
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ----RLSFKE V RSFVPFPRRD Site 4903
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de TNAMNQTSNH S HADGQRYYRP Site 4518
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei PSALGSLAGS P VISATNTLGT Site 3989
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ALNVCSLSSP D STLSTSSSGQ Site 4623
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SQLGDDDLKE T GFHLTTTNQG Site 4901
Candida.dubliniensis.IME2 PVFQDSDDGY E NYFGEYIAKQ Site 4841
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a NDISSMSTEH T LASDTDSSLD Site 4903
Aspergillus.niger.IME2 SPIESTKRQS M PQGSIRSMGE Site 4763
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge RELDIEEWKR L TYEEVTCFVP Site 4903
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d NLTNSNLMAA N LSSNLFHPSV Site 3550
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. PNVRLQPEAG E SMRAFGKNNS Site 4903
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein PSPLGPLAGS P VIAAANPLGM Site 3989
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty AQLEKQQQLQ Q QQQQQQQQRQ Site 3895
Schizosaccharomyces.japonicus.IME2 LVLVSPTPST A SSSGGSIAQP Site 4780
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --MDVEQNVD S WREHIFRELT Site 4903
Gallus.gallus.CDK1 ---------- - -----DLDKS  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P VPPHQRSVLA A RGLDIDNFTP Site 4902
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - --LKPVSVKP  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. SGRPLPTLEM D GPMGTGEVST Site 4903
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. VDRTLDEWKR V TYKEVLSFKP Site 4899
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 DVIGPPLSRD L GHELALSSSL Site 4803
Debaryomyces.hansenii.SKY1 ---------- V VLERPVGGSG Site 3630
Saccharomyces.cerevisiae.IME2 IEIINKDEAD N MEQLFFDLEI Site 4819
Schizosaccharomyces.japonicus.b.IME2 TTNTSFNQSK P GSIIQPKRQP Site 4745
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------S V DSHRPSGQKG Site 4906
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ---QPSSENA  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a AGKEREKNQG F DFDSFIAGTI Site 4727
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - --NLNSHLPS  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST VETELGHVPL V ERPAIEERLK Site 4903
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk VNLPLEEWKR L THEELTSFEP Site 4903
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de IMPPINLTSS N LLAANLSSNL Site 3544
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ELIYKEVLEW E ERTKNGVIRG Site 4903
Candida.albicans.IME2 PVFQDSDDGY E NYFGEYIAKQ Site 4841
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----KQEHFT  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - -----PLLMP  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. RDLLIDEWKS L TYDEVISFVP Site 4903
Kluyveromyces.lactis.IME2 NPPTLDVDDD D DEHDSIDMDH Site 3978
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina GPVAQPTGPQ P QSAGSTSGPV Site 4445
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. NDISSMSTDQ T LASDTDSSLE Site 4903
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. KERTLEEWKE L TYQEVLSFKP Site 4899
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - --LEQLDKDK  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. KERTLEEWKE L TYQEVLSFKP Site 4899
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- K RKARNEGRNR Site 4903
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - --CRNSGSPE  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SGGSQFKQLG R DEPIIVGPGN Site 4867
Neurospora.crassa.IME2 TLESLEKTLR D PQPVAEVPPM Site 4750
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - --------KV  
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --LMPTFPHH R NKRAASTSTG Site 4903
Ashbya.gossypii.IME2 NGQHDDNDND K SNFRNVGDGR Site 3964
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi KTAKTLYERY N CGEGQDSSSS Site 4903
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos VVGIANKLKA N LMSETNGSIP Site 3988
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p KLLEFDENVE L GHLSPDELSS Site 4903
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RLVKRNQESA G VLPAEGANGP Site 4748
Schizosaccharomyces.pombe.b.IME2 SENEQIDYLL T SIDYLPSYKP Site 4806
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a FDMELDDLPK E KLKELIFEET Site 4904
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom EACQSTLNID R MCSLSSPDST Site 4615
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- N GGASDAAGSK Site 3321
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas DLTGRQDTSR M STSQIPGRVA Site 4903
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac REHTIEEWKE L IYKEVMDLEE Site 4894
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable VVVLLLRSIQ L CPGRVLLVNN Site 4783
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ---------A  
Yarrowia.lipolytica.IME2 ASSYDQMPPP P LPLPKVRVTA Site 3966
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil NRRILAAAAA A AAAVSGNNAS Site 4903
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - -----DRDQR  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly VPSHMRPVLA S KGLDIDNFTP Site 4902
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk QKLIPSHARD A LPVKLDDFVP Site 4904
Species Residue at Site 2509
in 'muscle'
msaprobs

The residue for every species at site 2509 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro AQLQQQLQQQ Q MQQQQQQQQQ Site 3910
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo INPQSAAFKS F ISSTVAQPSE Site 4904
Scheffersomyces.stipitis.SKY1 ---------- V VLERPVGGSG Site 3630
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 10:38, July 11th 2020
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