cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2508 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2508 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2508 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2508 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 NYMLSTAEYN A TNKSMPMFME Site 4733
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge SFDFEQHALT E EQMKELIYRE Site 4903
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 MNPLNPNQLK G ASSEGTFSFS Site 4902
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ERPRTSSRTG S ASRRAVASSS Site 3265
Chlamydomonas.reinhardtii.LF4 NLSLGKANMT G STVGGAAHAS Site 4698
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g NKAILPPHVY E SLDVDINNFE Site 4902
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ---LEQLDKD  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ANRYQLQPDD S HYDEEREASK Site 3260
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho KVRVVPPTTT S GGLIMTSDYQ Site 4872
Schizosaccharomyces.octosporus.b.IME2 SCELVESRLL P VYEQQSSHLM Site 4763
Candida.albicans.MAPK3..Extracellular.signal.regul PEDFFDFDKM K DQLTIEDLKK Site 4903
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - --------QV  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 NVVSNSPNAS H VLNAGIGGKD Site 4902
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ------DQWK  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----GLTPEE  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ---------N  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ETTEKTKDSP T KHVQHSGDQQ Site 3945
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PVSVITIRSD T DEEEDNKYKP Site 4625
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar LPQLSSSNVL P ALDSKKYFCK Site 4902
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----QPCADN  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM NDDISRDALK S LIFEETLKFK Site 4905
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca DAPMDHATHS K AQGSIDPHTR Site 4902
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 MLQSLTQGQS T SNQFYLQQNK Site 3256
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. DEQFRQLLST P SYNNVDSDQS Site 3302
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - VTTQNDAENV  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d FSLKEIQLQK D PGYRGLAFQQ Site 4901
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. YTTVLIGTQQ F SLVQNNFHWY Site 4900
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -NDISSMSTD Q TLASDTDSSL Site 4902
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 DGEKAEKGNR A SNASCLHDSR Site 3577
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -NDISSMSTD Q TLASDTDSSL Site 4902
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. HEKLTVDEWK Q HIYKEIVNFS Site 4898
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo CINPQSAAFK S FISSTVAQPS Site 4903
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar NADIVIPPIN Q NVSPTMSSMV Site 3563
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -GDASSMSTD P TLPSDTDSSL Site 4902
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d LSSAPQELNP A VTAALLQLLS Site 3902
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. RLSGMTKLSS C SSPALRSVLG Site 4866
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. SGNPLPAHLY Q FTPDEVEAMT Site 4903
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G NNKDLPEDLF R FLPSEIEVMS Site 4903
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ---LEQLDKD  
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 IPSSSLFAQS A GSSRRVTAVS Site 3280
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO TIHDTPSPTA V ITISDSEDEG Site 4497
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - --------QV  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl CINPQSAAFK S FISSTVAQPS Site 4903
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 LPQLTGSSIL P ALDNKKYYCD Site 4902
Homo.sapiens.HIPK3..Homeodomain.interacting.protei QSTLNIDRMC S LSSPDSTLST Site 4618
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O YSQLGDDDLK E TGFHLTTTNQ Site 4900
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d NLVVGQGVPT R ASSLQLLSPQ Site 4360
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - --------NT  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O YSQLGDDDLK E TGFHLTTTNQ Site 4900
Naegleria.gruberi.LF4 KKPVQNQQGI T SYGKNMSNSN Site 4769
Saccharomyces.bayanus.IME2 DIEIINKDEA D NMEQLFFDLE Site 4818
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----QPCAEN  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --------RL T FTEILTFQPA Site 4902
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQQQQQQQQ I QSQPEPIQVD Site 4902
Dictyostelium.discoideum.DYRK1..Probable.serine.th KKASMKDKSP H SNISNILNDS Site 3917
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos SASTLPGTGA Q LPPLPRCLGR Site 3920
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos SSSASKLRTN L AQMTDANGNI Site 3987
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d SREGASSFHT R QKSEGGVYHD Site 4518
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a QLPPPGRGER P PGATGQPPSA Site 4760
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ARAASNLAMM C NSGRKLDVSE Site 4902
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos SGKSETVAGS E MSAEQQSTSS Site 3987
Aspergillus.nidulans.IME2 PVSITTPVEA S KRQSMPQGSI Site 4761
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LCINPQSAAY K NFASSSVAQA Site 4903
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SLKSDPNLST A STAKQYYLKQ Site 4726
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -NDISSMSTD Q TLASDTDSSL Site 4902
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. FNFKSHELKG V PAEILVKLVP Site 4901
Penicillium.marneffei.IME2 SIPNQSPSKR Q SVPQVPMRSM Site 4763
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -EPEADPYDQ S FESRDLEIEE Site 4902
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a YGRSCDYKVG S PSYLDKLLWR Site 4770
Drosophila.melanogaster.MAK AAAVQDPKMG A LKSDDLDLIL Site 4723
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de LSSAPQELNP A VTAALLQLLS Site 3904
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -KPIPYPPRL  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -----LMPTF P HHRNKRAAPA Site 4902
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -NDISSMSTD Q TLASDTDSSL Site 4902
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ISSMSTEQTL A SDTDSSLDAS Site 4905
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ---LEQLDKD  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p PERRISEDDS E VSSKRVLSTS Site 4902
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TTLTPSSQAL T ETPTSSDWQS Site 4902
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. WKELIYKEVM D WEERSKNGVV Site 4903
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki TPSPLGPLAG S PVIAAANPLG Site 3988
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a YGRSCDYKVG S PSYLDKLLWR Site 4770
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d LKEVQLQKEA N IRSTSMPDSG Site 4902
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. TPSPLGPLAG S PVIAAANPLG Site 3988
Yarrowia.lipolytica.SSN3..Serine.threonine.protein SCEDSDIKTM T YQGTKRGSQG Site 4902
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. VINYTPILRK D SKRKSGMSIK Site 4903
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos SASSLPGTGA Q LPPQPRYLGR Site 3920
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---RANGTEQ A DGQGASNSAS Site 3988
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --RLPNGNAL P PLFDFTSHEL Site 4901
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SNQSSSSNSN A NVSSNLNSHS Site 4867
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot TEALKEKENL L IGIKRKRDSI Site 4902
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str GEHTVEEWRA M LFAELQNYYR Site 4902
Debaryomyces.hansenii.IME2 ISQGRDSFDF E NKCIKNIGDD Site 4803
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati SLPPLFNWLP G ELDEVPADIV Site 4903
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAAAAAAVQV N GTNIVSGSSS Site 4903
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ------MRSR  
Caenorhabditis.briggsae.CDK1 ---------- - --DIDTSKLP  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PGPPHVHDFH V DRPLEESLLN Site 4902
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos PVVGIASKLK A NLMSETSGSI Site 3987
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ---NLDSHMS  
Monosiga.brevicollis.CDK1 ---------- - --------PG  
Saccharomyces.cerevisiae.SKY1 --IRVPDREL Y GSGSDIPGWF Site 3631
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP EDDFFDFDRR K EELTMLDLKE Site 4902
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --------RF S QHLELCNGAQ Site 4902
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AASGSTSVSS T GSGASVEGSA Site 4542
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ---------Q  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. NSAPLLQTAL L GNGERPPGAK Site 4757
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d GTIPGVQNYR V DEKTKKYCNP Site 3570
Dictyostelium.discoideum.CDK10..Probable.cyclin.de TNQNNQTNQN N QTNQNNKTSQ Site 4902
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d KSEGGVYHDP H SDDGTAPKEN Site 4438
Ajellomyces.capsulatus.CDK1 ---------- - -----AGSSA  
Dictystelium.discoideum.MAPK3..Extracellular.signa NFNLSRIQSS S ELFNLLQQQK Site 4899
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ---NLDSHLP  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --LMPTFPHH R NKRATPATSL Site 4902
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac VNDVSSMSTD P TLASDTDSSL Site 4902
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. VDEWKQHIYK E ISNFSPIARK Site 4902
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri PLCINPHSAA F KTFIRSTAWH Site 4903
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -NDISSMSTD Q TLASDTDSSL Site 4902
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 VQPINLEHTN G TSTTNIAGQG Site 4827
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen SRELDIEEWK R QTYEEMISFE Site 4902
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ------LKHW  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar SRDVTAAFHS R RKSEGGAYHD Site 4552
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. LIDSLPLLHF E ESELQGLSSN Site 4903
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KKADESLSKD Q QKDSITFGTC Site 4668
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U AKLLSSVASA S HSSASSAGTA Site 4747
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d LPQLTSSRIL P ALDNKKYHCS Site 4902
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SYNPSSQALT E AQTGQDWQPS Site 4902
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - --NMDTSKLP  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro QSMAGGRLPS S SNFRPASGNI Site 4902
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d EQQNLNLGIK R KRTEGMDQKD Site 4906
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PGPPHIHDFH V DRPLEESLLN Site 4902
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi LKAAKTLYEH Y SGGESHNSSS Site 4902
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen SPPANATAAS D TNAGDRGQTN Site 4902
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable QVVALLLQSI R LCQDRALLVN Site 4797
Aspergillus.fumigatus.IME2 LGNVPVQITS T GDVSKRQSMP Site 4765
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan KVRVVPPTAT S SGLIMTSDYQ Site 4872
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ------NTVT  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha REKLSIEEWK K HIYKEILSFS Site 4898
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LCINPQSAAY K NFASSSVAQA Site 4903
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma TSTVSKQRKN V ISCVTVHDSP Site 4642
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina FAMELDDLPK E RLKELIFQET Site 4902
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d LKEIQLQKDP G FRNSSYPETG Site 4902
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -----LMPTF P HHRNKRAAPA Site 4902
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de LPQLASSTVF P AVENRRNYNN Site 4902
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EREHTVEQWK E LIYEEVMDYE Site 4904
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------S N DFSLVPFSLS Site 4899
Candida.glabrata.IME2 EIQNELSKPI T FEEQNANNIE Site 3991
Homo.sapiens.MAK..Serine.threonine.protein.kinase. SLKSDSELST A PTSKQYYLKQ Site 4727
Schizosaccharomyces.pombe.IME2 NFIISSSEDS T SPKAKEFDRP Site 4742
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P PEDFFDFDKR K DELSIDDLKK Site 4903
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom VPDSGPEPIL A FYGSRLTGRH Site 4784
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ---QTPTGKQ  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d FSLKEIQLQK D PGYRGLAFQH Site 4901
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d LLPLIPGSHI S PTPDGRKQVV Site 4903
Branchiostoma.floridae.CDK1 ---------- - ---------D  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ---------T  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH NQKLIPSHAR D ALPVKLDDFV Site 4903
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD VNAANSNHRL E QLDAHNSGFS Site 4873
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -RLPSGRALP Q LEMDGPNEVS Site 4902
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ESVLDLKPSE P VGTGNSAPTQ Site 4705
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----GLTPEE  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HHHHGQQALG N RTRPRVYNSP Site 3871
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PQPACPPPAP A AGPAAPQTTA Site 4476
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. SRDLLIDEWK S LTYDEVISFV Site 4902
Lachancea.thermotolerans.SKY1 --VALSERKL Y QSGADIPGWS Site 3631
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LAERERGQGF D FDSFIAGTIQ Site 4727
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. DVDRTLEEWK R VTYKEVLSFK Site 4898
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PSPPVSVITI R SDTDEEEDSK Site 4617
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. TPSPLGPLAG S PVISATTTLG Site 3988
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ------EEQH  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. FAVSGVKLKP E MCDLSASYRK Site 4902
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD RLYNDIIKKK K EERKKQTNPT Site 4902
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HHHHGQQALG N RTRPRVYNSP Site 3871
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen STPTNATAAS D ANTGDRGQTN Site 4902
Drosophila.melanogaster.GSK3H..Putative.glycogen.s RKTEDSQKPA T AALSKSPGPS Site 4538
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD PNYKSRQNQT D RKKPEKKAEN Site 4903
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 EIQDNVHLYS L SRDPEFSSEP Site 4001
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a FKFDMELDDL P KEKLKELIFE Site 4902
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. FTVSGVRLKP E MCDLLASYQK Site 4902
Cryptococcus.neoformans.IME2 KRNQLIESRS Q LKTKGEIEYS Site 4724
Homo.sapiens.HIPK4..Homeodomain.interacting.protei VPDSGPEPIL A FYSSRLAGRH Site 4783
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ISGLGQEIQL N SSQEVSCDYK Site 4854
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PVSVITIRSD T DEEEDNKYKP Site 4625
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQANQQNQ Q SQQQQQQQQM Site 4835
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep RMQPPHEFTV D RPLHESVVDP Site 4902
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. YLPQLASSNM S PAPEMKKHNK Site 4903
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----HGSSYY  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. KLSGVVRLSS Y SSPTLQSVLG Site 4867
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----NNYNED  
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca QPNIANISAG S PVIPAPNTMA Site 3988
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a GPVSQSTGPL Q PAGSIPGPAS Site 4451
Mus.musculus.ICK..Serine.threonine.protein.kinase. LDLKPSESVG T GTTVSTQASS Site 4708
Saccharomyces.castelli.IME2 ETHIKIPNEL D QNVSLYFGNN Site 3986
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ALKEPANPTV A TKRKRAEALE Site 4903
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. VPNVRLQPEA G ESMRAFGKNN Site 4902
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly LFDFTEDELR A CTPEMRARLV Site 4901
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --LLDGESTD E DDVVSSSEAD Site 4902
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli EALKEKENLL I GIKRKRDSIE Site 4903
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho PRRKGSQITQ Q STNQSRNPAT Site 4903
Homo.sapiens.HIPK2..Homeodomain.interacting.protei TSTVSKQRKN V ISCVTVHDSP Site 4640
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 LDEFPIYQDL D DGYENYFDEY Site 4835
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin NAEPNAKRVR L SGAGNQQDFH Site 4881
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G AHSSTSGNHY S GGAGGTSSSL Site 4901
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - -RMVSSNSPT  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LKEIQLQKEA S LRSSSMPDSG Site 4902
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - --------QV  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d LKEIQLQKDP G FRNSSYPETG Site 4902
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA HEKLSIEEWK K HIYKEILSFS Site 4898
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NSGHQLSQQQ Site 4868
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF IISAGGISLG G VSAARSGGYG Site 4781
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SQNSSSSTAP H DTPEPSTSAT Site 4902
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -----RLSFK E VRSFVPFPRR Site 4902
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ETNAMNQTSN H SHADGQRYYR Site 4517
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei TPSALGSLAG S PVISATNTLG Site 3988
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SALNVCSLSS P DSTLSTSSSG Site 4622
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d YSQLGDDDLK E TGFHLTTTNQ Site 4900
Candida.dubliniensis.IME2 VPVFQDSDDG Y ENYFGEYIAK Site 4840
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a INDISSMSTE H TLASDTDSSL Site 4902
Aspergillus.niger.IME2 TSPIESTKRQ S MPQGSIRSMG Site 4762
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge SRELDIEEWK R LTYEEVTCFV Site 4902
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d INLTNSNLMA A NLSSNLFHPS Site 3549
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. VPNVRLQPEA G ESMRAFGKNN Site 4902
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein TPSPLGPLAG S PVIAAANPLG Site 3988
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty RAQLEKQQQL Q QQQQQQQQQR Site 3894
Schizosaccharomyces.japonicus.IME2 GLVLVSPTPS T ASSSGGSIAQ Site 4779
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---MDVEQNV D SWREHIFREL Site 4902
Gallus.gallus.CDK1 ---------- - ------DLDK  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P HVPPHQRSVL A ARGLDIDNFT Site 4901
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ---LKPVSVK  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. PSGRPLPTLE M DGPMGTGEVS Site 4902
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. DVDRTLDEWK R VTYKEVLSFK Site 4898
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 SDVIGPPLSR D LGHELALSSS Site 4802
Debaryomyces.hansenii.SKY1 ---------- - VVLERPVGGS  
Saccharomyces.cerevisiae.IME2 DIEIINKDEA D NMEQLFFDLE Site 4818
Schizosaccharomyces.japonicus.b.IME2 NTTNTSFNQS K PGSIIQPKRQ Site 4744
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- S VDSHRPSGQK Site 4905
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----QPSSEN  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a LAGKEREKNQ G FDFDSFIAGT Site 4726
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ---NLNSHLP  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST DVETELGHVP L VERPAIEERL Site 4902
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk NVNLPLEEWK R LTHEELTSFE Site 4902
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de MIMPPINLTS S NLLAANLSSN Site 3543
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act KELIYKEVLE W EERTKNGVIR Site 4902
Candida.albicans.IME2 VPVFQDSDDG Y ENYFGEYIAK Site 4840
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - -----KQEHF  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ------PLLM  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. SRDLLIDEWK S LTYDEVISFV Site 4902
Kluyveromyces.lactis.IME2 MNPPTLDVDD D DDEHDSIDMD Site 3977
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PGPVAQPTGP Q PQSAGSTSGP Site 4444
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -NDISSMSTD Q TLASDTDSSL Site 4902
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. AKERTLEEWK E LTYQEVLSFK Site 4898
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ---LEQLDKD  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. AKERTLEEWK E LTYQEVLSFK Site 4898
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - KRKARNEGRN  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ---CRNSGSP  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PSGGSQFKQL G RDEPIIVGPG Site 4866
Neurospora.crassa.IME2 DTLESLEKTL R DPQPVAEVPP Site 4749
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ---------K  
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---LMPTFPH H RNKRAASTST Site 4902
Ashbya.gossypii.IME2 HNGQHDDNDN D KSNFRNVGDG Site 3963
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi LKTAKTLYER Y NCGEGQDSSS Site 4902
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos PVVGIANKLK A NLMSETNGSI Site 3987
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LKLLEFDENV E LGHLSPDELS Site 4902
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace LRLVKRNQES A GVLPAEGANG Site 4747
Schizosaccharomyces.pombe.b.IME2 FSENEQIDYL L TSIDYLPSYK Site 4805
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a KFDMELDDLP K EKLKELIFEE Site 4903
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom CEACQSTLNI D RMCSLSSPDS Site 4614
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - NGGASDAAGS  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas SDLTGRQDTS R MSTSQIPGRV Site 4902
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EREHTIEEWK E LIYKEVMDLE Site 4893
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable QVVVLLLRSI Q LCPGRVLLVN Site 4782
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 SASSYDQMPP P PLPLPKVRVT Site 3965
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil VNRRILAAAA A AAAAVSGNNA Site 4902
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ------DRDQ  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly LVPSHMRPVL A SKGLDIDNFT Site 4901
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk NQKLIPSHAR D ALPVKLDDFV Site 4903
Species Residue at Site 2508
in 'muscle'
msaprobs

The residue for every species at site 2508 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QAQLQQQLQQ Q QMQQQQQQQQ Site 3909
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo CINPQSAAFK S FISSTVAQPS Site 4903
Scheffersomyces.stipitis.SKY1 ---------- - VVLERPVGGS  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:47, November 16th 2019
Questions/Comments? help@phylobot.com