cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2504 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2504 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2504 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2504 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 LKLRNYMLST A EYNATNKSMP Site 4729
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge MTPFSFDFEQ H ALTEEQMKEL Site 4899
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 IDEAMNPLNP N QLKGASSEGT Site 4898
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ERTMERPRTS S RTGSASRRAV Site 3261
Chlamydomonas.reinhardtii.LF4 PPIANLSLGK A NMTGSTVGGA Site 4694
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RPNLNKAILP P HVYESLDVDI Site 4898
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - -------LEQ  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 AQQQANRYQL Q PDDSHYDEER Site 3256
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PPLKKVRVVP P TTTSGGLIMT Site 4868
Schizosaccharomyces.octosporus.b.IME2 PETISCELVE S RLLPVYEQQS Site 4759
Candida.albicans.MAPK3..Extracellular.signal.regul SDKIPEDFFD F DKMKDQLTIE Site 4899
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 DSKQNVVSNS P NASHVLNAGI Site 4898
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - --------GL  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos EITKETTEKT K DSPTKHVQHS Site 3941
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TPSPPVSVIT I RSDTDEEEDN Site 4621
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar GFQYLPQLSS S NVLPALDSKK Site 4898
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - --------QP  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM INMENDDISR D ALKSLIFEET Site 4901
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca LDNADAPMDH A THSKAQGSID Site 4898
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ENTNMLQSLT Q GQSTSNQFYL Site 3252
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. TTTTDEQFRQ L LSTPSYNNVD Site 3298
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----VTTQND  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d TASIFSLKEI Q LQKDPGYRGL Site 4897
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. NFHWYTTVLI G TQQFSLVQNN Site 4896
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SSSI-NDISS M STDQTLASDT Site 4898
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 GSKIDGEKAE K GNRASNASCL Site 3573
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SSSI-NDISS M STDQTLASDT Site 4898
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. DSLEHEKLTV D EWKQHIYKEI Site 4894
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo RVPLCINPQS A AFKSFISSTV Site 4899
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar HYIKNADIVI P PINQNVSPTM Site 3559
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SSSS-GDASS M STDPTLPSDT Site 4898
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d VEGDLSSAPQ E LNPAVTAALL Site 3898
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LPKLRLSGMT K LSSCSSPALR Site 4862
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -KLPSGNPLP A HLYQFTPDEV Site 4899
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -KLPNNKDLP E DLFRFLPSEI Site 4899
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - -------LEQ  
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 RDSMIPSSSL F AQSAGSSRRV Site 3276
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QPTITIHDTP S PTAVITISDS Site 4493
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl RVPLCINPQS A AFKSFISSTV Site 4899
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 KLQYLPQLTG S SILPALDNKK Site 4898
Homo.sapiens.HIPK3..Homeodomain.interacting.protei CEACQSTLNI D RMCSLSSPDS Site 4614
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O GGLGYSQLGD D DLKETGFHLT Site 4896
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d GQENNLVVGQ G VPTRASSLQL Site 4356
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O GGLGYSQLGD D DLKETGFHLT Site 4896
Naegleria.gruberi.LF4 KPTNKKPVQN Q QGITSYGKNM Site 4765
Saccharomyces.bayanus.IME2 QLTNDIEIIN K DEADNMEQLF Site 4814
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - --------QP  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - -RLTFTEILT  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki LQKQQQQQQQ Q QQQIQSQPEP Site 4898
Dictyostelium.discoideum.DYRK1..Probable.serine.th VDQMKKASMK D KSPHSNISNI Site 3913
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos QAPISASTLP G TGAQLPPLPR Site 3916
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos LPPPSSSASK L RTNLAQMTDA Site 3983
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d VKESSREGAS S FHTRQKSEGG Site 4514
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a DPLFQLPPPG R GERPPGATGQ Site 4756
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific PNSIARAASN L AMMCNSGRKL Site 4898
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos LTEASGKSET V AGSEMSAEQQ Site 3983
Aspergillus.nidulans.IME2 LGNVPVSITT P VEASKRQSMP Site 4757
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se YGVALCINPQ S AAYKNFASSS Site 4899
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. HASVSLKSDP N LSTASTAKQY Site 4722
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SSSV-NDISS M STDQTLASDT Site 4898
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. LPPLFNFKSH E LKGVPAEILV Site 4897
Penicillium.marneffei.IME2 PQITSIPNQS P SKRQSVPQVP Site 4759
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -----EPEAD P YDQSFESRDL Site 4898
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a FEADYGRSCD Y KVGSPSYLDK Site 4766
Drosophila.melanogaster.MAK RSRAAAAVQD P KMGALKSDDL Site 4719
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de VEGDLSSAPQ E LNPAVTAALL Site 3900
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -----KPIPY  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------L M PTFPHHRNKR Site 4898
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SSSV-NDISS M STDQTLASDT Site 4898
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SINDISSMST E QTLASDTDSS Site 4901
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - -------LEQ  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p PIHYPERRIS E DDSEVSSKRV Site 4898
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen PAGTTTLTPS S QALTETPTSS Site 4898
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. AIEEWKELIY K EVMDWEERSK Site 4899
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki SSVPTPSPLG P LAGSPVIAAA Site 3984
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a FEADYGRSCD Y KVGSPSYLDK Site 4766
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d SIFALKEVQL Q KEANIRSTSM Site 4898
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. SSVPTPSPLG P LAGSPVIAAA Site 3984
Yarrowia.lipolytica.SSN3..Serine.threonine.protein PRRISCEDSD I KTMTYQGTKR Site 4898
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. TYEEVINYTP I LRKDSKRKSG Site 4899
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos QAPASASSLP G TGAQLPPQPR Site 3916
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -------RAN G TEQADGQGAS Site 3984
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ------RLPN G NALPPLFDFT Site 4897
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD AISSSNQSSS S NSNANVSSNL Site 4863
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot PNSSTEALKE K ENLLIGIKRK Site 4898
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str LLVDGEHTVE E WRAMLFAELQ Site 4898
Debaryomyces.hansenii.IME2 AGNSISQGRD S FDFENKCIKN Site 4799
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati PNGRSLPPLF N WLPGELDEVP Site 4899
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ILAAAAAAAA A VQVNGTNIVS Site 4899
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ------DIDT  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PKAHPGPPHV H DFHVDRPLEE Site 4898
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos SKLPPVVGIA S KLKANLMSET Site 3983
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - -------NLD  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ------IRVP D RELYGSGSDI Site 3627
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP AAPLEDDFFD F DRRKEELTML Site 4898
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - -RFSQHLELC  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AASIAASGST S VSSTGSGASV Site 4538
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. VPRQNSAPLL Q TALLGNGERP Site 4753
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d NAGMGTIPGV Q NYRVDEKTKK Site 3566
Dictyostelium.discoideum.CDK10..Probable.cyclin.de QNNQTNQNNQ T NQNNQTNQNN Site 4898
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d HTRQKSEGGV Y HDPHSDDGTA Site 4434
Ajellomyces.capsulatus.CDK1 ---------- - ---------A  
Dictystelium.discoideum.MAPK3..Extracellular.signa LNNPNFNLSR I QSSSELFNLL Site 4895
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - -------NLD  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------LMPT F PHHRNKRATP Site 4898
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SSSSVNDVSS M STDPTLASDT Site 4898
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. EKLSVDEWKQ H IYKEISNFSP Site 4898
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GKRPPLCINP H SAAFKTFIRS Site 4899
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SSSA-NDISS M STDQTLASDT Site 4898
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 PSPLVQPINL E HTNGTSTTNI Site 4823
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen QSFESRELDI E EWKRQTYEEM Site 4898
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar VKDSSRDVTA A FHSRRKSEGG Site 4548
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. SNLSLIDSLP L LHFEESELQG Site 4899
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D EHTEKKADES L SKDQQKDSIT Site 4664
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U HMYKAKLLSS V ASASHSSASS Site 4743
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d GLQYLPQLTS S RILPALDNKK Site 4898
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PLTTSYNPSS Q ALTEAQTGQD Site 4898
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ------NMDT  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GSLPQSMAGG R LPSSSNFRPA Site 4898
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d EALKEQQNLN L GIKRKRTEGM Site 4902
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PKAHPGPPHI H DFHVDRPLEE Site 4898
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi PNSILKAAKT L YEHYSGGESH Site 4898
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen QAAASPPANA T AASDTNAGDR Site 4898
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable QQFEQVVALL L QSIRLCQDRA Site 4793
Aspergillus.fumigatus.IME2 DSAALGNVPV Q ITSTGDVSKR Site 4761
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan PPLKKVRVVP P TATSSGLIMT Site 4868
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha DSLEREKLSI E EWKKHIYKEI Site 4894
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S YGVALCINPQ S AAYKNFASSS Site 4899
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma KHAPTSTVSK Q RKNVISCVTV Site 4638
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina EPFTFAMELD D LPKERLKELI Site 4898
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d SIFSLKEIQL Q KDPGFRNSSY Site 4898
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------L M PTFPHHRNKR Site 4898
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de PPGYLPQLAS S TVFPAVENRR Site 4898
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S HSVDEREHTV E QWKELIYEEV Site 4900
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - --SNDFSLVP  
Candida.glabrata.IME2 RINEEIQNEL S KPITFEEQNA Site 3631
Homo.sapiens.MAK..Serine.threonine.protein.kinase. PAVTSLKSDS E LSTAPTSKQY Site 4723
Schizosaccharomyces.pombe.IME2 LKLRNFIISS S EDSTSPKAKE Site 4738
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P SEKIPEDFFD F DKRKDELSID Site 4899
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom TSHRVPDSGP E PILAFYGSRL Site 4780
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - -------QTP  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d TASIFSLKEI Q LQKDPGYRGL Site 4897
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d QQNQLLPLIP G SHISPTPDGR Site 4899
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RPDLNQKLIP S HARDALPVKL Site 4899
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD KHQKVNAANS N HRLEQLDAHN Site 4869
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -----RLPSG R ALPQLEMDGP Site 4898
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. LCRFESVLDL K PSEPVGTGNS Site 4701
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - --------GL  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HHHHHHHHGQ Q ALGNRTRPRV Site 3867
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act TGPLPQPACP P PAPAAGPAAP Site 4472
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. QSFESRDLLI D EWKSLTYDEV Site 4898
Lachancea.thermotolerans.SKY1 ------VALS E RKLYQSGADI Site 3627
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ASQQLAERER G QGFDFDSFIA Site 4723
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. DSFDDVDRTL E EWKRVTYKEV Site 4894
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U IPDTPSPPVS V ITIRSDTDEE Site 4613
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. SSVPTPSPLG P LAGSPVISAT Site 3984
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. EESLFAVSGV K LKPEMCDLSA Site 4898
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD EYRNRLYNDI I KKKKEERKKQ Site 4898
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HHHHHHHHGQ Q ALGNRTRPRV Site 3867
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen QAAASTPTNA T AASDANTGDR Site 4898
Drosophila.melanogaster.GSK3H..Putative.glycogen.s EESPRKTEDS Q KPATAALSKS Site 4534
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD MPDFPNYKSR Q NQTDRKKPEK Site 4899
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 AISREIQDNV H LYSLSRDPEF Site 3997
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AEAPFKFDME L DDLPKEKLKE Site 4898
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. EESLFTVSGV R LKPEMCDLLA Site 4898
Cryptococcus.neoformans.IME2 AVMQKRNQLI E SRSQLKTKGE Site 4720
Homo.sapiens.HIPK4..Homeodomain.interacting.protei TGHHVPDSGP E PILAFYSSRL Site 4779
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 VHPRISGLGQ E IQLNSSQEVS Site 4850
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TPSPPVSVIT I RSDTDEEEDN Site 4621
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQNQQQQAN Q QNQQSQQQQQ Site 4831
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep HSRQRMQPPH E FTVDRPLHES Site 4898
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. QGLQYLPQLA S SNMSPAPEMK Site 4899
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - --------HG  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. LPKLKLSGVV R LSSYSSPTLQ Site 4863
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - --------NN  
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca TPSTQPNIAN I SAGSPVIPAP Site 3984
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a STPTGPVSQS T GPLQPAGSIP Site 4447
Mus.musculus.ICK..Serine.threonine.protein.kinase. FESVLDLKPS E SVGTGTTVST Site 4704
Saccharomyces.castelli.IME2 ELQRETHIKI P NELDQNVSLY Site 3982
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep CPVEALKEPA N PTVATKRKRA Site 4899
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. SIFTVPNVRL Q PEAGESMRAF Site 4898
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly PLPPLFDFTE D ELRACTPEMR Site 4897
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------LLDG E STDEDDVVSS Site 4898
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli NSSTEALKEK E NLLIGIKRKR Site 4899
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho YLAPPRRKGS Q ITQQSTNQSR Site 4899
Homo.sapiens.HIPK2..Homeodomain.interacting.protei KHAPTSTVSK Q RKNVISCVTV Site 4636
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 NVSMLDEFPI Y QDLDDGYENY Site 4831
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQMNAEPNA K RVRLSGAGNQ Site 4877
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SQDHAHSSTS G NHYSGGAGGT Site 4897
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - -----RMVSS  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de SIFALKEIQL Q KEASLRSSSM Site 4898
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d SIFSLKEIQL Q KDPGFRNSSY Site 4898
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA DSLEHEKLSI E EWKKHIYKEI Site 4894
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NNNNNSGHQL Site 4864
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF DASSIISAGG I SLGGVSAARS Site 4777
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA PPHVSQNSSS S TAPHDTPEPS Site 4898
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------R L SFKEVRSFVP Site 4898
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SEFSETNAMN Q TSNHSHADGQ Site 4513
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei STVPTPSALG S LAGSPVISAT Site 3984
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U DTCQSALNVC S LSSPDSTLST Site 4618
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d GGLGYSQLGD D DLKETGFHLT Site 4896
Candida.dubliniensis.IME2 TTGSVPVFQD S DDGYENYFGE Site 4836
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a QSSSINDISS M STEHTLASDT Site 4898
Aspergillus.niger.IME2 PVQITSPIES T KRQSMPQGSI Site 4758
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge QSFESRELDI E EWKRLTYEEV Site 4898
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d TMPPINLTNS N LMAANLSSNL Site 3545
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. SIFTVPNVRL Q PEAGESMRAF Site 4898
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein SSVPTPSPLG P LAGSPVIAAA Site 3984
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QQSQRAQLEK Q QQLQQQQQQQ Site 3890
Schizosaccharomyces.japonicus.IME2 VKLSGLVLVS P TPSTASSSGG Site 4775
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -------MDV E QNVDSWREHI Site 4898
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P NFTRHVPPHQ R SVLAARGLDI Site 4897
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - -------LKP  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --RLPSGRPL P TLEMDGPMGT Site 4898
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. DSFDDVDRTL D EWKRVTYKEV Site 4894
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 KRDTSDVIGP P LSRDLGHELA Site 4798
Debaryomyces.hansenii.SKY1 ---------- - ----VVLERP  
Saccharomyces.cerevisiae.IME2 QLTNDIEIIN K DEADNMEQLF Site 4814
Schizosaccharomyces.japonicus.b.IME2 TNTTNTTNTS F NQSKPGSIIQ Site 4740
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ---SVDSHRP  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - --------QP  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ASQQLAGKER E KNQGFDFDSF Site 4722
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - -------NLN  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST IFDFDVETEL G HVPLVERPAI Site 4898
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk DSFDNVNLPL E EWKRLTHEEL Site 4898
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de AGGCMIMPPI N LTSSNLLAAN Site 3539
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act VEEWKELIYK E VLEWEERTKN Site 4898
Candida.albicans.IME2 TTGSVPVFQD S DDGYENYFGE Site 4836
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ---------K  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. QSFESRDLLI D EWKSLTYDEV Site 4898
Kluyveromyces.lactis.IME2 TTNQMNPPTL D VDDDDDEHDS Site 3973
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina TSPPPGPVAQ P TGPQPQSAGS Site 4440
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SSAV-NDISS M STDQTLASDT Site 4898
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ESVEAKERTL E EWKELTYQEV Site 4894
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - -------LEQ  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ESVEAKERTL E EWKELTYQEV Site 4894
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----KRKARN  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - -------CRN  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SPKPPSGGSQ F KQLGRDEPII Site 4862
Neurospora.crassa.IME2 PVPKDTLESL E KTLRDPQPVA Site 4745
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------LMP T FPHHRNKRAA Site 4898
Ashbya.gossypii.IME2 TITNHNGQHD D NDNDKSNFRN Site 3959
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PNSILKTAKT L YERYNCGEGQ Site 4898
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos SKLPPVVGIA N KLKANLMSET Site 3983
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ITTDLKLLEF D ENVELGHLSP Site 4898
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace PPSHLRLVKR N QESAGVLPAE Site 4743
Schizosaccharomyces.pombe.b.IME2 ESVFFSENEQ I DYLLTSIDYL Site 4801
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a EAPFKFDMEL D DLPKEKLKEL Site 4899
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GSLDCEACQS T LNIDRMCSLS Site 4610
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----NGGASD  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas NVSSSDLTGR Q DTSRMSTSQI Site 4898
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac KQLDEREHTI E EWKELIYKEV Site 4889
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable SQFEQVVVLL L RSIQLCPGRV Site 4778
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 QTPDSASSYD Q MPPPPLPLPK Site 3961
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GGLGVNRRIL A AAAAAAAAVS Site 4898
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly LNHKLVPSHM R PVLASKGLDI Site 4897
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RPDLNQKLIP S HARDALPVKL Site 4899
Species Residue at Site 2504
in 'muscle'
msaprobs

The residue for every species at site 2504 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QQQKQAQLQQ Q LQQQQMQQQQ Site 3905
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo RVPLCINPQS A AFKSFISSTV Site 4899
Scheffersomyces.stipitis.SKY1 ---------- - ----VVLERP  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 13:53, December 4th 2020
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