cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2500 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2500 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2500 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2500 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 TPLNLKLRNY M LSTAEYNATN Site 4725
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge EPVCMTPFSF D FEQHALTEEQ Site 4895
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 NNLEIDEAMN P LNPNQLKGAS Site 4894
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ DRSGERTMER P RTSSRTGSAS Site 3257
Chlamydomonas.reinhardtii.LF4 EASLPPIANL S LGKANMTGST Site 4690
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ELSIRPNLNK A ILPPHVYESL Site 4894
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 QQAQAQQQAN R YQLQPDDSHY Site 3252
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho HTQGPPLKKV R VVPPTTTSGG Site 4864
Schizosaccharomyces.octosporus.b.IME2 KIKQPETISC E LVESRLLPVY Site 4755
Candida.albicans.MAPK3..Extracellular.signal.regul -EPISDKIPE D FFDFDKMKDQ Site 4895
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 DTLKDSKQNV V SNSPNASHVL Site 4894
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos RKADEITKET T EKTKDSPTKH Site 3937
Homo.sapiens.HIPK1..Homeodomain.interacting.protei IIPDTPSPPV S VITIRSDTDE Site 4617
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar KHVPGFQYLP Q LSSSNVLPAL Site 4894
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM VPFRINMEND D ISRDALKSLI Site 4897
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca QSTSLDNADA P MDHATHSKAQ Site 4894
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 QPSVENTNML Q SLTQGQSTSN Site 3248
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. SNIATTTTDE Q FRQLLSTPSY Site 3294
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - --------VT  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d QLEDTASIFS L KEIQLQKDPG Site 4893
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LVQNNFHWYT T VLIGTQQFSL Site 4892
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SLPPSSSI-N D ISSMSTDQTL Site 4894
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 FKIKGSKIDG E KAEKGNRASN Site 3569
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SPPPSSSI-N D ISSMSTDQTL Site 4894
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. QPFDDSLEHE K LTVDEWKQHI Site 4890
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QKGNRVPLCI N PQSAAFKSFI Site 4895
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar SSNLHYIKNA D IVIPPINQNV Site 3555
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. QAHTSSSS-G D ASSMSTDPTL Site 4894
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PPPLVEGDLS S APQELNPAVT Site 3894
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. SLMELPKLRL S GMTKLSSCSS Site 4812
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -----KLPSG N PLPAHLYQFT Site 4895
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -----KLPNN K DLPEDLFRFL Site 4895
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 SSSARDSMIP S SSLFAQSAGS Site 3272
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QHVKQPTITI H DTPSPTAVIT Site 4489
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl QKGNRVPLCI N PQSAAFKSFI Site 4895
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 TETSKLQYLP Q LTGSSILPAL Site 4894
Homo.sapiens.HIPK3..Homeodomain.interacting.protei GSLDCEACQS T LNIDRMCSLS Site 4610
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O RPPEGGLGYS Q LGDDDLKETG Site 4892
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d HRPHGQENNL V VGQGVPTRAS Site 4352
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O RPPEGGLGYS Q LGDDDLKETG Site 4892
Naegleria.gruberi.LF4 GTKQKPTNKK P VQNQQGITSY Site 4761
Saccharomyces.bayanus.IME2 SNIRQLTNDI E IINKDEADNM Site 4810
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - -----RLTFT  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQLLQKQQQ Q QQQQQQQIQS Site 4894
Dictyostelium.discoideum.DYRK1..Probable.serine.th NHKLVDQMKK A SMKDKSPHSN Site 3909
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos HKTHQAPISA S TLPGTGAQLP Site 3912
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos SISKLPPPSS S ASKLRTNLAQ Site 3979
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ARPSVKESSR E GASSFHTRQK Site 4510
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RQSSDPLFQL P PPGRGERPPG Site 4752
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ALQSPNSIAR A ASNLAMMCNS Site 4894
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos QLPHLTEASG K SETVAGSEMS Site 3979
Aspergillus.nidulans.IME2 DSAALGNVPV S ITTPVEASKR Site 4753
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se RPALYGVALC I NPQSAAYKNF Site 4895
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. NRNLHASVSL K SDPNLSTAST Site 4718
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SLPPSSSV-N D ISSMSTDQTL Site 4894
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. NGRFLPPLFN F KSHELKGVPA Site 4893
Penicillium.marneffei.IME2 ANPPPQITSI P NQSPSKRQSV Site 4755
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------E P EADPYDQSFE Site 4894
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a MERAFEADYG R SCDYKVGSPS Site 4762
Drosophila.melanogaster.MAK RLSGRSRAAA A VQDPKMGALK Site 4715
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PPPLVEGDLS S APQELNPAVT Site 3896
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ---------K  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - --LMPTFPHH  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SLPPSSSV-N D ISSMSTDQTL Site 4894
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SQSSSINDIS S MSTEQTLASD Site 4897
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p FLNQPIHYPE R RISEDDSEVS Site 4894
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen HLRSPAGTTT L TPSSQALTET Site 4894
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. EREHAIEEWK E LIYKEVMDWE Site 4895
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki MSGISSVPTP S PLGPLAGSPV Site 3980
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a MERAFEADYG R SCDYKVGSPS Site 4762
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d PDTTSIFALK E VQLQKEANIR Site 4894
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. MSGISSVPTP S PLGPLAGSPV Site 3980
Yarrowia.lipolytica.SSN3..Serine.threonine.protein YKYPPRRISC E DSDIKTMTYQ Site 4894
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. WRKYTYEEVI N YTPILRKDSK Site 4895
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos HKTHQAPASA S SLPGTGAQLP Site 3912
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - RANGTEQADG  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- R LPNGNALPPL Site 4893
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD FPNLAISSSN Q SSSSNSNANV Site 4813
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot QLPRPNSSTE A LKEKENLLIG Site 4894
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str PSTILLVDGE H TVEEWRAMLF Site 4894
Debaryomyces.hansenii.IME2 IGKQAGNSIS Q GRDSFDFENK Site 4795
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --RLPNGRSL P PLFNWLPGEL Site 4895
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin VNRRILAAAA A AAAAVQVNGT Site 4895
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de GGPAPKAHPG P PHVHDFHVDR Site 4894
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos QGLGSKLPPV V GIASKLKANL Site 3979
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- I RVPDRELYGS Site 3623
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -EPVAAPLED D FFDFDRRKEE Site 4894
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - -----RFSQH  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SAGGAASIAA S GSTSVSSTGS Site 4534
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. AAKNVPRQNS A PLLQTALLGN Site 4749
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d APGINAGMGT I PGVQNYRVDE Site 3562
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NNFVQNNQTN Q NNQTNQNNQT Site 4894
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d TSSFHTRQKS E GGVYHDPHSD Site 4430
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa YYTDLNNPNF N LSRIQSSSEL Site 4891
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- L MPTFPHHRNK Site 4894
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac QHPSSSSSVN D VSSMSTDPTL Site 4894
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ALEHEKLSVD E WKQHIYKEIS Site 4894
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri DQQQGKRPPL C INPHSAAFKT Site 4895
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SLPPSSSA-N D ISSMSTDQTL Site 4894
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 KPLLPSPLVQ P INLEHTNGTS Site 4819
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen EPFDQSFESR E LDIEEWKRQT Site 4894
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar TRPPVKDSSR D VTAAFHSRRK Site 4544
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --SDSNLSLI D SLPLLHFEES Site 4895
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D QKVCEHTEKK A DESLSKDQQK Site 4660
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U TTSHHMYKAK L LSSVASASHS Site 4739
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d KHLTGLQYLP Q LTSSRILPAL Site 4894
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GPASPLTTSY N PSSQALTEAQ Site 4894
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro DAKMGSLPQS M AGGRLPSSSN Site 4894
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d NCSIEALKEQ Q NLNLGIKRKR Site 4898
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d GGPAPKAHPG P PHIHDFHVDR Site 4894
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi GLNSPNSILK A AKTLYEHYSG Site 4894
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen HARIQAAASP P ANATAASDTN Site 4894
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable CIKEQQFEQV V ALLLQSIRLC Site 4789
Aspergillus.fumigatus.IME2 KYSLDSAALG N VPVQITSTGD Site 4757
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan HAQGPPLKKV R VVPPTATSSG Site 4864
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha QSYDDSLERE K LSIEEWKKHI Site 4890
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S RPALYGVALC I NPQSAAYKNF Site 4895
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma EEEQKHAPTS T VSKQRKNVIS Site 4634
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina PVAEEPFTFA M ELDDLPKERL Site 4894
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d PESVSIFSLK E IQLQKDPGFR Site 4894
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - --LMPTFPHH  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de RKHLPPGYLP Q LASSTVFPAV Site 4894
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EPYDHSVDER E HTVEQWKELI Site 4896
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ------SNDF  
Candida.glabrata.IME2 HQCNRINEEI Q NELSKPITFE Site 3627
Homo.sapiens.MAK..Serine.threonine.protein.kinase. NKSLPAVTSL K SDSELSTAPT Site 4719
Schizosaccharomyces.pombe.IME2 TPLNLKLRNF I ISSSEDSTSP Site 4734
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -EPVSEKIPE D FFDFDKRKDE Site 4895
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom KVASTSHRVP D SGPEPILAFY Site 4776
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d QLHDTASIFS L KEIQLQKDPG Site 4893
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d SRRRQQNQLL P LIPGSHISPT Site 4895
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ELSIRPDLNQ K LIPSHARDAL Site 4895
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SKRNKHQKVN A ANSNHRLEQL Site 4865
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------R L PSGRALPQLE Site 4894
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. SDDTLCRFES V LDLKPSEPVG Site 4697
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HHHHHHHHHH H HGQQALGNRT Site 3863
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ATQPTGPLPQ P ACPPPAPAAG Site 4468
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. DPYDQSFESR D LLIDEWKSLT Site 4894
Lachancea.thermotolerans.SKY1 ---------- V ALSERKLYQS Site 3623
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ALEEASQQLA E RERGQGFDFD Site 4719
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. QKYDDSFDDV D RTLEEWKRVT Site 4890
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U QPIVIPDTPS P PVSVITIRSD Site 4609
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. MSGISSVPTP S PLGPLAGSPV Site 3980
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. QLPDEESLFA V SGVKLKPEMC Site 4894
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD FPIAEYRNRL Y NDIIKKKKEE Site 4894
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HHHHHHHHHH H HGQQALGNRT Site 3863
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen HARIQAAAST P TNATAASDAN Site 4894
Drosophila.melanogaster.GSK3H..Putative.glycogen.s NTAGEESPRK T EDSQKPATAA Site 4530
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -NSEMPDFPN Y KSRQNQTDRK Site 4895
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 EDDFAISREI Q DNVHLYSLSR Site 3993
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -EPIAEAPFK F DMELDDLPKE Site 4894
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. QLPDEESLFT V SGVRLKPEMC Site 4894
Cryptococcus.neoformans.IME2 ERARAVMQKR N QLIESRSQLK Site 4716
Homo.sapiens.HIPK4..Homeodomain.interacting.protei KAAITGHHVP D SGPEPILAFY Site 4775
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 HHAHVHPRIS G LGQEIQLNSS Site 4846
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom IIPDTPSPPV S VITIRSDTDE Site 4617
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A NHQNQQQNQQ Q QANQQNQQSQ Site 4827
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep RGGKHSRQRM Q PPHEFTVDRP Site 4894
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RRRTQGLQYL P QLASSNMSPA Site 4895
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. YVMELPKLKL S GVVRLSSYSS Site 4813
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca IASMTPSTQP N IANISAGSPV Site 3980
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a AQPTSTPTGP V SQSTGPLQPA Site 4443
Mus.musculus.ICK..Serine.threonine.protein.kinase. TLCRFESVLD L KPSESVGTGT Site 4700
Saccharomyces.castelli.IME2 NMTRELQRET H IKIPNELDQN Site 3978
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep PRPNCPVEAL K EPANPTVATK Site 4895
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. TDMSSIFTVP N VRLQPEAGES Site 4894
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly PDGKPLPPLF D FTEDELRACT Site 4893
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- L LDGESTDEDD Site 4894
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli LPRPNSSTEA L KEKENLLIGI Site 4895
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho SMFEYLAPPR R KGSQITQQST Site 4895
Homo.sapiens.HIPK2..Homeodomain.interacting.protei EEEQKHAPTS T VSKQRKNVIS Site 4632
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 KTQRNVSMLD E FPIYQDLDDG Site 4827
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQMNA E PNAKRVRLSG Site 4873
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G STATSQDHAH S STSGNHYSGG Site 4893
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ---------R  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de PDTTSIFALK E IQLQKEASLR Site 4894
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d PESVSIFSLK E IQLQKDPGFR Site 4894
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA QAYDDSLEHE K LSIEEWKKHI Site 4890
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NNNNNNNNNS Site 4860
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF HGGSDASSII S AGGISLGGVS Site 4773
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TALIPPHVSQ N SSSSTAPHDT Site 4894
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - --RLSFKEVR  
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de PQKNSEFSET N AMNQTSNHSH Site 4509
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei MSGISTVPTP S ALGSLAGSPV Site 3980
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SLDCDTCQSA L NVCSLSSPDS Site 4614
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d RPPEGGLGYS Q LGDDDLKETG Site 4892
Candida.dubliniensis.IME2 GICNTTGSVP V FQDSDDGYEN Site 4832
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ATPSQSSSIN D ISSMSTEHTL Site 4894
Aspergillus.niger.IME2 LGNVPVQITS P IESTKRQSMP Site 4754
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge EPYDQSFESR E LDIEEWKRLT Site 4894
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d GGSVTMPPIN L TNSNLMAANL Site 3541
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. TDMSSIFTVP N VRLQPEAGES Site 4894
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein MSGISSVPTP S PLGPLAGSPV Site 3980
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QQQYQQSQRA Q LEKQQQLQQQ Site 3886
Schizosaccharomyces.japonicus.IME2 TPLNVKLSGL V LVSPTPSTAS Site 4771
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - MDVEQNVDSW  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P PELFNFTRHV P PHQRSVLAAR Site 4893
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ------RLPS G RPLPTLEMDG Site 4894
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. QKYDDSFDDV D RTLDEWKRVT Site 4890
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 EQDSKRDTSD V IGPPLSRDLG Site 4794
Debaryomyces.hansenii.SKY1 ---------- - --------VV  
Saccharomyces.cerevisiae.IME2 SNIRQLTNDI E IINKDEADNM Site 4810
Schizosaccharomyces.japonicus.b.IME2 GTISTNTTNT T NTSFNQSKPG Site 4736
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - -------SVD  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ALEEASQQLA G KEREKNQGFD Site 4718
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST QNLRIFDFDV E TELGHVPLVE Site 4894
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk EPYDDSFDNV N LPLEEWKRLT Site 4894
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de EDPHAGGCMI M PPINLTSSNL Site 3535
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act REHSVEEWKE L IYKEVLEWEE Site 4894
Candida.albicans.IME2 GTCNTTGSVP V FQDSDDGYEN Site 4832
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. DPYDQSFESR D LLIDEWKSLT Site 4894
Kluyveromyces.lactis.IME2 LYQDTTNQMN P PTLDVDDDDD Site 3969
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PVQPTSPPPG P VAQPTGPQPQ Site 4436
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SLPPSSAV-N D ISSMSTDQTL Site 4894
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. EPYDESVEAK E RTLEEWKELT Site 4890
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. EPYDESVEAK E RTLEEWKELT Site 4890
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - --------KR  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME AQASSPKPPS G GSQFKQLGRD Site 4812
Neurospora.crassa.IME2 PPPAPVPKDT L ESLEKTLRDP Site 4741
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - LMPTFPHHRN  
Ashbya.gossypii.IME2 TTTTTITNHN G QHDDNDNDKS Site 3955
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi GLNSPNSILK T AKTLYERYNC Site 4894
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos QGLGSKLPPV V GIANKLKANL Site 3979
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p KINQITTDLK L LEFDENVELG Site 4894
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace GSVKPPSHLR L VKRNQESAGV Site 4739
Schizosaccharomyces.pombe.b.IME2 GELHESVFFS E NEQIDYLLTS Site 4797
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a EPIAEAPFKF D MELDDLPKEK Site 4895
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom RECKGSLDCE A CQSTLNIDRM Site 4606
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - --------NG  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas GAPVNVSSSD L TGRQDTSRMS Site 4894
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac KIPDKQLDER E HTIEEWKELI Site 4885
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable CIKESQFEQV V VLLLRSIQLC Site 4774
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 KTLPQTPDSA S SYDQMPPPPL Site 3957
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ANALGGLGVN R RILAAAAAAA Site 4894
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly IAPQLNHKLV P SHMRPVLASK Site 4893
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ELSIRPDLNQ K LIPSHARDAL Site 4895
Species Residue at Site 2500
in 'muscle'
msaprobs

The residue for every species at site 2500 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro TQLEQQQKQA Q LQQQLQQQQM Site 3901
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QKGNRVPLCI N PQSAAFKSFI Site 4895
Scheffersomyces.stipitis.SKY1 ---------- - --------VV  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:12, November 29th 2020
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