cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2493 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2493 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2493 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2493 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 LPQIRPSTPL N LKLRNYMLST Site 4718
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -------EPV C MTPFSFDFEQ Site 4888
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 SPRTDHTNNL E IDEAMNPLNP Site 4887
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ KEIMHSTDRS G ERTMERPRTS Site 3250
Chlamydomonas.reinhardtii.LF4 MASVDGDEAS L PPIANLSLGK Site 4683
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LFNFNLAELS I RPNLNKAILP Site 4887
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 KVQQQQLQQA Q AQQQANRYQL Site 3245
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PGNQDSSHTQ G PPLKKVRVVP Site 4857
Schizosaccharomyces.octosporus.b.IME2 NSNESPAKIK Q PETISCELVE Site 4748
Candida.albicans.MAPK3..Extracellular.signal.regul --------EP I SDKIPEDFFD Site 4888
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 MLGEGGVDTL K DSKQNVVSNS Site 3319
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos QGCHHSSRKA D EITKETTEKT Site 3930
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QDQHQPIIIP D TPSPPVSVIT Site 4610
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar RPAKLTRKHV P GFQYLPQLSS Site 4887
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --EPVAEVPF R INMENDDISR Site 4890
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca SHNNVLLQST S LDNADAPMDH Site 3319
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 KYNSNGRQPS V ENTNMLQSLT Site 3241
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. VKNISTVSNI A TTTTDEQFRQ Site 3287
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -------QLE D TASIFSLKEI Site 4886
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. IGTQQFSLVQ N NFHWYTTVLI Site 4885
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET AAVNSSESLP P SSSI-NDISS Site 4888
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 KIKDYKLFKI K GSKIDGEKAE Site 3562
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U AAVNSSESPP P SSSI-NDISS Site 4888
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --ETEAQQPF D DSLEHEKLTV Site 4883
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo HQFILEQQKG N RVPLCINPQS Site 4888
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar QTNLKDSSSN L HYIKNADIVI Site 3548
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. AAVTDGSQAH T SSSS-GDASS Site 4888
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GPPPPPPPPP L VEGDLSSAPQ Site 3887
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ARRQGPTSLM E LPKLRLSGMT Site 4805
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -KLPSGNPLP  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - -KLPNNKDLP  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 NISNQPTSSS A RDSMIPSSSL Site 3265
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PQSSQHPQHV K QPTITIHDTP Site 4482
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl HQFILEQQKG N RVPLCINPQS Site 4888
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 SRKHHCFTET S KLQYLPQLTG Site 4887
Homo.sapiens.HIPK3..Homeodomain.interacting.protei HSLRECKGSL D CEACQSTLNI Site 4603
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O VKRGTSPRPP E GGLGYSQLGD Site 4885
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d MYVRRERHRP H GQENNLVVGQ Site 4345
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O VKRGTSPRPP E GGLGYSQLGD Site 4885
Naegleria.gruberi.LF4 VVLPTIYGTK Q KPTNKKPVQN Site 4754
Saccharomyces.bayanus.IME2 EVLDHSLSNI R QLTNDIEIIN Site 4803
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki RQVLAQVQQQ L LQKQQQQQQQ Site 4887
Dictyostelium.discoideum.DYRK1..Probable.serine.th SPTTQQSNHK L VDQMKKASMK Site 3902
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos WAGGDVPHKT H QAPISASTLP Site 3905
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ESTGAITSIS K LPPPSSSASK Site 3972
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d LPPEMTVARP S VKESSREGAS Site 4503
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a PEHVEVRRQS S DPLFQLPPPG Site 4745
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific RILNELVALQ S PNSIARAASN Site 4887
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos EHTADTIQLP H LTEASGKSET Site 3972
Aspergillus.nidulans.IME2 QNVRYSMDSA A LGNVPVSITT Site 4746
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se MYQFVMDRPA L YGVALCINPQ Site 4888
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SNHFKGENRN L HASVSLKSDP Site 4711
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. AAVNSSESLP P SSSV-NDISS Site 4888
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ----RLPNGR F LPPLFNFKSH Site 4886
Penicillium.marneffei.IME2 KYGLSSAANP P PQITSIPNQS Site 4748
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - -----EPEAD  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a LEQSHSSMER A FEADYGRSCD Site 4755
Drosophila.melanogaster.MAK EVAPAPMRLS G RSRAAAAVQD Site 4708
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GPPPPPPPPP L VEGDLSSAPQ Site 3889
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ---------L  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin AAVNSSESLP P SSSV-NDISS Site 4888
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a VSSNATPSQS S SINDISSMST Site 4890
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -----SPFLN Q PIHYPERRIS Site 4887
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen NAILIPPHLR S PAGTTTLTPS Site 4887
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. IYDAQLEERE H AIEEWKELIY Site 4888
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki PVSSANMMSG I SSVPTPSPLG Site 3973
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a LEQSHSSMER A FEADYGRSCD Site 4755
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -----KLPDT T SIFALKEVQL Site 4887
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. PVSSANMMSG I SSVPTPSPLG Site 3973
Yarrowia.lipolytica.SSN3..Serine.threonine.protein NVFERQEYKY P PRRISCEDSD Site 4887
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. EKLSVEEWRK Y TYEEVINYTP Site 4888
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos WAGGDVPHKT H QAPASASSLP Site 3905
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - -------RAN  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ------RLPN  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD IELPSPLFPN L AISSSNQSSS Site 4806
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -----GPQLP R PNSSTEALKE Site 4887
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -----AGPST I LLVDGEHTVE Site 4887
Debaryomyces.hansenii.IME2 KEFMKEYIGK Q AGNSISQGRD Site 3998
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------R L PNGRSLPPLF Site 4888
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SSIGGLGVNR R ILAAAAAAAA Site 4888
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de LPIPQRPGGP A PKAHPGPPHV Site 4887
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos VNPTNAFQGL G SKLPPVVGIA Site 3972
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ------IRVP  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --------EP V AAPLEDDFFD Site 4887
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GPGGNRPSAG G AASIAASGST Site 4527
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. AEHESPRAAK N VPRQNSAPLL Site 4742
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d THNLSAVAPG I NAGMGTIPGV Site 3555
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KKQNNNFNNF V QNNQTNQNNQ Site 4887
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d KETSREGTSS F HTRQKSEGGV Site 4423
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PEDPQAPYYT D LNNPNFNLSR Site 4884
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ------LMPT  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac AAVINGSQHP S SSSSVNDVSS Site 4887
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. AQQPFDDALE H EKLSVDEWKQ Site 4887
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LVHRFITDQQ Q GKRPPLCINP Site 4888
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha AAVNSSESLP P SSSA-NDISS Site 4888
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 LPTLPIEKPL L PSPLVQPINL Site 4812
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---EPEAEPF D QSFESRELDI Site 4887
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar IPSETNLTRP P VKDSSRDVTA Site 4537
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------S D SNLSLIDSLP Site 4888
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KTIKVIEQKV C EHTEKKADES Site 4653
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U CERKQPDTTS H HMYKAKLLSS Site 4732
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d KTLRQSRKHL T GLQYLPQLTS Site 4887
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PHLRSPAGPA S PLTTSYNPSS Site 4887
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro VTHEDNGDAK M GSLPQSMAGG Site 4887
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d GNLLPRPNCS I EALKEQQNLN Site 4891
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d LPIPQRLGGP A PKAHPGPPHI Site 4887
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi YVLGQLVGLN S PNSILKAAKT Site 4887
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ATILIPPHAR I QAAASPPANA Site 4887
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable WLLSLLGCIK E QQFEQVVALL Site 4782
Aspergillus.fumigatus.IME2 DRALQNVKYS L DSAALGNVPV Site 4750
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan TGNPDNSHAQ G PPLKKVRVVP Site 4857
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --ETEAQQSY D DSLEREKLSI Site 4883
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S MYQFVMDRPA L YGVALCINPQ Site 4888
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ISSDTDEEEE Q KHAPTSTVSK Site 4627
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ------EPVA E EPFTFAMELD Site 4887
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -----ALPES V SIFSLKEIQL Site 4887
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ---------L  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de KKRTRQPRKH L PPGYLPQLAS Site 4887
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ------PEPY D HSVDEREHTV Site 4889
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 FMKSGQLHQC N RINEEIQNEL Site 3620
Homo.sapiens.MAK..Serine.threonine.protein.kinase. SNHSTGENKS L PAVTSLKSDS Site 4712
Schizosaccharomyces.pombe.IME2 LPQIRPSTPL N LKLRNFIISS Site 4727
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --------EP V SEKIPEDFFD Site 4888
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom SDMLVPLKVA S TSHRVPDSGP Site 4769
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -------QLH D TASIFSLKEI Site 4886
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d KARSEGRSRR R QQNQLLPLIP Site 4888
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LFNFSPFELS I RPDLNQKLIP Site 4888
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD IPLTNPQSKR N KHQKVNAANS Site 3633
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - -----RLPSG  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. LKNKKRQSDD T LCRFESVLDL Site 4690
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HHGNSSHHHH H HHHHHHHHGQ Site 3856
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PSPPAGPATQ P TGPLPQPACP Site 4461
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---EPVADPY D QSFESRDLLI Site 4887
Lachancea.thermotolerans.SKY1 ---------- - ------VALS  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GLVKAQIALE E ASQQLAERER Site 4712
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---EPKAQKY D DSFDDVDRTL Site 4883
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U LPLQEQRQPI V IPDTPSPPVS Site 4602
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. PVSSASMMSG I SSVPTPSPLG Site 3973
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -------QLP D EESLFAVSGV Site 4887
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -----QKFPI A EYRNRLYNDI Site 4887
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HHGNSSHHHH H HHHHHHHHGQ Site 3856
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ATILIPPHAR I QAAASTPTNA Site 4887
Drosophila.melanogaster.GSK3H..Putative.glycogen.s SAAHRNRNTA G EESPRKTEDS Site 4523
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --------NS E MPDFPNYKSR Site 4888
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ESTLSGAEDD F AISREIQDNV Site 3986
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --------EP I AEAPFKFDME Site 4887
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -------QLP D EESLFTVSGV Site 4887
Cryptococcus.neoformans.IME2 AAALKQKERA R AVMQKRNQLI Site 4709
Homo.sapiens.HIPK4..Homeodomain.interacting.protei SDMMVPLKAA I TGHHVPDSGP Site 4768
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 SEPGVSSHHA H VHPRISGLGQ Site 4839
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QDQHQPIIIP D TPSPPVSVIT Site 4610
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QNQQQQANHQ N QQQNQQQQAN Site 4820
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep SELPIPQRGG K HSRQRMQPPH Site 4887
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RRHEKAPRRR T QGLQYLPQLA Site 4888
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. PKRRGPAYVM E LPKLKLSGVV Site 4806
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca SSSLMAGIAS M TPSTQPNIAN Site 3973
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PAPAPSSAQP T STPTGPVSQS Site 4436
Mus.musculus.ICK..Serine.threonine.protein.kinase. KKRQSDDTLC R FESVLDLKPS Site 4693
Saccharomyces.castelli.IME2 STEEDEINMT R ELQRETHIKI Site 3971
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---GCQLPRP N CPVEALKEPA Site 4888
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -----ELTDM S SIFTVPNVRL Site 4887
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -----RTPDG K PLPPLFDFTE Site 4886
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ------LLDG  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ----GPQLPR P NSSTEALKEK Site 4888
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho MLSTHLTSMF E YLAPPRRKGS Site 4888
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ISSDTDEEEE Q KHAPTSTVSK Site 4625
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 RKLMAPAKTQ R NVSMLDEFPI Site 4820
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQMNAEPNA Site 4866
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ATPSSTSSTA T SQDHAHSSTS Site 4886
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -----KLPDT T SIFALKEIQL Site 4887
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -----ALPES V SIFSLKEIQL Site 4887
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --ETEAQQAY D DSLEHEKLSI Site 4883
Candida.albicans.SSN3..Serine.threonine.protein.ki NNNNNNNNNN N NNNNNNNNNN Site 4853
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF HAGASSYHGG S DASSIISAGG Site 4766
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ASKPSLRTAL I PPHVSQNSSS Site 4887
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ---------R  
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de KPLTSDLPQK N SEFSETNAMN Site 4502
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei PVSSASMMSG I STVPTPSALG Site 3973
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SLRECKRSLD C DTCQSALNVC Site 4607
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d VKRGTSPRPP E GGLGYSQLGD Site 4885
Candida.dubliniensis.IME2 KLQKNSTGIC N TTGSVPVFQD Site 4825
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DAAVSSKATP S QSSSINDISS Site 4887
Aspergillus.niger.IME2 YSLDSAALGN V PVQITSPIES Site 4747
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---EPIAEPY D QSFESRELDI Site 4887
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d LKENPHCGGS V TMPPINLTNS Site 3534
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -----ELTDM S SIFTVPNVRL Site 4887
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein PVSSANVMSG I SSVPTPSPLG Site 3973
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QSSSQQQQQQ Y QQSQRAQLEK Site 3879
Schizosaccharomyces.japonicus.IME2 LPELRPTTPL N VKLSGLVLVS Site 4764
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - -------MDV  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P TGQLRDLPEL F NFTRHVPPHQ Site 4886
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - --RLPSGRPL  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---EPQVQKY D DSFDDVDRTL Site 4883
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 SVEIGKPEQD S KRDTSDVIGP Site 3997
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 EVLDHSLSNI R QLTNDIEIIN Site 4803
Schizosaccharomyces.japonicus.b.IME2 KHNFGHSGTI S TNTTNTTNTS Site 4729
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a GLVKAQIALE E ASQQLAGKER Site 4711
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -DTYVKAQNL R IFDFDVETEL Site 4887
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---ETEAEPY D DSFDNVNLPL Site 4887
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ENSDGVKEDP H AGGCMIMPPI Site 3528
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act TDKQLDEREH S VEEWKELIYK Site 4887
Candida.albicans.IME2 KLQKNSNGTC N TTGSVPVFQD Site 4825
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -------DPY D QSFESRDLLI Site 4887
Kluyveromyces.lactis.IME2 ELNDKIELYQ D TTNQMNPPTL Site 3962
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina APTPTPTPVQ P TSPPPGPVAQ Site 4429
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. AAVNSSESLP P SSAV-NDISS Site 4888
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---EPEAEPY D ESVEAKERTL Site 4883
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---EPEAEPY D ESVEAKERTL Site 4883
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SELGARKAQA S SPKPPSGGSQ Site 4805
Neurospora.crassa.IME2 SSMVIDSPPP A PVPKDTLESL Site 4734
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - -------LMP  
Ashbya.gossypii.IME2 TTTPTPATTT T TITNHNGQHD Site 3948
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi YVLGQLVGLN S PNSILKTAKT Site 4887
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos VNPASAFQGL G SKLPPVVGIA Site 3972
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -------KIN Q ITTDLKLLEF Site 4887
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace TRSSEADGSV K PPSHLRLVKR Site 4732
Schizosaccharomyces.pombe.b.IME2 PAISLKPGEL H ESVFFSENEQ Site 4790
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -------EPI A EAPFKFDMEL Site 4888
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TSPRPSLREC K GSLDCEACQS Site 4599
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas VSMRLHRGAP V NVSSSDLTGR Site 3319
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ------PKIP D KQLDEREHTI Site 4878
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable WLLSLLGCIK E SQFEQVVVLL Site 4767
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TEARVTVKTL P QTPDSASSYD Site 3950
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GITAGAAANA L GGLGVNRRIL Site 4887
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly FTRHELSIAP Q LNHKLVPSHM Site 4886
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LFNFSPFELS I RPDLNQKLIP Site 4888
Species Residue at Site 2493
in 'muscle'
msaprobs

The residue for every species at site 2493 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QYQQTQRTQL E QQQKQAQLQQ Site 3894
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo HQFILEQQKG N RVPLCINPQS Site 4888
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 07:01, July 7th 2020
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