cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2491 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2491 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2491 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2491 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 PILPQIRPST P LNLKLRNYML Site 4716
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------E P VCMTPFSFDF Site 4886
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 CQSPRTDHTN N LEIDEAMNPL Site 4885
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ SLKEIMHSTD R SGERTMERPR Site 3248
Chlamydomonas.reinhardtii.LF4 SSMASVDGDE A SLPPIANLSL Site 4681
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g PPLFNFNLAE L SIRPNLNKAI Site 4885
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 QAKVQQQQLQ Q AQAQQQANRY Site 3243
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho GHPGNQDSSH T QGPPLKKVRV Site 4855
Schizosaccharomyces.octosporus.b.IME2 TMNSNESPAK I KQPETISCEL Site 4746
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- E PISDKIPEDF Site 4886
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 RRMLGEGGVD T LKDSKQNVVS Site 3317
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos KVQGCHHSSR K ADEITKETTE Site 3928
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PVQDQHQPII I PDTPSPPVSV Site 4608
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ARRPAKLTRK H VPGFQYLPQL Site 4885
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ----EPVAEV P FRINMENDDI Site 4888
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca SASHNNVLLQ S TSLDNADAPM Site 3317
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 MMKYNSNGRQ P SVENTNMLQS Site 3239
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. SNVKNISTVS N IATTTTDEQF Site 3285
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------Q L EDTASIFSLK Site 4884
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. VLIGTQQFSL V QNNFHWYTTV Site 4883
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SGAAVNSSES L PPSSSI-NDI Site 4886
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 DPKIKDYKLF K IKGSKIDGEK Site 3560
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SGAAVNSSES P PPSSSI-NDI Site 4886
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ----ETEAQQ P FDDSLEHEKL Site 4881
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo IIHQFILEQQ K GNRVPLCINP Site 4886
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar CSQTNLKDSS S NLHYIKNADI Site 3546
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. LGAAVTDGSQ A HTSSSS-GDA Site 4886
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PPGPPPPPPP P PLVEGDLSSA Site 3885
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. GHARRQGPTS L MELPKLRLSG Site 4803
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ---KLPSGNP  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ---KLPNNKD  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 SGNISNQPTS S SARDSMIPSS Site 3263
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PHPQSSQHPQ H VKQPTITIHD Site 4480
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl IIHQFILEQQ K GNRVPLCINP Site 4886
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 RKSRKHHCFT E TSKLQYLPQL Site 4885
Homo.sapiens.HIPK3..Homeodomain.interacting.protei QRHSLRECKG S LDCEACQSTL Site 4601
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O QRVKRGTSPR P PEGGLGYSQL Site 4883
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d HSMYVRRERH R PHGQENNLVV Site 4343
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O QRVKRGTSPR P PEGGLGYSQL Site 4883
Naegleria.gruberi.LF4 NMVVLPTIYG T KQKPTNKKPV Site 4752
Saccharomyces.bayanus.IME2 DEEVLDHSLS N IRQLTNDIEI Site 4801
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQRQVLAQVQ Q QLLQKQQQQQ Site 4885
Dictyostelium.discoideum.DYRK1..Probable.serine.th TYSPTTQQSN H KLVDQMKKAS Site 3900
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos RPWAGGDVPH K THQAPISAST Site 3903
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --ESTGAITS I SKLPPPSSSA Site 3970
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d EQLPPEMTVA R PSVKESSREG Site 4501
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a HDPEHVEVRR Q SSDPLFQLPP Site 4743
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific FKRILNELVA L QSPNSIARAA Site 4885
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos SVEHTADTIQ L PHLTEASGKS Site 3970
Aspergillus.nidulans.IME2 AVQNVRYSMD S AALGNVPVSI Site 4744
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se EKMYQFVMDR P ALYGVALCIN Site 4886
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. PVSNHFKGEN R NLHASVSLKS Site 4709
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SGAAVNSSES L PPSSSV-NDI Site 4886
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ------RLPN G RFLPPLFNFK Site 4884
Penicillium.marneffei.IME2 NVKYGLSSAA N PPPQITSIPN Site 4746
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - -------EPE  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a RFLEQSHSSM E RAFEADYGRS Site 4753
Drosophila.melanogaster.MAK QPEVAPAPMR L SGRSRAAAAV Site 4706
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PPGPPPPPPP P PLVEGDLSSA Site 3887
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SGAAVNSSES L PPSSSV-NDI Site 4886
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a AAVSSNATPS Q SSSINDISSM Site 4888
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -------SPF L NQPIHYPERR Site 4885
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen SLNAILIPPH L RSPAGTTTLT Site 4885
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. PQIYDAQLEE R EHAIEEWKEL Site 4886
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki STPVSSANMM S GISSVPTPSP Site 3971
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a RFLEQSHSSM E RAFEADYGRS Site 4753
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -------KLP D TTSIFALKEV Site 4885
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. STPVSSANMM S GISSVPTPSP Site 3971
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --NVFERQEY K YPPRRISCED Site 4885
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. EGEKLSVEEW R KYTYEEVINY Site 4886
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos RPWAGGDVPH K THQAPASASS Site 3903
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ---------R  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - --------RL  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NQIELPSPLF P NLAISSSNQS Site 4804
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -------GPQ L PRPNSSTEAL Site 4885
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -------AGP S TILLVDGEHT Site 4885
Debaryomyces.hansenii.IME2 YEKEFMKEYI G KQAGNSISQG Site 3996
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - RLPNGRSLPP  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin TNSSIGGLGV N RRILAAAAAA Site 4886
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -ELPIPQRPG G PAPKAHPGPP Site 4885
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos RVVNPTNAFQ G LGSKLPPVVG Site 3970
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - --------IR  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- E PVAAPLEDDF Site 4885
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ASGPGGNRPS A GGAASIAASG Site 4525
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. DPAEHESPRA A KNVPRQNSAP Site 4740
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d PLTHNLSAVA P GINAGMGTIP Site 3553
Dictyostelium.discoideum.CDK10..Probable.cyclin.de QNKKQNNNFN N FVQNNQTNQN Site 4885
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d SVKETSREGT S SFHTRQKSEG Site 4421
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa YHPEDPQAPY Y TDLNNPNFNL Site 4882
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - --------LM  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac LGAAVINGSQ H PSSSSSVNDV Site 4885
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. TEAQQPFDDA L EHEKLSVDEW Site 4885
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri KELVHRFITD Q QQGKRPPLCI Site 4886
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SGAAVNSSES L PPSSSA-NDI Site 4886
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 AQLPTLPIEK P LLPSPLVQPI Site 4810
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -----EPEAE P FDQSFESREL Site 4885
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar DQIPSETNLT R PPVKDSSRDV Site 4535
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - SDSNLSLIDS  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ESKTIKVIEQ K VCEHTEKKAD Site 4651
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U LECERKQPDT T SHHMYKAKLL Site 4730
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ARKTLRQSRK H LTGLQYLPQL Site 4885
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen IPPHLRSPAG P ASPLTTSYNP Site 4885
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro RRVTHEDNGD A KMGSLPQSMA Site 4885
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --GNLLPRPN C SIEALKEQQN Site 4889
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -ELPIPQRLG G PAPKAHPGPP Site 4885
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi MKYVLGQLVG L NSPNSILKAA Site 4885
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PLATILIPPH A RIQAAASPPA Site 4885
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable VFWLLSLLGC I KEQQFEQVVA Site 4780
Aspergillus.fumigatus.IME2 DLDRALQNVK Y SLDSAALGNV Site 4748
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan GHTGNPDNSH A QGPPLKKVRV Site 4855
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ----ETEAQQ S YDDSLEREKL Site 4881
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S EKMYQFVMDR P ALYGVALCIN Site 4886
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ITISSDTDEE E EQKHAPTSTV Site 4625
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --------EP V AEEPFTFAME Site 4885
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -------ALP E SVSIFSLKEI Site 4885
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de DRKKRTRQPR K HLPPGYLPQL Site 4885
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --------PE P YDHSVDEREH Site 4887
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 TDFMKSGQLH Q CNRINEEIQN Site 3618
Homo.sapiens.MAK..Serine.threonine.protein.kinase. SGSNHSTGEN K SLPAVTSLKS Site 4710
Schizosaccharomyces.pombe.IME2 PVLPQIRPST P LNLKLRNFII Site 4725
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- E PVSEKIPEDF Site 4886
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom MVSDMLVPLK V ASTSHRVPDS Site 4767
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------Q L HDTASIFSLK Site 4884
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d KRKARSEGRS R RRQQNQLLPL Site 4886
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH PELFNFSPFE L SIRPDLNQKL Site 4886
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SKIPLTNPQS K RNKHQKVNAA Site 3631
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - -------RLP  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. IDLKNKKRQS D DTLCRFESVL Site 4688
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos HHHHGNSSHH H HHHHHHHHHH Site 3854
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act RPPSPPAGPA T QPTGPLPQPA Site 4459
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -----EPVAD P YDQSFESRDL Site 4885
Lachancea.thermotolerans.SKY1 ---------- - --------VA  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a RNGLVKAQIA L EEASQQLAER Site 4710
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -----EPKAQ K YDDSFDDVDR Site 4881
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PLLPLQEQRQ P IVIPDTPSPP Site 4600
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. STPVSSASMM S GISSVPTPSP Site 3971
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------Q L PDEESLFAVS Site 4885
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -------QKF P IAEYRNRLYN Site 4885
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos HHHHGNSSHH H HHHHHHHHHH Site 3854
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen PLATILIPPH A RIQAAASTPT Site 4885
Drosophila.melanogaster.GSK3H..Putative.glycogen.s EPSAAHRNRN T AGEESPRKTE Site 4521
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- N SEMPDFPNYK Site 4886
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 DSESTLSGAE D DFAISREIQD Site 3984
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- E PIAEAPFKFD Site 4885
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------Q L PDEESLFTVS Site 4885
Cryptococcus.neoformans.IME2 REAAALKQKE R ARAVMQKRNQ Site 4707
Homo.sapiens.HIPK4..Homeodomain.interacting.protei AVSDMMVPLK A AITGHHVPDS Site 4766
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 DCSEPGVSSH H AHVHPRISGL Site 4837
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PVQDQHQPII I PDTPSPPVSV Site 4608
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AQQNQQQQAN H QNQQQNQQQQ Site 4818
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -HSELPIPQR G GKHSRQRMQP Site 4885
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. SGRRHEKAPR R RTQGLQYLPQ Site 4886
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. DRPKRRGPAY V MELPKLKLSG Site 4804
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca VSSSSLMAGI A SMTPSTQPNI Site 3971
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PAPAPAPSSA Q PTSTPTGPVS Site 4434
Mus.musculus.ICK..Serine.threonine.protein.kinase. KNKKRQSDDT L CRFESVLDLK Site 4691
Saccharomyces.castelli.IME2 TDSTEEDEIN M TRELQRETHI Site 3969
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -----GCQLP R PNCPVEALKE Site 4886
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -------ELT D MSSIFTVPNV Site 4885
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -------RTP D GKPLPPLFDF Site 4884
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - --------LL  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------GPQL P RPNSSTEALK Site 4886
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho KGMLSTHLTS M FEYLAPPRRK Site 4886
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ITISSDTDEE E EQKHAPTSTV Site 4623
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 PSRKLMAPAK T QRNVSMLDEF Site 4818
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQMNAEP Site 4864
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ASATPSSTSS T ATSQDHAHSS Site 4884
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -------KLP D TTSIFALKEI Site 4885
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -------ALP E SVSIFSLKEI Site 4885
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ----ETEAQQ A YDDSLEHEKL Site 4881
Candida.albicans.SSN3..Serine.threonine.protein.ki AANNNNNNNN N NNNNNNNNNN Site 4851
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GYHAGASSYH G GSDASSIISA Site 4764
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ELASKPSLRT A LIPPHVSQNS Site 4885
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de NFKPLTSDLP Q KNSEFSETNA Site 4500
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei STPVSSASMM S GISTVPTPSA Site 3971
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TLSLRECKRS L DCDTCQSALN Site 4605
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d QRVKRGTSPR P PEGGLGYSQL Site 4883
Candida.dubliniensis.IME2 PLKLQKNSTG I CNTTGSVPVF Site 4823
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a PSDAAVSSKA T PSQSSSINDI Site 4885
Aspergillus.niger.IME2 VKYSLDSAAL G NVPVQITSPI Site 4745
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -----EPIAE P YDQSFESREL Site 4885
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d NGLKENPHCG G SVTMPPINLT Site 3532
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -------ELT D MSSIFTVPNV Site 4885
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein STPVSSANVM S GISSVPTPSP Site 3971
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QPQSSSQQQQ Q QYQQSQRAQL Site 3877
Schizosaccharomyces.japonicus.IME2 PVLPELRPTT P LNVKLSGLVL Site 4762
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ---------M  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P HGTGQLRDLP E LFNFTRHVPP Site 4884
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----RLPSGR  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -----EPQVQ K YDDSFDDVDR Site 4881
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ASSVEIGKPE Q DSKRDTSDVI Site 3995
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 DEEVLDHSLS N IRQLTNDIEI Site 4801
Schizosaccharomyces.japonicus.b.IME2 PLKHNFGHSG T ISTNTTNTTN Site 4727
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a RNGLVKAQIA L EEASQQLAGK Site 4709
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---DTYVKAQ N LRIFDFDVET Site 4885
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -----ETEAE P YDDSFDNVNL Site 4885
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de PSENSDGVKE D PHAGGCMIMP Site 3526
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act AITDKQLDER E HSVEEWKELI Site 4885
Candida.albicans.IME2 PSKLQKNSNG T CNTTGSVPVF Site 4823
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------D P YDQSFESRDL Site 4885
Kluyveromyces.lactis.IME2 SKELNDKIEL Y QDTTNQMNPP Site 3960
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina APAPTPTPTP V QPTSPPPGPV Site 4427
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SGAAVNSSES L PPSSAV-NDI Site 4886
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -----EPEAE P YDESVEAKER Site 4881
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -----EPEAE P YDESVEAKER Site 4881
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME AKSELGARKA Q ASSPKPPSGG Site 4803
Neurospora.crassa.IME2 NRSSMVIDSP P PAPVPKDTLE Site 4732
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ---------L  
Ashbya.gossypii.IME2 TTTTTPTPAT T TTTITNHNGQ Site 3946
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi MKYVLGQLVG L NSPNSILKTA Site 4885
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos RVVNPASAFQ G LGSKLPPVVG Site 3970
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------K I NQITTDLKLL Site 4885
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace GLTRSSEADG S VKPPSHLRLV Site 4730
Schizosaccharomyces.pombe.b.IME2 NVPAISLKPG E LHESVFFSEN Site 4788
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------E P IAEAPFKFDM Site 4886
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom EETSPRPSLR E CKGSLDCEAC Site 4597
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas RKVSMRLHRG A PVNVSSSDLT Site 3317
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --------PK I PDKQLDEREH Site 4876
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable VLWLLSLLGC I KESQFEQVVV Site 4765
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ESTEARVTVK T LPQTPDSASS Site 3948
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ASGITAGAAA N ALGGLGVNRR Site 4885
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly FDFTRHELSI A PQLNHKLVPS Site 4884
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk PELFNFSPFE L SIRPDLNQKL Site 4886
Species Residue at Site 2491
in 'muscle'
msaprobs

The residue for every species at site 2491 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QQQYQQTQRT Q LEQQQKQAQL Site 3892
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo IIHQFILEQQ K GNRVPLCINP Site 4886
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:56, November 28th 2020
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