cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2488 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2488 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2488 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2488 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 PFFPILPQIR P STPLNLKLRN Site 4713
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - -EPVCMTPFS  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 QIACQSPRTD H TNNLEIDEAM Site 4882
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ VSMSLKEIMH S TDRSGERTME Site 3245
Chlamydomonas.reinhardtii.LF4 AAQSSMASVD G DEASLPPIAN Site 4678
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RHLPPLFNFN L AELSIRPNLN Site 4882
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 AQAQAKVQQQ Q LQQAQAQQQA Site 3240
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho NGTGHPGNQD S SHTQGPPLKK Site 4852
Schizosaccharomyces.octosporus.b.IME2 MSETMNSNES P AKIKQPETIS Site 4743
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - --EPISDKIP  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ETSRRMLGEG G VDTLKDSKQN Site 3314
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos RKDKVQGCHH S SRKADEITKE Site 3925
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SLVPVQDQHQ P IIIPDTPSPP Site 4605
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar EKAARRPAKL T RKHVPGFQYL Site 4882
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -------EPV A EVPFRINMEN Site 4885
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca LGVSASHNNV L LQSTSLDNAD Site 3314
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 NDIMMKYNSN G RQPSVENTNM Site 3236
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. SQPSNVKNIS T VSNIATTTTD Site 3282
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -QLEDTASIF  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. YTTVLIGTQQ F SLVQNNFHWY Site 4880
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET PSPSGAAVNS S ESLPPSSSI- Site 4883
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 TNADPKIKDY K LFKIKGSKID Site 3557
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U PSPSGAAVNS S ESPPPSSSI- Site 4883
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -------ETE A QQPFDDSLEH Site 4878
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo VKEIIHQFIL E QQKGNRVPLC Site 4883
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar FKICSQTNLK D SSSNLHYIKN Site 3543
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. PAPLGAAVTD G SQAHTSSSS- Site 4883
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PPEPPGPPPP P PPPPLVEGDL Site 3882
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. HEEGHARRQG P TSLMELPKLR Site 4800
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ------KLPS  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ------KLPN  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 LDNSGNISNQ P TSSSARDSMI Site 2793
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO GQQPHPQSSQ H PQHVKQPTIT Site 4477
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl VKEIIHQFIL E QQKGNRVPLC Site 4883
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 KTLRKSRKHH C FTETSKLQYL Site 4882
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ETSQRHSLRE C KGSLDCEACQ Site 4598
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O SEQQRVKRGT S PRPPEGGLGY Site 4880
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d PHRHSMYVRR E RHRPHGQENN Site 4340
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O SEQQRVKRGT S PRPPEGGLGY Site 4880
Naegleria.gruberi.LF4 NNSNMVVLPT I YGTKQKPTNK Site 4749
Saccharomyces.bayanus.IME2 QLPDEEVLDH S LSNIRQLTND Site 4798
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki SLLQQRQVLA Q VQQQLLQKQQ Site 4882
Dictyostelium.discoideum.DYRK1..Probable.serine.th QQQTYSPTTQ Q SNHKLVDQMK Site 3897
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos QPLRPWAGGD V PHKTHQAPIS Site 3900
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -----ESTGA I TSISKLPPPS Site 3967
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d QPGEQLPPEM T VARPSVKESS Site 4498
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a SPGHDPEHVE V RRQSSDPLFQ Site 4740
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SSDFKRILNE L VALQSPNSIA Site 4882
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos QQSSVEHTAD T IQLPHLTEAS Site 3967
Aspergillus.nidulans.IME2 LDKAVQNVRY S MDSAALGNVP Site 4741
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ELREKMYQFV M DRPALYGVAL Site 4883
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SGLPVSNHFK G ENRNLHASVS Site 4706
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. PSPSGAAVNS S ESLPPSSSV- Site 4883
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------R L PNGRFLPPLF Site 4881
Penicillium.marneffei.IME2 TLQNVKYGLS S AANPPPQITS Site 4743
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a SSERFLEQSH S SMERAFEADY Site 4750
Drosophila.melanogaster.MAK PQLQPEVAPA P MRLSGRSRAA Site 4703
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PPEPPGPPPP P PPPPLVEGDL Site 3884
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin PSPSGAAVNS S ESLPPSSSV- Site 4883
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a PSDAAVSSNA T PSQSSSINDI Site 4885
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- S PFLNQPIHYP Site 4882
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen IQPSLNAILI P PHLRSPAGTT Site 4882
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---PQIYDAQ L EEREHAIEEW Site 4883
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki PGGSTPVSSA N MMSGISSVPT Site 3968
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a SSERFLEQSH S SMERAFEADY Site 4750
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- K LPDTTSIFAL Site 4882
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. PGGSTPVSSA N MMSGISSVPT Site 3968
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -----NVFER Q EYKYPPRRIS Site 4882
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. DSLEGEKLSV E EWRKYTYEEV Site 4883
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos QPLRPWAGGD V PHKTHQAPAS Site 3900
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD HAMNQIELPS P LFPNLAISSS Site 4801
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- G PQLPRPNSST Site 4882
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- A GPSTILLVDG Site 4882
Debaryomyces.hansenii.IME2 DDGYEKEFMK E YIGKQAGNSI Site 3993
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ---RLPNGRS  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin NGVTNSSIGG L GVNRRILAAA Site 4883
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ----ELPIPQ R PGGPAPKAHP Site 4882
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos PGKRVVNPTN A FQGLGSKLPP Site 3967
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - --EPVAAPLE  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg LQNASGPGGN R PSAGGAASIA Site 4522
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. PGHDPAEHES P RAAKNVPRQN Site 4737
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d AIPPLTHNLS A VAPGINAGMG Site 3550
Dictyostelium.discoideum.CDK10..Probable.cyclin.de FKNQNKKQNN N FNNFVQNNQT Site 4882
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ARSSVKETSR E GTSSFHTRQK Site 4418
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa MLAYHPEDPQ A PYYTDLNNPN Site 4879
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac PSPLGAAVIN G SQHPSSSSSV Site 4882
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --ETEAQQPF D DALEHEKLSV Site 4882
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri WQVKELVHRF I TDQQQGKRPP Site 4883
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha PSPSGAAVNS S ESLPPSSSA- Site 4883
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 NKPAQLPTLP I EKPLLPSPLV Site 4807
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --------EP E AEPFDQSFES Site 4882
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar QQSDQIPSET N LTRPPVKDSS Site 4532
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ---SDSNLSL  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TEQESKTIKV I EQKVCEHTEK Site 4648
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U EGRLECERKQ P DTTSHHMYKA Site 4727
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d DKPARKTLRQ S RKHLTGLQYL Site 4882
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen AILIPPHLRS P AGPASPLTTS Site 4882
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro YPTRRVTHED N GDAKMGSLPQ Site 4882
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -----GNLLP R PNCSIEALKE Site 4886
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ----ELPIPQ R LGGPAPKAHP Site 4882
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi TEEMKYVLGQ L VGLNSPNSIL Site 4882
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen SNPPLATILI P PHARIQAAAS Site 4882
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SCGVFWLLSL L GCIKEQQFEQ Site 4777
Aspergillus.fumigatus.IME2 DLNDLDRALQ N VKYSLDSAAL Site 4745
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan NGAGHTGNPD N SHAQGPPLKK Site 4852
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -------ETE A QQSYDDSLER Site 4878
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ELREKMYQFV M DRPALYGVAL Site 4883
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma VSVITISSDT D EEEEQKHAPT Site 4622
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - EPVAEEPFTF  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- A LPESVSIFSL Site 4882
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de RELDRKKRTR Q PRKHLPPGYL Site 4882
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - PEPYDHSVDE  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 ITKTDFMKSG Q LHQCNRINEE Site 3615
Homo.sapiens.MAK..Serine.threonine.protein.kinase. PVPSGSNHST G ENKSLPAVTS Site 4707
Schizosaccharomyces.pombe.IME2 TFFPVLPQIR P STPLNLKLRN Site 4722
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - --EPVSEKIP  
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom RADMVSDMLV P LKVASTSHRV Site 4764
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -QLHDTASIF  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---KRKARSE G RSRRRQQNQL Site 4883
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RHLPELFNFS P FELSIRPDLN Site 4883
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD TSTSKIPLTN P QSKRNKHQKV Site 3628
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. LSRIDLKNKK R QSDDTLCRFE Site 4685
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos NALHHHHGNS S HHHHHHHHHH Site 3851
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ATARPPSPPA G PATQPTGPLP Site 4456
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --------EP V ADPYDQSFES Site 4882
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a KCERNGLVKA Q IALEEASQQL Site 4707
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --------EP K AQKYDDSFDD Site 4878
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SYNPLLPLQE Q RQPIVIPDTP Site 4597
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. PGGSTPVSSA S MMSGISSVPT Site 3968
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -QLPDEESLF  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- Q KFPIAEYRNR Site 4882
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos NALHHHHGNS S HHHHHHHHHH Site 3851
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen SNPPLATILI P PHARIQAAAS Site 4882
Drosophila.melanogaster.GSK3H..Putative.glycogen.s TTKEPSAAHR N RNTAGEESPR Site 4518
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - --NSEMPDFP  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 EEQDSESTLS G AEDDFAISRE Site 3981
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - --EPIAEAPF  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -QLPDEESLF  
Cryptococcus.neoformans.IME2 KAQREAAALK Q KERARAVMQK Site 4704
Homo.sapiens.HIPK4..Homeodomain.interacting.protei CTNAVSDMMV P LKAAITGHHV Site 4763
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ASRDCSEPGV S SHHAHVHPRI Site 4834
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SLVPVQDQHQ P IIIPDTPSPP Site 4605
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A NQQAQQNQQQ Q ANHQNQQQNQ Site 4815
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ----HSELPI P QRGGKHSRQR Site 4882
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. PERSGRRHEK A PRRRTQGLQY Site 4883
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. QEEDRPKRRG P AYVMELPKLK Site 4801
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca STPVSSSSLM A GIASMTPSTQ Site 3968
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a APAPAPAPAP S SAQPTSTPTG Site 4431
Mus.musculus.ICK..Serine.threonine.protein.kinase. IDVKNKKRQS D DTLCRFESVL Site 4688
Saccharomyces.castelli.IME2 FSDTDSTEED E INMTRELQRE Site 3966
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --------GC Q LPRPNCPVEA Site 4883
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- E LTDMSSIFTV Site 4882
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- R TPDGKPLPPL Site 4881
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------G P QLPRPNSSTE Site 4883
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --LKGMLSTH L TSMFEYLAPP Site 4883
Homo.sapiens.HIPK2..Homeodomain.interacting.protei VSVITISSDT D EEEEQKHAPT Site 4620
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 PNSPSRKLMA P AKTQRNVSML Site 4815
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQQQQMN Site 4861
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G VSKASATPSS T SSTATSQDHA Site 4881
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- K LPDTTSIFAL Site 4882
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- A LPESVSIFSL Site 4882
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -------ETE A QQAYDDSLEH Site 4878
Candida.albicans.SSN3..Serine.threonine.protein.ki MTTAANNNNN N NNNNNNNNNN Site 4848
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF VHSGYHAGAS S YHGGSDASSI Site 4761
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TAGELASKPS L RTALIPPHVS Site 4882
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RQQNFKPLTS D LPQKNSEFSE Site 4497
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei SGSSTPVSSA S MMSGISTVPT Site 3968
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PAQTLSLREC K RSLDCDTCQS Site 4602
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SEQQRVKRGT S PRPPEGGLGY Site 4880
Candida.dubliniensis.IME2 LLTPLKLQKN S TGICNTTGSV Site 4820
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a KDQPSDAAVS S KATPSQSSSI Site 4882
Aspergillus.niger.IME2 LQTVKYSLDS A ALGNVPVQIT Site 4742
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --------EP I AEPYDQSFES Site 4882
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d TNCNGLKENP H CGGSVTMPPI Site 3529
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- E LTDMSSIFTV Site 4882
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein PGGSTPVSSA N VMSGISSVPT Site 3968
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty YSQQPQSSSQ Q QQQQYQQSQR Site 3874
Schizosaccharomyces.japonicus.IME2 ILFPVLPELR P TTPLNVKLSG Site 4759
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P DSRHGTGQLR D LPELFNFTRH Site 4881
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -------RLP  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --------EP Q VQKYDDSFDD Site 4878
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 SSHASSVEIG K PEQDSKRDTS Site 3992
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 QLPDEEVLDH S LSNIRQLTND Site 4798
Schizosaccharomyces.japonicus.b.IME2 LSTPLKHNFG H SGTISTNTTN Site 4724
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a KCERNGLVKA Q IALEEASQQL Site 4706
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ------DTYV K AQNLRIFDFD Site 4882
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --------ET E AEPYDDSFDN Site 4882
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de PLNPSENSDG V KEDPHAGGCM Site 3523
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --PAITDKQL D EREHSVEEWK Site 4882
Candida.albicans.IME2 LLTPSKLQKN S NGTCNTTGSV Site 4820
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - -DPYDQSFES  
Kluyveromyces.lactis.IME2 DQISKELNDK I ELYQDTTNQM Site 3957
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PAPAPAPTPT P TPVQPTSPPP Site 4424
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. PSPSGAAVNS S ESLPPSSAV- Site 4883
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --------EP E AEPYDESVEA Site 4878
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --------EP E AEPYDESVEA Site 4878
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME TWPAKSELGA R KAQASSPKPP Site 4800
Neurospora.crassa.IME2 WGSNRSSMVI D SPPPAPVPKD Site 4729
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 TTTTTTTTPT P ATTTTTITNH Site 3943
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi TDEMKYVLGQ L VGLNSPNSIL Site 4882
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos SGKRVVNPAS A FQGLGSKLPP Site 3967
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - -KINQITTDL  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace VDGGLTRSSE A DGSVKPPSHL Site 4727
Schizosaccharomyces.pombe.b.IME2 ASSNVPAISL K PGELHESVFF Site 4785
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - -EPIAEAPFK  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom SDDEETSPRP S LRECKGSLDC Site 4594
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ERERKVSMRL H RGAPVNVSSS Site 3314
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - PKIPDKQLDE  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable GCAVLWLLSL L GCIKESQFEQ Site 4762
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 ALMESTEARV T VKTLPQTPDS Site 3945
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil NTQASGITAG A AANALGGLGV Site 4882
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly PPLFDFTRHE L SIAPQLNHKL Site 4881
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RHLPELFNFS P FELSIRPDLN Site 4883
Species Residue at Site 2488
in 'muscle'
msaprobs

The residue for every species at site 2488 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QQQQQQYQQT Q RTQLEQQQKQ Site 3889
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo VKEIIHQFIL E QQKGNRVPLC Site 4883
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:28, November 28th 2020
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