cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2479 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2479 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2479 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2479 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 STPMYRPPSP F FPILPQIRPS Site 4704
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 PYDIEVDESQ I ACQSPRTDHT Site 4873
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ SYAQRPRETV S MSLKEIMHST Site 3133
Chlamydomonas.reinhardtii.LF4 GGYGRLPGLA A QSSMASVDGD Site 4669
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g CSRDEGTIER H LPPLFNFNLA Site 4873
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 QQQAQAQAQA Q AQAKVQQQQL Site 3231
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho QQQQGNNHTN G TGHPGNQDSS Site 4843
Schizosaccharomyces.octosporus.b.IME2 KDSQMCNFLM S ETMNSNESPA Site 4734
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 LSSPLVKEEE T SRRMLGEGGV Site 3301
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos SNSFFPSETR K DKVQGCHHSS Site 3916
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PLRTTSSYNS L VPVQDQHQPI Site 4596
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ----VGKEHE K AARRPAKLTR Site 4873
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -----EPVAE  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca RSNNLHPERL G VSASHNNVLL Site 3301
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ESASMIRNPN D IMMKYNSNGR Site 3227
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. TTTTTTTSSS Q PSNVKNISTV Site 3273
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. SLVHNSSHWY T TVLIGTQQFS Site 4871
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET TKNGVVKGQP S PSGAAVNSSE Site 4874
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ERKTLVVQDT N ADPKIKDYKL Site 3548
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U TKNGVVKGQP S PSGAAVNSSE Site 4874
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - -----ETEAQ  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo EKNLSSVRQV K EIIHQFILEQ Site 4874
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar SLYDSAINPF K ICSQTNLKDS Site 3534
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. AKNGVIRGQP A PLGAAVTDGS Site 4874
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PHILPPEKRP P EPPGPPPPPP Site 3873
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. GRKQKQSLRH E EGHARRQGPT Site 4791
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 SSRRRVSGAL D NSGNISNQPT Site 2784
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PPAHAHQQHG Q QPHPQSSQHP Site 4468
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl EKNLSSVRQV K EIIHQFILEQ Site 4874
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 AKEHNKPTRK T LRKSRKHHCF Site 4873
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TISSDTDEEE T SQRHSLRECK Site 4589
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O SMFPTWPAKS E QQRVKRGTSP Site 4871
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d TSPFSSQQRP H RHSMYVRRER Site 4331
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O SMFPTWPAKS E QQRVKRGTSP Site 4871
Naegleria.gruberi.LF4 IQNQAQNHNN N SNMVVLPTIY Site 4740
Saccharomyces.bayanus.IME2 EIRNNLALCQ L PDEEVLDHSL Site 3999
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --------AS L LQQRQVLAQV Site 3996
Dictyostelium.discoideum.DYRK1..Probable.serine.th QQQQQQQQQQ Q QTYSPTTQQS Site 3888
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos MNSPQVLPSQ P LRPWAGGDVP Site 3891
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ---ESTGAIT  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ANSLQLLSPQ P GEQLPPEMTV Site 4489
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RKRGPKPPRS P GHDPEHVEVR Site 4731
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---EPAETSS S DFKRILNELV Site 4873
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos EKHLENSGKQ Q SSVEHTADTI Site 3958
Aspergillus.nidulans.IME2 AKQNSDFSEL D KAVQNVRYSM Site 4732
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se KDMSRLSMFE L REKMYQFVMD Site 4874
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. KESPFRFPDS G LPVSNHFKGE Site 4697
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. TKNGVVKGQP S PSGAAVNSSE Site 4874
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - -------RLP  
Penicillium.marneffei.IME2 TGDFTELDKT L QNVKYGLSSA Site 4734
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a VDPRKDSHSS S ERFLEQSHSS Site 4741
Drosophila.melanogaster.MAK APPSLIVRQP Q LQPEVAPAPM Site 4694
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PHILPPEKRP P EPPGPPPPPP Site 3875
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin TKNGVVKGQP S PSGAAVNSSE Site 4874
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SKNGVVKDQP S DAAVSSNATP Site 4876
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - --------SP  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen FNFSAGELSI Q PSLNAILIPP Site 4873
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - -PQIYDAQLE  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --RMGSSSMP G GSTPVSSANM Site 3959
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a VDPRKDSQSS S ERFLEQSHSS Site 4741
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - --------KL  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --RMGSSSMP G GSTPVSSANM Site 3959
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ---NVFERQE  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -ETEAPPYDD S LEGEKLSVEE Site 4874
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos MNSPQVPPSQ P LRPWAGGDVP Site 3891
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD KLAKTLIPSH A MNQIELPSPL Site 4792
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - --------GP  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - --------AG  
Debaryomyces.hansenii.IME2 TEFQIHDDFD D GYEKEFMKEY Site 3628
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin PPQQQTVNNN G VTNSSIGGLG Site 4813
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - --ELPIPQRP  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ----TMDKVP G KRVVNPTNAF Site 3958
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg LVPQLLPKHL Q NASGPGGNRP Site 4513
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GPRPRPQSSP G HDPAEHESPR Site 4728
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d IDHSRNPGTA I PPLTHNLSAV Site 3541
Dictyostelium.discoideum.CDK10..Probable.cyclin.de PKFPTISKSF K NQNKKQNNNF Site 4873
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d EQLPPEMTVA R SSVKETSREG Site 4409
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa LLKELIYNEM L AYHPEDPQAP Site 4870
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac TKNGVIRGQP S PLGAAVINGS Site 4873
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - ETEAQQPFDD  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri SYEKSLTSVW Q VKELVHRFIT Site 4874
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha TKNGVVKGQP S PSGAAVNSSE Site 4874
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 PSLPFRYHCN K PAQLPTLPIE Site 4798
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - ------EPEA  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ANSLQLLSPQ Q SDQIPSETNL Site 4523
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D AESEPLKETT E QESKTIKVIE Site 4639
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U VPPLKTQPSE G RLECERKQPD Site 4718
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ----LTRQHD K PARKTLRQSR Site 4873
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ELSIQPSLNA I LIPPHLRSPA Site 4873
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro SVFEGSSITY P TRRVTHEDNG Site 4812
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ---GNLLPRP  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - --ELPIPQRL  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---QMAKGTT E EMKYVLGQLV Site 4873
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen FNFTTQELSS N PPLATILIPP Site 4873
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable PADGEMAEAS C GVFWLLSLLG Site 4768
Aspergillus.fumigatus.IME2 NAGDAKQNSD L NDLDRALQNV Site 4736
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan QQQQGNNHTN G AGHTGNPDNS Site 4843
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - -----ETEAQ  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S KDMSRLSMFE L REKMYQFVMD Site 4874
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma VIPDTPSPTV S VITISSDTDE Site 4613
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ---------E  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - --------AL  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------SVTR E LDRKKRTRQP Site 4873
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ---------P  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 ELGNCNGSEI T KTDFMKSGQL Site 3606
Homo.sapiens.MAK..Serine.threonine.protein.kinase. KDSPFRLPEP V PSGSNHSTGE Site 4698
Schizosaccharomyces.pombe.IME2 DIADSITSST F FPVLPQIRPS Site 4713
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ARRGLWSDTR A DMVSDMLVPL Site 4755
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - -KRKARSEGR  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH NSRNPDASPR H LPELFNFSPF Site 4874
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD QSKSDLKFPT S TSKIPLTNPQ Site 3619
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. LDDLDFSPSL S RIDLKNKKRQ Site 4676
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos TTFHVAPQQN A LHHHHGNSSH Site 3842
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act MAQPPAPAPA T ARPPSPPAGP Site 4447
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - ------EPVA  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a EKSDKRGKSK C ERNGLVKAQI Site 4698
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ------EPKA  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U GSSPLQASSS Y NPLLPLQEQR Site 4588
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --RMGSSNMP G GSTPVSSASM Site 3959
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - --------QK  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos TTFHVAPQQN A LHHHHGNSSH Site 3842
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen FNFTTQELSS N PPLATILIPP Site 4873
Drosophila.melanogaster.GSK3H..Putative.glycogen.s LLPRAQGSST T KEPSAAHRNR Site 4509
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 FLKETEVKDE E QDSESTLSGA Site 3972
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 AERQAKELAK A QREAAALKQK Site 4695
Homo.sapiens.HIPK4..Homeodomain.interacting.protei AGHGLWGETC T NAVSDMMVPL Site 4754
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 EYDEFASASA S RDCSEPGVSS Site 4825
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PLRTTSSYNS L VPVQDQHQPI Site 4596
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQQQQQAN Q QAQQNQQQQA Site 4806
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - --HSELPIPQ  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -----GCKEP E RSGRRHEKAP Site 4874
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. GRKQKQSLKQ E EDRPKRRGPA Site 4792
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca APAAGMAASS T PVSSSSLMAG Site 3959
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a MARPPAPAPA P APAPAPAPSS Site 4422
Mus.musculus.ICK..Serine.threonine.protein.kinase. LDFSPSLTRI D VKNKKRQSDD Site 4679
Saccharomyces.castelli.IME2 DENDDENGIF S DTDSTEEDEI Site 3957
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - ------GCQL  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --------EL  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - --------RT  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -------GPQ  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - LKGMLSTHLT  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei VIPDTPSPTV S VITISSDTDE Site 4611
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 ATLNKLVGIP N SPSRKLMAPA Site 4806
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQQQQQQ Site 4852
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G LESILLPPHV S KASATPSSTS Site 4872
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - --------KL  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - --------AL  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - -----ETEAQ  
Candida.albicans.SSN3..Serine.threonine.protein.ki KIYTDDNDIM T TAANNNNNNN Site 4839
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF HRSHAAASSV H SGYHAGASSY Site 4752
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA RELPPLFNFT A GELASKPSLR Site 4873
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SRNVNYQPKR Q QNFKPLTSDL Site 4488
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -RMGGSNMPS G SSTPVSSASM Site 3959
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U INSDTDEDDP A QTLSLRECKR Site 4593
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d SMFPTWPAKS E QQRVKRGTSP Site 4871
Candida.dubliniensis.IME2 GIPNSPSRKL L TPLKLQKNST Site 4811
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a WEERSKNGVK D QPSDAAVSSK Site 4873
Aspergillus.niger.IME2 SDLSELDKAL Q TVKYSLDSAA Site 4733
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - ------EPIA  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d EPPNPINPST N CNGLKENPHC Site 3520
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - --------EL  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --RMGSSSMP G GSTPVSSANV Site 3959
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QNYHNPNYQY S QQPQSSSQQQ Site 3865
Schizosaccharomyces.japonicus.IME2 LSEHKAAQNI L FPVLPELRPT Site 4750
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ------KLPD S RHGTGQLRDL Site 4872
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ------EPQV  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ESASPDSELS S HASSVEIGKP Site 3983
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 EIRNNLALCQ L PDEEVLDHSL Site 3999
Schizosaccharomyces.japonicus.b.IME2 SHNTSKTHSL S TPLKHNFGHS Site 4715
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a EKSDKKGKSK C ERNGLVKAQI Site 4697
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - ----DTYVKA  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - ------ETEA  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KPSVLELTNP L NPSENSDGVK Site 3514
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - PAITDKQLDE  
Candida.albicans.IME2 GIPNSPSRKL L TPSKLQKNSN Site 4811
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 DSMETMTGSD Q ISKELNDKIE Site 3948
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PAAPALTSVP A PAPAPTPTPT Site 4415
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. TKNGVVKSQP S PSGAAVNSSE Site 4874
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - ------EPEA  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - ------EPEA  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ----PSMFPT W PAKSELGARK Site 4557
Neurospora.crassa.IME2 QPHGVGCGPW G SNRSSMVIDS Site 4720
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 NNNTPTPTTT T TTTTTTPTPA Site 3934
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---QMARGAT D EMKYVLGQLV Site 4873
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---TTIDKVS G KRVVNPASAF Site 3958
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace LEEKPAEVHV D GGLTRSSEAD Site 4718
Schizosaccharomyces.pombe.b.IME2 STGHLANPIA S SNVPAISLKP Site 4776
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom VSVITISSDS D DEETSPRPSL Site 4585
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas TSPRPVSGME R ERKVSMRLHR Site 3301
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ---------P  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable PEDVEIAEAG C AVLWLLSLLG Site 4753
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 TGTTNFEVEA L MESTEARVTV Site 3936
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil MNLGSRTKNN T QASGITAGAA Site 4812
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly HNSGTVRDLP P LFDFTRHELS Site 4872
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk NSRNPDASPR H LPELFNFSPF Site 4874
Species Residue at Site 2479
in 'muscle'
msaprobs

The residue for every species at site 2479 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro PNYQYSQPQQ Q QQQQYQQTQR Site 3880
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo EKNLSSVRQV K EIIHQFILEQ Site 4874
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 09:58, September 27th 2020
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