cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2478 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2478 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2478 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2478 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ISTPMYRPPS P FFPILPQIRP Site 4703
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 GPYDIEVDES Q IACQSPRTDH Site 4872
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ DSYAQRPRET V SMSLKEIMHS Site 3132
Chlamydomonas.reinhardtii.LF4 GGGYGRLPGL A AQSSMASVDG Site 4668
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g HCSRDEGTIE R HLPPLFNFNL Site 4872
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 QQQQAQAQAQ A QAQAKVQQQQ Site 3230
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho QQQQQGNNHT N GTGHPGNQDS Site 4842
Schizosaccharomyces.octosporus.b.IME2 EKDSQMCNFL M SETMNSNESP Site 4733
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ILSSPLVKEE E TSRRMLGEGG Site 3300
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - ----------  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos KSNSFFPSET R KDKVQGCHHS Site 3915
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SPLRTTSSYN S LVPVQDQHQP Site 4595
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -----VGKEH E KAARRPAKLT Site 4872
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - ------EPVA  
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca SRSNNLHPER L GVSASHNNVL Site 3300
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 RESASMIRNP N DIMMKYNSNG Site 3226
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. QTTTTTTTSS S QPSNVKNIST Site 3272
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. FSLVHNSSHW Y TTVLIGTQQF Site 4870
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET RTKNGVVKGQ P SPSGAAVNSS Site 4873
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 EERKTLVVQD T NADPKIKDYK Site 3547
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U RTKNGVVKGQ P SPSGAAVNSS Site 4873
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - ------ETEA  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo FEKNLSSVRQ V KEIIHQFILE Site 4873
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar SSLYDSAINP F KICSQTNLKD Site 3533
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. RAKNGVIRGQ P APLGAAVTDG Site 4873
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PPHILPPEKR P PEPPGPPPPP Site 3872
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. EGRKQKQSLR H EEGHARRQGP Site 4790
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ESSRRRVSGA L DNSGNISNQP Site 2783
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QPPAHAHQQH G QQPHPQSSQH Site 4467
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl FEKNLSSVRQ V KEIIHQFILE Site 4873
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 LAKEHNKPTR K TLRKSRKHHC Site 4872
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ITISSDTDEE E TSQRHSLREC Site 4588
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PSMFPTWPAK S EQQRVKRGTS Site 4870
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d YTSPFSSQQR P HRHSMYVRRE Site 4330
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PSMFPTWPAK S EQQRVKRGTS Site 4870
Naegleria.gruberi.LF4 NIQNQAQNHN N NSNMVVLPTI Site 4739
Saccharomyces.bayanus.IME2 KEIRNNLALC Q LPDEEVLDHS Site 3998
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - ----------  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------A S LLQQRQVLAQ Site 3995
Dictyostelium.discoideum.DYRK1..Probable.serine.th QQQQQQQQQQ Q QQTYSPTTQQ Site 3887
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos EMNSPQVLPS Q PLRPWAGGDV Site 3890
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----ESTGAI  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RANSLQLLSP Q PGEQLPPEMT Site 4488
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ARKRGPKPPR S PGHDPEHVEV Site 4730
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ----EPAETS S SDFKRILNEL Site 4872
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos AEKHLENSGK Q QSSVEHTADT Site 3957
Aspergillus.nidulans.IME2 EAKQNSDFSE L DKAVQNVRYS Site 4731
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se EKDMSRLSMF E LREKMYQFVM Site 4873
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. KKESPFRFPD S GLPVSNHFKG Site 4696
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. KTKNGVVKGQ P SPSGAAVNSS Site 4873
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - --------RL  
Penicillium.marneffei.IME2 KTGDFTELDK T LQNVKYGLSS Site 4733
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a QVDPRKDSHS S SERFLEQSHS Site 4740
Drosophila.melanogaster.MAK QAPPSLIVRQ P QLQPEVAPAP Site 4693
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PPHILPPEKR P PEPPGPPPPP Site 3874
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin KTKNGVVKGQ P SPSGAAVNSS Site 4873
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a RSKNGVVKDQ P SDAAVSSNAT Site 4875
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - ---------S  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LFNFSAGELS I QPSLNAILIP Site 4872
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - --PQIYDAQL  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---RMGSSSM P GGSTPVSSAN Site 3958
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a QVDPRKDSQS S SERFLEQSHS Site 4740
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - ---------K  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---RMGSSSM P GGSTPVSSAN Site 3958
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - ----NVFERQ  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --ETEAPPYD D SLEGEKLSVE Site 4873
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos EMNSPQVPPS Q PLRPWAGGDV Site 3890
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD PKLAKTLIPS H AMNQIELPSP Site 4791
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - ---------G  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - ---------A  
Debaryomyces.hansenii.IME2 KTEFQIHDDF D DGYEKEFMKE Site 3627
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin HPPQQQTVNN N GVTNSSIGGL Site 4812
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - ----------  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - ---ELPIPQR  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -----TMDKV P GKRVVNPTNA Site 3957
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg SLVPQLLPKH L QNASGPGGNR Site 4512
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. QGPRPRPQSS P GHDPAEHESP Site 4727
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d NIDHSRNPGT A IPPLTHNLSA Site 3540
Dictyostelium.discoideum.CDK10..Probable.cyclin.de MPKFPTISKS F KNQNKKQNNN Site 4872
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d GEQLPPEMTV A RSSVKETSRE Site 4408
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa DLLKELIYNE M LAYHPEDPQA Site 4869
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac RTKNGVIRGQ P SPLGAAVING Site 4872
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - -ETEAQQPFD  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri DSYEKSLTSV W QVKELVHRFI Site 4873
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha KTKNGVVKGQ P SPSGAAVNSS Site 4873
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 SPSLPFRYHC N KPAQLPTLPI Site 4797
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - -------EPE  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar RANSLQLLSP Q QSDQIPSETN Site 4522
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D EAESEPLKET T EQESKTIKVI Site 4638
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U IVPPLKTQPS E GRLECERKQP Site 4717
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -----LTRQH D KPARKTLRQS Site 4872
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GELSIQPSLN A ILIPPHLRSP Site 4872
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro KSVFEGSSIT Y PTRRVTHEDN Site 4811
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - ----GNLLPR  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - ---ELPIPQR  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ----QMAKGT T EEMKYVLGQL Site 4872
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen LFNFTTQELS S NPPLATILIP Site 4872
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable YPADGEMAEA S CGVFWLLSLL Site 4767
Aspergillus.fumigatus.IME2 VNAGDAKQNS D LNDLDRALQN Site 4735
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan QQQQQGNNHT N GAGHTGNPDN Site 4842
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ------ETEA  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S EKDMSRLSMF E LREKMYQFVM Site 4873
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma IVIPDTPSPT V SVITISSDTD Site 4612
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - ---------A  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -------SVT R ELDRKKRTRQ Site 4872
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - ----------  
Candida.glabrata.IME2 IELGNCNGSE I TKTDFMKSGQ Site 3605
Homo.sapiens.MAK..Serine.threonine.protein.kinase. KKDSPFRLPE P VPSGSNHSTG Site 4697
Schizosaccharomyces.pombe.IME2 EDIADSITSS T FFPVLPQIRP Site 4712
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - ----------  
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom EARRGLWSDT R ADMVSDMLVP Site 4754
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - --KRKARSEG  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH HNSRNPDASP R HLPELFNFSP Site 4873
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD KQSKSDLKFP T STSKIPLTNP Site 3618
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. DLDDLDFSPS L SRIDLKNKKR Site 4675
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ETTFHVAPQQ N ALHHHHGNSS Site 3841
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act RMAQPPAPAP A TARPPSPPAG Site 4446
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - -------EPV  
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a KEKSDKRGKS K CERNGLVKAQ Site 4697
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - -------EPK  
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U VGSSPLQASS S YNPLLPLQEQ Site 4587
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---RMGSSNM P GGSTPVSSAS Site 3958
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - ---------Q  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ETTFHVAPQQ N ALHHHHGNSS Site 3841
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen LFNFTTQELS S NPPLATILIP Site 4872
Drosophila.melanogaster.GSK3H..Putative.glycogen.s LLLPRAQGSS T TKEPSAAHRN Site 4508
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - ----------  
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 EFLKETEVKD E EQDSESTLSG Site 3971
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - ----------  
Cryptococcus.neoformans.IME2 EAERQAKELA K AQREAAALKQ Site 4694
Homo.sapiens.HIPK4..Homeodomain.interacting.protei EAGHGLWGET C TNAVSDMMVP Site 4753
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 EEYDEFASAS A SRDCSEPGVS Site 4824
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SPLRTTSSYN S LVPVQDQHQP Site 4595
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQQQQQQA N QQAQQNQQQQ Site 4805
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - ---HSELPIP  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------GCKE P ERSGRRHEKA Site 4873
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. EGRKQKQSLK Q EEDRPKRRGP Site 4791
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca GAPAAGMAAS S TPVSSSSLMA Site 3958
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a RMARPPAPAP A PAPAPAPAPS Site 4421
Mus.musculus.ICK..Serine.threonine.protein.kinase. DLDFSPSLTR I DVKNKKRQSD Site 4678
Saccharomyces.castelli.IME2 DDENDDENGI F SDTDSTEEDE Site 3956
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - -------GCQ  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---------E  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - ---------R  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - --------GP  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - -LKGMLSTHL  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei IVIPDTPSPT V SVITISSDTD Site 4610
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 NATLNKLVGI P NSPSRKLMAP Site 4805
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin RQQQQQQQQQ Q QQQQQQQQQQ Site 4851
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SLESILLPPH V SKASATPSST Site 4871
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - ---------K  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - ---------A  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - ------ETEA  
Candida.albicans.SSN3..Serine.threonine.protein.ki RKIYTDDNDI M TTAANNNNNN Site 4838
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF SHRSHAAASS V HSGYHAGASS Site 4751
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA GRELPPLFNF T AGELASKPSL Site 4872
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - ----------  
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de RSRNVNYQPK R QQNFKPLTSD Site 4487
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --RMGGSNMP S GSSTPVSSAS Site 3958
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TINSDTDEDD P AQTLSLRECK Site 4592
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PSMFPTWPAK S EQQRVKRGTS Site 4870
Candida.dubliniensis.IME2 AGIPNSPSRK L LTPLKLQKNS Site 4810
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DWEERSKNGV K DQPSDAAVSS Site 4872
Aspergillus.niger.IME2 NSDLSELDKA L QTVKYSLDSA Site 4732
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - -------EPI  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d IEPPNPINPS T NCNGLKENPH Site 3519
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - ---------E  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---RMGSSSM P GGSTPVSSAN Site 3958
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QQNYHNPNYQ Y SQQPQSSSQQ Site 3864
Schizosaccharomyces.japonicus.IME2 KLSEHKAAQN I LFPVLPELRP Site 4749
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - ----------  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -------KLP D SRHGTGQLRD Site 4871
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - -------EPQ  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 NESASPDSEL S SHASSVEIGK Site 3982
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 KEIRNNLALC Q LPDEEVLDHS Site 3998
Schizosaccharomyces.japonicus.b.IME2 PSHNTSKTHS L STPLKHNFGH Site 4714
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a KEKSDKKGKS K CERNGLVKAQ Site 4696
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - -----DTYVK  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - -------ETE  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KKPSVLELTN P LNPSENSDGV Site 3513
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - -PAITDKQLD  
Candida.albicans.IME2 AGIPNSPSRK L LTPSKLQKNS Site 4810
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - ----------  
Kluyveromyces.lactis.IME2 DDSMETMTGS D QISKELNDKI Site 3947
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina RPAAPALTSV P APAPAPTPTP Site 4414
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. KTKNGVVKSQ P SPSGAAVNSS Site 4873
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - -------EPE  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - -------EPE  
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -----PSMFP T WPAKSELGAR Site 4556
Neurospora.crassa.IME2 TQPHGVGCGP W GSNRSSMVID Site 4719
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - ----------  
Ashbya.gossypii.IME2 NNNNTPTPTT T TTTTTTTPTP Site 3933
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ----QMARGA T DEMKYVLGQL Site 4872
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ----TTIDKV S GKRVVNPASA Site 3957
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace KLEEKPAEVH V DGGLTRSSEA Site 4717
Schizosaccharomyces.pombe.b.IME2 ESTGHLANPI A SSNVPAISLK Site 4775
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom AVSVITISSD S DDEETSPRPS Site 4584
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas NTSPRPVSGM E RERKVSMRLH Site 3300
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable HPEDVEIAEA G CAVLWLLSLL Site 4752
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 STGTTNFEVE A LMESTEARVT Site 3935
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil IMNLGSRTKN N TQASGITAGA Site 4811
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RHNSGTVRDL P PLFDFTRHEL Site 4871
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk HNSRNPDASP R HLPELFNFSP Site 4873
Species Residue at Site 2478
in 'muscle'
msaprobs

The residue for every species at site 2478 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro NPNYQYSQPQ Q QQQQQYQQTQ Site 3879
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo FEKNLSSVRQ V KEIIHQFILE Site 4873
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 05:52, July 7th 2020
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