cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2253 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2253 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2253 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2253 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 Q-----KPRK - ---EKETKAN  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD N--------- - ----------  
Danio.rerio.CDK1 P--------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge D--------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d P--------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 E-----TSLF - ---KRSGNVS  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ A-----GERT - ---SGAAGPS  
Chlamydomonas.reinhardtii.LF4 A-----LLAP - ---DVSNHFT  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g C--------- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 K-----SKRH - ---RSKNHQY  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho S--------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 N-----GQQG - ---TKLGSTK  
Candida.albicans.MAPK3..Extracellular.signal.regul D--------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 A-----VALD - ---QQQEERI  
Suberites.domuncula.JNK..Stress.activated.protein. P-----PKRY - ---DHALDEQ  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase P--------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos P--------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei Q--------- - ---TGLQATT  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar D--------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 N--------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. S--------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM D--------- - ----------  
Strongylocentrotus.purpuratus.CDK1 T--------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca V-----GVAR - ---PINASGL  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 N--------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. Q-----QIQQ - ---QQQAQQQ  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d H--------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. F----ELPDG M QVHFVLYLLD Site 4558
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET P--------- - ---PQIYDKQ  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 R-----NVSL - ---SKKSQNR  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U P--------- - ---PQIYDKQ  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. E--------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo H--------- - ----------  
Bombus.terrestris.CDK1 P--------- - ---PLPKKT-  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 S--------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar K-----LRIH - ---KEARDHQ  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. P--------- - ---PKIPDKQ  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PDLPHWQDCH E LWSKKRRRQR Site 3647
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. A-----KHRR - ---AFCPKFS  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. T--------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G T--------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 P-----GISN - ---IDRYTG-  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO Q-----QYVN - ---VPVPVSM  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl H--------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 D--------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei SIRVDNTVPL V TQAPAVQPLQ Site 3593
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O D--------- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d P-----HLLS - ---PKDAKGK  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci P--------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O D--------- - ----------  
Naegleria.gruberi.LF4 G-----GQSI - ---PSPSPLM  
Saccharomyces.bayanus.IME2 QALIFAGINP L AAKNTKPLCF Site 3902
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. S--------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a A-----PPYD - ---HSLDEAD  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki N-----PADL - ---PVPFAKK  
Dictyostelium.discoideum.DYRK1..Probable.serine.th P-----PQQQ - ---SQQQSQQ  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos P-----AGSS A STSPAPLDTC Site 3827
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos P-----TGEK - ---TSVKRIT  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d P-----SEGP - ---GTKYLKS  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a R-----ESDV - ---RLPVHEG  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific P--------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos P----RPKPQ I LRKPGASISS Site 3905
Aspergillus.nidulans.IME2 S----VRPRS S TARLLGRKQS Site 4506
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi S--------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se H--------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. S-----SSER - ---DPKPLPN  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep P--------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. P--------- - ---PQIYDKQ  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. S--------- - ----------  
Penicillium.marneffei.IME2 E-----KSFK - ---PAPTKET  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen D--------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a S--------- - ---QHPFRIE  
Drosophila.melanogaster.MAK T-----KANV - ---RLNSKYA  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH K--------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr I--------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PDLPHWQDCH E LWSKKRRRQR Site 3649
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep S--------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d E--------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin P--------- - ---PQIYDKQ  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a P--------- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase L--------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis L--------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p T--------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen T--------- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. P--------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki A--------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a S--------- - ---QHPFRIE  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d H--------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. A--------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein Q--------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. E--------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos N----TGPAG S SASTSPAPLD Site 3825
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE A--------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH T--------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD D-----GKPL - ---PPLFNFT  
Candida.orthopsilosis.IME2 K--------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot P--------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str S--------- - ----------  
Debaryomyces.hansenii.IME2 K-----MTRP - ---SPLKEVN  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati T--------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin S-----SDVF E GLSYKYPPRR Site 4769
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE N-----RPSV - ---AKLKEEI  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO M--------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de S--------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos L--------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. E--------- - ----------  
Monosiga.brevicollis.CDK1 L--------- - ----------  
Saccharomyces.cerevisiae.SKY1 E--------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP D--------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U K--------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg N-----GRDM - ---PPLFNFT  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. D----EWARE A DVRPRAHEGV Site 4552
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d Q----LKIEK D ARNNSLPKKS Site 3339
Dictyostelium.discoideum.CDK10..Probable.cyclin.de S--------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d P----GTKYL K SNSRSQQNRH Site 4183
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa D-----EPIC - ---LHKFSLN  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep E--------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep E--------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac P--------- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. E--------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO L--------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri H--------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha P--------- - ---PQIYDKQ  
Saccharomyces.cerevisiae.CDK1 S--------- - ----------  
Lodderomyces.elongisporus.IME2 D-----KYHE - ---ISSSMGM  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen D--------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un A--------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar P--------- - ---GTKYLKS  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. G--------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D E-----RKKE - ---PSSVEVT  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U F----TPIRN T HAHGTHYNPI Site 4492
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d E--------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen P--------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep E--------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro T--------- - ----------  
Salmo.salar.CDK1 P--------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d P--------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d S--------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi N--------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen V--------- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable E----EEPLL V MVYSLLAITT Site 4677
Aspergillus.fumigatus.IME2 S-----TSRL - ---LGRKQSD  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan T----SDVFA G CQIPYPKREF Site 4807
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha A--------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha E--------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S H--------- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma A----LIVCP P GFQGLQASPS Site 3617
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina D--------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d H--------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. E--------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de E--------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S A--------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. A-----EPYD - ---QTFEGVE  
Candida.glabrata.IME2 D-----TNFE - ---NVPLDDR  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. P----DIIDQ V VGQPQPKTSQ Site 4585
Schizosaccharomyces.pombe.IME2 S-----KEEV - ---NKNTDFR  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P D--------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl H--------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom E----ATRYY Q LSLRGCRLSL Site 4670
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. A--------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d H--------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d M--------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara S--------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH T--------- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD N-----KPDL - ---LEKIHRF  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR A--------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. P-----VPPA - ---QPPAKPH  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos E-----QSQS - ---SGTTSST  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep P--------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act P----APLPC P GPAPDTIDLT Site 4304
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. D--------- - ----------  
Lachancea.thermotolerans.SKY1 G--------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a S--------- - ---SHPFHIE  
Dictyostelium.discoideum.CDK1 F--------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. D--------- - ----------  
Xenopus.tropicalis.IME2 P--------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U A--------- - ---AGLQATT  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. A--------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d P----HLI-- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara T--------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. Y--------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD F-----DRII - ---KISIDDG  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos T----NTSNS V STSPAMEQSQ Site 3738
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen V--------- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s N-----GRSL - ---PPLFNFT  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD L--------- - ----------  
Encephalitozoon.cuniculi.CDK1 E--------- - ----------  
Saccharomyces.kluyveri.IME2 N-----NSTD - ---STNAERA  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a D--------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. Y--------- - ----------  
Cryptococcus.neoformans.IME2 A-----DARA - ---AQYAQSP  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei E----TTHYY Q LSLRSYRLSL Site 4670
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote S--------- - ----------  
Candida.lusitaniae.IME2 K-----EMLN - ---LLPTPVS  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom Q--------- - ---TGLQATT  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A A-----GCPI - ---PYPKREF  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep H--------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. E--------- - ----------  
Gallus.gallus.CDK2 P--------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. K----RALGS H RKAGFPEHPV Site 4757
Homo.sapiens.CDK1 K-----KM-- - ----------  
Candida.albicans.CDK1 H--------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca G--------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a P----ALPPC S DPAPDTVDLT Site 4279
Mus.musculus.ICK..Serine.threonine.protein.kinase. A----PAKAY T LISSRPSQAS Site 4576
Saccharomyces.castelli.IME2 S-----MKNS - ---NTKGESR  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec R-----K--- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep P--------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. W--------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly A--------- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS Y--------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli P--------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho D--------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei A----LIVCP P GFQGLQASPS Site 3615
Acyrthosiphon.pisum.CDK1 P--------- - ----------  
Candida.tropicalis.CDK1 D--------- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin Q-------DV F AGCPIPYPKR Site 4815
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G N-----GREF - ---PLSLTLH  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR G--------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de H--------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d H--------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA E--------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki E-----NAFE - ---GLNYKYP  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF K----RQYAL M NPKADGTLSG Site 4661
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA N--------- - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara P-----TAYD - ---DSYDNAT  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de S-----ELQS - ---YSASHEY  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei S--------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SVRVDNALPL V TQAPAIQPLQ Site 3597
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d D--------- - ----------  
Candida.dubliniensis.IME2 D--------- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a P--------- - ---PQIYDAQ  
Aspergillus.niger.IME2 K----SSTAR L LGRKQSDKSF Site 4507
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge D--------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d K-----VNSL - ---IKPKESS  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. W--------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein A--------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty P--------- - ----------  
Schizosaccharomyces.japonicus.IME2 T-----AYLQ - ---KKTSRTS  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. P--------- - ---PLPYDHN  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep P--------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P T--------- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. A--------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. D--------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ E--------- - ----------  
Kluyveromyces.waltii.IME2 L-----GTEM - ---LVQHQAA  
Debaryomyces.hansenii.SKY1 N--------- - ----------  
Saccharomyces.cerevisiae.IME2 F----AGINP V ATNTKPIYFN Site 3903
Schizosaccharomyces.japonicus.b.IME2 E-----STIS - ---PSSPARY  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un D--------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein S--------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a S--------- - ---SHPFHIE  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep D--------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST T--------- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk D--------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de L----LQEAK V NSFIKPKENF Site 3412
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act P--------- - ----------  
Candida.albicans.IME2 D--------- - ---TYFETDT  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d S--------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k D--------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. A--------- - ----------  
Kluyveromyces.lactis.IME2 K-----NNQM - ---NCVTDKS  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina P----APPPC P GPAPDTIDLT Site 4269
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. P--------- - ---PQIYDKQ  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. D--------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. D--------- - ----------  
Amphimedon.queenslandica.CDK1 E--------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d I--------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME D--------- - ----------  
Neurospora.crassa.IME2 S-----ASRI - ---LGRKQSD  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME H--------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep E--------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar E--------- - ----------  
Ashbya.gossypii.IME2 P-----LSTA - ---QSALMFA  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi S--------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos L--------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p G--------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace S--------- - ----------  
Schizosaccharomyces.pombe.b.IME2 K-----SNSV - ---PQKISNP  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a D--------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom AFHQTLIICP P AIQGIPAAHG Site 3589
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 P--------- - ---EHLPK--  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas S-----TASG - ---RLRGTQE  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac P--------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep P--------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable P----NSERL V NVVYNVLAII Site 4663
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep A--------- - ----------  
Yarrowia.lipolytica.IME2 P-----ILMD - ---PSLRHNN  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil S-----ENVF E GLTYKYPARR Site 4783
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli P--------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K L--------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly T--------- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk T--------- - ----------  
Species Residue at Site 2253
in 'muscle'
msaprobs

The residue for every species at site 2253 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro P--------- - ---VSHSNLQ  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo H--------- - ----------  
Scheffersomyces.stipitis.SKY1 N--------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep P--------- - ----------  

Generated by PhyloBot at 04:30, November 12th 2019
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