cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2251 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2251 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2251 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2251 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 KVQ-----KP R K----EKETK Site 4614
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD FLN------- - ----------  
Danio.rerio.CDK1 PVP------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ISD------- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d CPP------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 AME-----TS L F----KRSGN Site 4804
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ MRA-----GE R T----SGAAG Site 3082
Chlamydomonas.reinhardtii.LF4 QKA-----LL A P----DVSNH Site 4566
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g PNC------- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NEK-----SK R H----RSKNH Site 3198
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PTS------- - ----------  
Schizosaccharomyces.octosporus.b.IME2 SPN-----GQ Q G----TKLGS Site 4653
Candida.albicans.MAPK3..Extracellular.signal.regul PND------- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 SLA-----VA L D----QQQEE Site 3265
Suberites.domuncula.JNK..Stress.activated.protein. APP-----PK R Y----DHALD Site 4895
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci HT-------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase EPP------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos LKP------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei AFQ------- - -----TGLQA  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar AGD------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 FNN------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. EQS------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM PGD------- - ----------  
Strongylocentrotus.purpuratus.CDK1 LPT------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca HQV-----GV A R----PINAS Site 3267
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ANN------- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. IQQ-----QI Q Q----QQQAQ Site 3243
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d RVH------- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. KLF----ELP D GMQVHFVLYL Site 4556
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET APP------- - -----PQIYD  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 DAR-----NV S L----SKKSQ Site 3517
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U APP------- - -----PQIYD  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. PEE------- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo RYH------- - ----------  
Bombus.terrestris.CDK1 VPP------- - -----PLPKK  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --S------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ELK-----LR I H----KEARD Site 3457
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. APP------- - -----PKIPD  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d APPDLPHWQD C HELWSKKRRR Site 3645
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. TLA-----KH R R----AFCPK Site 4757
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. PTT------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G SAT------- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 LPP-----GI S N----IDRYT Site 2757
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PPQ-----QY V N----VPVPV Site 4244
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl RYH------- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 IED------- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei SYSIRVDNTV P LVTQAPAVQP Site 3591
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PID------- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d NLP-----HL L S----PKDAK Site 4107
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci EPP------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PID------- - ----------  
Naegleria.gruberi.LF4 FGG-----GQ S I----PSPSP Site 4693
Saccharomyces.bayanus.IME2 TEQALIFAGI N PLAAKNTKPL Site 3900
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. EQS------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a TEA-----PP Y D----HSLDE Site 4884
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki HTN-----PA D L----PVPFA Site 3985
Dictyostelium.discoideum.DYRK1..Probable.serine.th SQP-----PQ Q Q----SQQQS Site 3807
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos TGP-----AG S SASTSPAPLD Site 3825
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos KPP-----TG E K----TSVKR Site 3953
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d TKP-----SE G P----GTKYL Site 4268
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a WAR-----ES D V----RLPVH Site 4549
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific PAP------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos FKP----RPK P QILRKPGASI Site 3903
Aspergillus.nidulans.IME2 PLS----VRP R SSTARLLGRK Site 4504
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi MCS------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se RFH------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. KPS-----SS E R----DPKPL Site 4573
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep PVP------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. APP------- - -----PQIYD  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. PNS------- - ----------  
Penicillium.marneffei.IME2 MSE-----KS F K----PAPTK Site 4510
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen PDD------- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a PTS------- - -----QHPFR  
Drosophila.melanogaster.MAK AAT-----KA N V----RLNSK Site 4470
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -KK------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr EKI------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de APPDLPHWQD C HELWSKKRRR Site 3647
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep AFS------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d EPE------- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin APP------- - -----PQIYD  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a APP------- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --L------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis MSL------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p WTT------- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LGT------- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. APP------- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki DQA------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PTS------- - -----QHPFR  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d RIH------- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. DQA------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein VSQ------- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ADE------- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ATN----TGP A GSSASTSPAP Site 3823
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE AHA------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ERT------- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD LPD-----GK P L----PPLFN Site 4764
Candida.orthopsilosis.IME2 --K------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot PTP------- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str CSS------- - ----------  
Debaryomyces.hansenii.IME2 SNK-----MT R P----SPLKE Site 3548
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati PNT------- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin PVS-----SD V FEGLSYKYPP Site 4767
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE TQN-----RP S V----AKLKE Site 4894
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO GQM------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de HPS------- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos KPL------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. CKE------- - ----------  
Monosiga.brevicollis.CDK1 KAL------- - ----------  
Saccharomyces.cerevisiae.SKY1 MEE------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP PND------- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ADK------- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg LPN-----GR D M----PPLFN Site 4485
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. PSD----EWA R EADVRPRAHE Site 4550
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ELQ----LKI E KDARNNSLPK Site 3337
Dictyostelium.discoideum.CDK10..Probable.cyclin.de PQS------- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d EGP----GTK Y LKSNSRSQQN Site 4181
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PSD-----EP I C----LHKFS Site 4796
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep CKE------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep EPE------- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac APP------- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. PEE------- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO EPL------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri RYH------- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha APP------- - -----PQIYD  
Saccharomyces.cerevisiae.CDK1 -ES------- - ----------  
Lodderomyces.elongisporus.IME2 AID-----KY H E----ISSSM Site 3583
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen PDD------- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un EPA------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar DGP------- - -----GTKYL  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. NTG------- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D PAE-----RK K E----PSSVE Site 4415
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U QRF----TPI R NTHAHGTHYN Site 4490
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d VGE------- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PLP------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep NPE------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro VDT------- - ----------  
Salmo.salar.CDK1 PMP------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d PTP------- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d HPS------- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi PVN------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PNV------- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable HPE----EEP L LVMVYSLLAI Site 4675
Aspergillus.fumigatus.IME2 KSS-----TS R L----LGRKQ Site 4512
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan LPT----SDV F AGCQIPYPKR Site 4805
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha QMA------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha IEE------- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S RFH------- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma QQA----LIV C PPGFQGLQAS Site 3615
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina PTD------- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d RIH------- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. EPE------- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ESE------- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S APA------- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. TEA-----EP Y D----QTFEG Site 4882
Candida.glabrata.IME2 EKD-----TN F E----NVPLD Site 3493
Homo.sapiens.MAK..Serine.threonine.protein.kinase. PLP----DII D QVVGQPQPKT Site 4583
Schizosaccharomyces.pombe.IME2 VAS-----KE E V----NKNTD Site 4623
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P PND------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl SNH------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom AHE----ATR Y YQLSLRGCRL Site 4668
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. QQA------- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d RVH------- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d DQM------- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara EPS------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH PNT------- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD TRN-----KP D L----LEKIH Site 3590
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR PDA------- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. IKP-----VP P A----QPPAK Site 4567
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos AME-----QS Q S----SGTTS Site 3748
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep PVP------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PPP----APL P CPGPAPDTID Site 4302
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. PDD------- - ----------  
Lachancea.thermotolerans.SKY1 LEG------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a PIS------- - -----SHPFH  
Dictyostelium.discoideum.CDK1 SFF------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. TED------- - ----------  
Xenopus.tropicalis.IME2 PTP------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U FQA------- - -----AGLQA  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. DQA------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d PTP----HLI - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara QST------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. QLY------- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD PHF-----DR I I----KISID Site 4873
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos EGT----NTS N SVSTSPAMEQ Site 3736
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen PNV------- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s LPN-----GR S L----PPLFN Site 4477
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD PSL------- - ----------  
Encephalitozoon.cuniculi.CDK1 IME------- - ----------  
Saccharomyces.kluyveri.IME2 MLN-----NS T D----STNAE Site 3880
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a PSD------- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. QLY------- - ----------  
Cryptococcus.neoformans.IME2 AAA-----DA R A----AQYAQ Site 4471
Homo.sapiens.HIPK4..Homeodomain.interacting.protei AHE----TTH Y YQLSLRSYRL Site 4668
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --S------- - ----------  
Candida.lusitaniae.IME2 LGK-----EM L N----LLPTP Site 4796
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom AFQ------- - -----TGLQA  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A VFA-----GC P I----PYPKR Site 4772
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep PAH------- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. DLE------- - ----------  
Gallus.gallus.CDK2 AVP------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. TEK----RAL G SHRKAGFPEH Site 4755
Homo.sapiens.CDK1 QIK-----KM - ----------  
Candida.albicans.CDK1 RDH------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca DQG------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PPP----ALP P CSDPAPDTVD Site 4277
Mus.musculus.ICK..Serine.threonine.protein.kinase. AQA----PAK A YTLISSRPSQ Site 4574
Saccharomyces.castelli.IME2 SES-----MK N S----NTKGE Site 3802
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ATR-----K- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep PTP------- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. RLW------- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly PAA------- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NTY------- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli PTP------- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho PSD------- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei QQA----LIV C PPGFQGLQAS Site 3613
Acyrthosiphon.pisum.CDK1 ETP------- - ----------  
Candida.tropicalis.CDK1 MMD------- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin PTQ------- D VFAGCPIPYP Site 4813
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G MPN-----GR E F----PLSLT Site 4798
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR EQG------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de RIH------- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d RIH------- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA IEE------- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki VNE-----NA F E----GLNYK Site 4818
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF MEK----RQY A LMNPKADGTL Site 4659
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA LPN------- - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara PEP-----TA Y D----DSYDN Site 4881
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de NPS-----EL Q S----YSASH Site 4404
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei DQS------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SYSVRVDNAL P LVTQAPAIQP Site 3595
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PID------- - ----------  
Candida.dubliniensis.IME2 MMD------- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a APP------- - -----PQIYD  
Aspergillus.niger.IME2 RPK----SST A RLLGRKQSDK Site 4505
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge PDD------- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d EAK-----VN S L----IKPKE Site 3417
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. RLW------- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein DQA------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QVP------- - ----------  
Schizosaccharomyces.japonicus.IME2 TTT-----AY L Q----KKTSR Site 4631
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. APP------- - -----PLPYD  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep CPP------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P PET------- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. PDA------- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. TED------- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ KFE------- - ----------  
Kluyveromyces.waltii.IME2 EQL-----GT E M----LVQHQ Site 3896
Debaryomyces.hansenii.SKY1 LEN------- - ----------  
Saccharomyces.cerevisiae.IME2 LIF----AGI N PVATNTKPIY Site 3901
Schizosaccharomyces.japonicus.b.IME2 IIE-----ST I S----PSSPA Site 3380
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un GKD------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein EQS------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a PIS------- - -----SHPFH  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep YKD------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST CDT------- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk IDD------- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de AKL----LQE A KVNSFIKPKE Site 3410
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act APP------- - ----------  
Candida.albicans.IME2 MMD------- - -----TYFET  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ACS------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k PRD------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. PVA------- - ----------  
Kluyveromyces.lactis.IME2 VQK-----NN Q M----NCVTD Site 3830
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PPP----APP P CPGPAPDTID Site 4267
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. APP------- - -----PQIYD  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. PED------- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. PDD------- - ----------  
Amphimedon.queenslandica.CDK1 --E------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d AQI------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PID------- - ----------  
Neurospora.crassa.IME2 KSS-----AS R I----LGRKQ Site 4496
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME SGH------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep DAE------- - ----------  
Hydra.magnipapillata.CDK1 NM-------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar EPE------- - ----------  
Ashbya.gossypii.IME2 QPP-----LS T A----QSALM Site 3473
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PGS------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos RPL------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p DDG------- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace PSS------- - ----------  
Schizosaccharomyces.pombe.b.IME2 ASK-----SN S V----PQKIS Site 4698
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a PSD------- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GDAFHQTLII C PPAIQGIPAA Site 3587
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 QIP------- - -----EHLPK  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas LPS-----TA S G----RLRGT Site 3267
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac APP------- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep LAP------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable SHP----NSE R LVNVVYNVLA Site 4661
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep SPA------- - ----------  
Yarrowia.lipolytica.IME2 DPP-----IL M D----PSLRH Site 3584
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil PVS-----EN V FEGLTYKYPA Site 4781
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli PVP------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K DLL------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly PST------- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk PNT------- - ----------  
Species Residue at Site 2251
in 'muscle'
msaprobs

The residue for every species at site 2251 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro QPP------- - -----VSHSN  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo RYH------- - ----------  
Scheffersomyces.stipitis.SKY1 LEN------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep CPP------- - ----------  

Generated by PhyloBot at 02:43, November 16th 2019
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