cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2250 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2250 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2250 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2250 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 EKVQ-----K P RK----EKET Site 4613
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD PFLN------ - ----------  
Danio.rerio.CDK1 MPVP------ - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge DISD------ - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d FCPP------ - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 KAME-----T S LF----KRSG Site 4803
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RMRA-----G E RT----SGAA Site 3081
Chlamydomonas.reinhardtii.LF4 RQKA-----L L AP----DVSN Site 4565
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g DPNC------ - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 PNEK-----S K RH----RSKN Site 3197
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho LPTS------ - ----------  
Schizosaccharomyces.octosporus.b.IME2 ESPN-----G Q QG----TKLG Site 4652
Candida.albicans.MAPK3..Extracellular.signal.regul DPND------ - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 DSLA-----V A LD----QQQE Site 3264
Suberites.domuncula.JNK..Stress.activated.protein. HAPP-----P K RY----DHAL Site 4894
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci KHT------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase AEPP------ - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos NLKP------ - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PAFQ------ - ------TGLQ  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar EAGD------ - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 AFNN------ - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. KEQS------ - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM DPGD------ - ----------  
Strongylocentrotus.purpuratus.CDK1 RLPT------ - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca KHQV-----G V AR----PINA Site 3266
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 RANN------ - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. QIQQ-----Q I QQ----QQQA Site 3242
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ERVH------ - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. PKLF----EL P DGMQVHFVLY Site 4555
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET EAPP------ - ------PQIY  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 KDAR-----N V SL----SKKS Site 3516
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U EAPP------ - ------PQIY  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. DPEE------ - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo LRYH------ - ----------  
Bombus.terrestris.CDK1 LVPP------ - ------PLPK  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---S------ - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar QELK-----L R IH----KEAR Site 3456
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. EAPP------ - ------PKIP  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d MAPPDLPHWQ D CHELWSKKRR Site 3644
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. QTLA-----K H RR----AFCP Site 4756
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. EPTT------ - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G DSAT------ - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ALPP-----G I SN----IDRY Site 2756
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VPPQ-----Q Y VN----VPVP Site 4243
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl LRYH------ - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 EIED------ - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TSYSIRVDNT V PLVTQAPAVQ Site 3590
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O LPID------ - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d NNLP-----H L LS----PKDA Site 4106
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci TEPP------ - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LPID------ - ----------  
Naegleria.gruberi.LF4 SFGG-----G Q SI----PSPS Site 4692
Saccharomyces.bayanus.IME2 NTEQALIFAG I NPLAAKNTKP Site 3899
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. KEQS------ - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ETEA-----P P YD----HSLD Site 4883
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki KHTN-----P A DL----PVPF Site 3984
Dictyostelium.discoideum.DYRK1..Probable.serine.th TSQP-----P Q QQ----SQQQ Site 3806
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos NTGP-----A G SSASTSPAPL Site 3824
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos PKPP-----T G EK----TSVK Site 3952
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d DTKP-----S E GP----GTKY Site 4267
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a EWAR-----E S DV----RLPV Site 4548
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific QPAP------ - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos KFKP----RP K PQILRKPGAS Site 3902
Aspergillus.nidulans.IME2 DPLS----VR P RSSTARLLGR Site 4503
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi DMCS------ - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LRFH------ - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. PKPS-----S S ER----DPKP Site 4572
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep KPVP------ - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. EAPP------ - ------PQIY  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. DPNS------ - ----------  
Penicillium.marneffei.IME2 KMSE-----K S FK----PAPT Site 4509
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen DPDD------ - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a EPTS------ - ------QHPF  
Drosophila.melanogaster.MAK TAAT-----K A NV----RLNS Site 4469
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --KK------ - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -EKI------ - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de MAPPDLPHWQ D CHELWSKKRR Site 3646
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep NAFS------ - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d CEPE------ - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin EAPP------ - ------PQIY  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a EAPP------ - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---L------ - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis DMSL------ - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p LWTT------ - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen CLGT------ - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. EAPP------ - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki KDQA------ - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U K--------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a EPTS------ - ------QHPF  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ERIH------ - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. KDQA------ - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein KVSQ------ - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. DADE------ - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos EATN----TG P AGSSASTSPA Site 3822
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE EAHA------ - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH DERT------ - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD CLPD-----G K PL----PPLF Site 4763
Candida.orthopsilosis.IME2 ---K------ - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot GPTP------ - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str SCSS------ - ----------  
Debaryomyces.hansenii.IME2 PSNK-----M T RP----SPLK Site 3547
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati DPNT------ - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin PPVS-----S D VFEGLSYKYP Site 4766
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE FTQN-----R P SV----AKLK Site 4893
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO NGQM------ - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de AHPS------ - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos PKPL------ - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. KCKE------ - ----------  
Monosiga.brevicollis.CDK1 KKAL------ - ----------  
Saccharomyces.cerevisiae.SKY1 GMEE------ - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP DPND------ - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U FADK------ - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg TLPN-----G R DM----PPLF Site 4484
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. CPSD----EW A READVRPRAH Site 4549
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d QELQ----LK I EKDARNNSLP Site 3336
Dictyostelium.discoideum.CDK10..Probable.cyclin.de FPQS------ - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d SEGP----GT K YLKSNSRSQQ Site 4180
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa DPSD-----E P IC----LHKF Site 4795
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep RCKE------ - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep CEPE------ - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac EAPP------ - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. DPEE------ - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO QEPL------ - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LRYH------ - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha EAPP------ - ------PQIY  
Saccharomyces.cerevisiae.CDK1 --ES------ - ----------  
Lodderomyces.elongisporus.IME2 HAID-----K Y HE----ISSS Site 3582
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen DPDD------ - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un GEPA------ - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar SDGP------ - ------GTKY  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. SNTG------ - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D SPAE-----R K KE----PSSV Site 4414
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U AQRF----TP I RNTHAHGTHY Site 4489
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d EVGE------ - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen RPLP------ - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep GNPE------ - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GVDT------ - ----------  
Salmo.salar.CDK1 MPMP------ - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d APTP------ - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d AHPS------ - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi HPVN------ - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen DPNV------ - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SHPE----EE P LLVMVYSLLA Site 4674
Aspergillus.fumigatus.IME2 PKSS-----T S RL----LGRK Site 4511
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan PLPT----SD V FAGCQIPYPK Site 4804
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha PQMA------ - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha DIEE------ - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LRFH------ - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma FQQA----LI V CPPGFQGLQA Site 3614
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina DPTD------ - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d PRIH------ - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. CEPE------ - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de EESE------ - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S DAPA------ - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ETEA-----E P YD----QTFE Site 4881
Candida.glabrata.IME2 REKD-----T N FE----NVPL Site 3492
Homo.sapiens.MAK..Serine.threonine.protein.kinase. KPLP----DI I DQVVGQPQPK Site 4582
Schizosaccharomyces.pombe.IME2 AVAS-----K E EV----NKNT Site 4622
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P DPND------ - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl SSNH------ - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom SAHE----AT R YYQLSLRGCR Site 4667
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. GQQA------ - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d DRVH------ - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d EDQM------ - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara MEPS------ - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH DPNT------ - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD FTRN-----K P DL----LEKI Site 3589
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR SPDA------ - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. YIKP-----V P PA----QPPA Site 4566
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos PAME-----Q S QS----SGTT Site 3747
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep KPVP------ - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act SPPP----AP L PCPGPAPDTI Site 4301
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. DPDD------ - ----------  
Lachancea.thermotolerans.SKY1 GLEG------ - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a EPIS------ - ------SHPF  
Dictyostelium.discoideum.CDK1 TSFF------ - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. DTED------ - ----------  
Xenopus.tropicalis.IME2 RPTP------ - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U AFQA------ - ------AGLQ  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. KDQA------ - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d RPTP----HL I ---------- Site 4923
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara PQST------ - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. SQLY------ - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD EPHF-----D R II----KISI Site 4872
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos DEGT----NT S NSVSTSPAME Site 3735
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen DPNV------ - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s QLPN-----G R SL----PPLF Site 4476
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD LPSL------ - ----------  
Encephalitozoon.cuniculi.CDK1 LIME------ - ----------  
Saccharomyces.kluyveri.IME2 YMLN-----N S TD----STNA Site 3879
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a DPSD------ - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. SQLY------ - ----------  
Cryptococcus.neoformans.IME2 AAAA-----D A RA----AQYA Site 4470
Homo.sapiens.HIPK4..Homeodomain.interacting.protei SAHE----TT H YYQLSLRSYR Site 4667
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---S------ - ----------  
Candida.lusitaniae.IME2 TLGK-----E M LN----LLPT Site 4795
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PAFQ------ - ------TGLQ  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A DVFA-----G C PI----PYPK Site 4771
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep LPAH------ - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. EDLE------ - ----------  
Gallus.gallus.CDK2 RAVP------ - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. KTEK----RA L GSHRKAGFPE Site 4754
Homo.sapiens.CDK1 NQIK-----K M ---------- Site 4923
Candida.albicans.CDK1 DRDH------ - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca KDQG------ - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a SPPP----AL P PCSDPAPDTV Site 4276
Mus.musculus.ICK..Serine.threonine.protein.kinase. PAQA----PA K AYTLISSRPS Site 4573
Saccharomyces.castelli.IME2 ASES-----M K NS----NTKG Site 3801
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec KATR-----K - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep GPTP------ - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. PRLW------ - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly DPAA------ - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ENTY------ - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli GPTP------ - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho MPSD------ - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei FQQA----LI V CPPGFQGLQA Site 3612
Acyrthosiphon.pisum.CDK1 PETP------ - ----------  
Candida.tropicalis.CDK1 KMMD------ - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QPTQ------ - DVFAGCPIPY  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G RMPN-----G R EF----PLSL Site 4797
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR KEQG------ - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ERIH------ - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d PRIH------ - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA DIEE------ - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki KVNE-----N A FE----GLNY Site 4817
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF EMEK----RQ Y ALMNPKADGT Site 4658
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA KLPN------ - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara WPEP-----T A YD----DSYD Site 4880
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ANPS-----E L QS----YSAS Site 4403
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei KDQS------ - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TSYSVRVDNA L PLVTQAPAIQ Site 3594
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d LPID------ - ----------  
Candida.dubliniensis.IME2 AMMD------ - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a EAPP------ - ------PQIY  
Aspergillus.niger.IME2 LRPK----SS T ARLLGRKQSD Site 4504
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge DPDD------ - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d QEAK-----V N SL----IKPK Site 3416
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. PRLW------ - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein KDQA------ - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty DQVP------ - ----------  
Schizosaccharomyces.japonicus.IME2 STTT-----A Y LQ----KKTS Site 4630
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. YAPP------ - ------PLPY  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep FCPP------ - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P DPET------ - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. NPDA------ - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. DTED------ - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ TKFE------ - ----------  
Kluyveromyces.waltii.IME2 GEQL-----G T EM----LVQH Site 3895
Debaryomyces.hansenii.SKY1 GLEN------ - ----------  
Saccharomyces.cerevisiae.IME2 ALIF----AG I NPVATNTKPI Site 3900
Schizosaccharomyces.japonicus.b.IME2 EIIE-----S T IS----PSSP Site 3379
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un KGKD------ - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein KEQS------ - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a EPIS------ - ------SHPF  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep RYKD------ - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST RCDT------ - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk DIDD------ - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de RAKL----LQ E AKVNSFIKPK Site 3409
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EAPP------ - ----------  
Candida.albicans.IME2 TMMD------ - ------TYFE  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d QACS------ - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k QPRD------ - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. EPVA------ - ----------  
Kluyveromyces.lactis.IME2 KVQK-----N N QM----NCVT Site 3829
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina SPPP----AP P PCPGPAPDTI Site 4266
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. EAPP------ - ------PQIY  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. DPED------ - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. DPDD------ - ----------  
Amphimedon.queenslandica.CDK1 ---E------ - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d EAQI------ - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME LPID------ - ----------  
Neurospora.crassa.IME2 PKSS-----A S RI----LGRK Site 4495
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME SSGH------ - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep SDAE------ - ----------  
Hydra.magnipapillata.CDK1 HNM------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar CEPE------ - ----------  
Ashbya.gossypii.IME2 KQPP-----L S TA----QSAL Site 3472
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi HPGS------ - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos PRPL------ - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LDDG------ - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace NPSS------ - ----------  
Schizosaccharomyces.pombe.b.IME2 SASK-----S N SV----PQKI Site 4697
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a DPSD------ - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom CGDAFHQTLI I CPPAIQGIPA Site 3586
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 VQIP------ - ------EHLP  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas GLPS-----T A SG----RLRG Site 3266
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EAPP------ - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep SLAP------ - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable RSHP----NS E RLVNVVYNVL Site 4660
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep PSPA------ - ----------  
Yarrowia.lipolytica.IME2 GDPP-----I L MD----PSLR Site 3583
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil IPVS-----E N VFEGLTYKYP Site 4780
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli MPVP------ - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K EDLL------ - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly DPST------ - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk DPNT------ - ----------  
Species Residue at Site 2250
in 'muscle'
msaprobs

The residue for every species at site 2250 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro SQPP------ - ------VSHS  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo LRYH------ - ----------  
Scheffersomyces.stipitis.SKY1 GLEN------ - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep FCPP------ - ----------  

Generated by PhyloBot at 01:20, November 28th 2020
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