cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2249 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2249 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2249 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2249 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 EEKVQ----- K PRK----EKE Site 4612
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD PPFLN----- - ----------  
Danio.rerio.CDK1 TMPVP----- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge HDISD----- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d DFCPP----- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 KKAME----- T SLF----KRS Site 4802
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ PRMRA----- G ERT----SGA Site 3080
Chlamydomonas.reinhardtii.LF4 KRQKA----- L LAP----DVS Site 4564
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RDPNC----- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 PPNEK----- S KRH----RSK Site 3196
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PLPTS----- - ----------  
Schizosaccharomyces.octosporus.b.IME2 PESPN----- G QQG----TKL Site 4651
Candida.albicans.MAPK3..Extracellular.signal.regul HDPND----- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 DDSLA----- V ALD----QQQ Site 3263
Suberites.domuncula.JNK..Stress.activated.protein. VHAPP----- P KRY----DHA Site 4893
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci KKHT------ - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase RAEPP----- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos RNLKP----- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PPAFQ----- - -------TGL  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar REAGD----- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 VAFNN----- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. VKEQS----- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM YDPGD----- - ----------  
Strongylocentrotus.purpuratus.CDK1 PRLPT----- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca DKHQV----- G VAR----PIN Site 3265
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 NRANN----- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. KQIQQ----- Q IQQ----QQQ Site 3241
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d GERVH----- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. PPKLF----E L PDGMQVHFVL Site 4554
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VEAPP----- - -------PQI  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 QKDAR----- N VSL----SKK Site 3515
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VEAPP----- - -------PQI  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. RDPEE----- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo RLRYH----- - ----------  
Bombus.terrestris.CDK1 TLVPP----- - -------PLP  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ----S----- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar AQELK----- L RIH----KEA Site 3455
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. AEAPP----- - -------PKI  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d KMAPPDLPHW Q DCHELWSKKR Site 3643
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. TQTLA----- K HRR----AFC Site 4755
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. REPTT----- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G HDSAT----- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 AALPP----- G ISN----IDR Site 2755
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QVPPQ----- Q YVN----VPV Site 4242
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl RLRYH----- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 REIED----- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PTSYSIRVDN T VPLVTQAPAV Site 3589
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PLPID----- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d NNNLP----- H LLS----PKD Site 4105
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci RTEPP----- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PLPID----- - ----------  
Naegleria.gruberi.LF4 QSFGG----- G QSI----PSP Site 4691
Saccharomyces.bayanus.IME2 TNTEQALIFA G INPLAAKNTK Site 3898
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. VKEQS----- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a EETEA----- P PYD----HSL Site 4882
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki VKHTN----- P ADL----PVP Site 3983
Dictyostelium.discoideum.DYRK1..Probable.serine.th ETSQP----- P QQQ----SQQ Site 3805
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos TNTGP----- A GSSASTSPAP Site 3823
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos LPKPP----- T GEK----TSV Site 3951
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d IDTKP----- S EGP----GTK Site 4266
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a REWAR----- E SDV----RLP Site 4547
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific PQPAP----- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos RKFKP----R P KPQILRKPGA Site 3901
Aspergillus.nidulans.IME2 VDPLS----V R PRSSTARLLG Site 4502
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -DMCS----- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se RLRFH----- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. EPKPS----- S SER----DPK Site 4571
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep TKPVP----- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VEAPP----- - -------PQI  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. RDPNS----- - ----------  
Penicillium.marneffei.IME2 RKMSE----- K SFK----PAP Site 4508
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen HDPDD----- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DEPTS----- - -------QHP  
Drosophila.melanogaster.MAK PTAAT----- K ANV----RLN Site 4468
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---KK----- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --EKI----- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de KMAPPDLPHW Q DCHELWSKKR Site 3645
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep PNAFS----- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d PCEPE----- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VEAPP----- - -------PQI  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a AEAPP----- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ----L----- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -DMSL----- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p KLWTT----- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen RCLGT----- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. AEAPP----- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki VKDQA----- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U NK-------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a DEPTS----- - -------QHP  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d GERIH----- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. VKDQA----- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein PKVSQ----- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. HDADE----- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos DEATN----T G PAGSSASTSP Site 3821
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE VEAHA----- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH RDERT----- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD TCLPD----- G KPL----PPL Site 4762
Candida.orthopsilosis.IME2 ----K----- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot PGPTP----- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str GSCSS----- - ----------  
Debaryomyces.hansenii.IME2 RPSNK----- M TRP----SPL Site 3546
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati RDPNT----- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin DPPVS----- S DVFEGLSYKY Site 4765
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE EFTQN----- R PSV----AKL Site 4892
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO VNGQM----- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PAHPS----- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos TPKPL----- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. EKCKE----- - ----------  
Monosiga.brevicollis.CDK1 DKKAL----- - ----------  
Saccharomyces.cerevisiae.SKY1 LGMEE----- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP HDPND----- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U GFADK----- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg HTLPN----- G RDM----PPL Site 4483
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. HCPSD----E W AREADVRPRA Site 4548
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d SQELQ----L K IEKDARNNSL Site 3335
Dictyostelium.discoideum.CDK10..Probable.cyclin.de PFPQS----- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d PSEGP----G T KYLKSNSRSQ Site 4179
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa HDPSD----- E PIC----LHK Site 4794
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ERCKE----- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep PCEPE----- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac AEAPP----- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. RDPEE----- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -QEPL----- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri RLRYH----- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VEAPP----- - -------PQI  
Saccharomyces.cerevisiae.CDK1 ---ES----- - ----------  
Lodderomyces.elongisporus.IME2 VHAID----- K YHE----ISS Site 3581
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen HDPDD----- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un KGEPA----- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar SSDGP----- - -------GTK  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. VSNTG----- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TSPAE----- R KKE----PSS Site 4413
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U PAQRF----T P IRNTHAHGTH Site 4488
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d REVGE----- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen DRPLP----- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep EGNPE----- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GGVDT----- - ----------  
Salmo.salar.CDK1 TMPMP----- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d PAPTP----- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PAHPS----- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi THPVN----- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RDPNV----- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable QSHPE----E E PLLVMVYSLL Site 4673
Aspergillus.fumigatus.IME2 RPKSS----- T SRL----LGR Site 4510
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan EPLPT----S D VFAGCQIPYP Site 4803
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha NPQMA----- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha RDIEE----- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S RLRFH----- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PFQQA----L I VCPPGFQGLQ Site 3613
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina YDPTD----- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d GPRIH----- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. PCEPE----- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de REESE----- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S VDAPA----- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. EETEA----- E PYD----QTF Site 4880
Candida.glabrata.IME2 DREKD----- T NFE----NVP Site 3491
Homo.sapiens.MAK..Serine.threonine.protein.kinase. PKPLP----D I IDQVVGQPQP Site 4581
Schizosaccharomyces.pombe.IME2 DAVAS----- K EEV----NKN Site 4621
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P HDPND----- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl DSSNH----- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom RSAHE----A T RYYQLSLRGC Site 4666
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. QGQQA----- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d GDRVH----- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d QEDQM----- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara EMEPS----- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RDPNT----- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD DFTRN----- K PDL----LEK Site 3588
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR RSPDA----- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PYIKP----- V PPA----QPP Site 4565
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos SPAME----- Q SQS----SGT Site 3746
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep TKPVP----- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ESPPP----A P LPCPGPAPDT Site 4300
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. HDPDD----- - ----------  
Lachancea.thermotolerans.SKY1 VGLEG----- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a DEPIS----- - -------SHP  
Dictyostelium.discoideum.CDK1 DTSFF----- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RDTED----- - ----------  
Xenopus.tropicalis.IME2 SRPTP----- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PAFQA----- - -------AGL  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. VKDQA----- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d SRPTP----H L I--------- Site 4922
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara SPQST----- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. PSQLY----- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD EEPHF----- D RII----KIS Site 4871
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ADEGT----N T SNSVSTSPAM Site 3734
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RDPNV----- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s QQLPN----- G RSL----PPL Site 4475
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD PLPSL----- - ----------  
Encephalitozoon.cuniculi.CDK1 PLIME----- - ----------  
Saccharomyces.kluyveri.IME2 NYMLN----- N STD----STN Site 3878
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a YDPSD----- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. PSQLY----- - ----------  
Cryptococcus.neoformans.IME2 EAAAA----- D ARA----AQY Site 4469
Homo.sapiens.HIPK4..Homeodomain.interacting.protei RSAHE----T T HYYQLSLRSY Site 4666
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ----S----- - ----------  
Candida.lusitaniae.IME2 NTLGK----- E MLN----LLP Site 4794
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PPAFQ----- - -------TGL  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ADVFA----- G CPI----PYP Site 4770
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep PLPAH----- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. REDLE----- - ----------  
Gallus.gallus.CDK2 TRAVP----- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. RKTEK----R A LGSHRKAGFP Site 4753
Homo.sapiens.CDK1 DNQIK----- K M--------- Site 4922
Candida.albicans.CDK1 DDRDH----- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca VKDQG----- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ESPPP----A L PPCSDPAPDT Site 4275
Mus.musculus.ICK..Serine.threonine.protein.kinase. PPAQA----P A KAYTLISSRP Site 4572
Saccharomyces.castelli.IME2 VASES----- M KNS----NTK Site 3800
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec RKATR----- K ---------- Site 4923
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep PGPTP----- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. PPRLW----- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly RDPAA----- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NENTY----- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli PGPTP----- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho PMPSD----- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PFQQA----L I VCPPGFQGLQ Site 3611
Acyrthosiphon.pisum.CDK1 LPETP----- - ----------  
Candida.tropicalis.CDK1 IKMMD----- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin PQPTQ----- - -DVFAGCPIP  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ARMPN----- G REF----PLS Site 4796
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR VKEQG----- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de GERIH----- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d GPRIH----- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA RDIEE----- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki PKVNE----- N AFE----GLN Site 4816
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF REMEK----R Q YALMNPKADG Site 4657
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA IKLPN----- - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara DWPEP----- T AYD----DSY Site 4879
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de PANPS----- E LQS----YSA Site 4402
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei VKDQS----- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PTSYSVRVDN A LPLVTQAPAI Site 3593
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PLPID----- - ----------  
Candida.dubliniensis.IME2 IAMMD----- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a AEAPP----- - -------PQI  
Aspergillus.niger.IME2 PLRPK----S S TARLLGRKQS Site 4503
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge HDPDD----- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d LQEAK----- V NSL----IKP Site 3415
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. PPRLW----- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein VKDQA----- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty IDQVP----- - ----------  
Schizosaccharomyces.japonicus.IME2 HSTTT----- A YLQ----KKT Site 4629
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. VYAPP----- - -------PLP  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep DFCPP----- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RDPET----- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. RNPDA----- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. HDTED----- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -TKFE----- - ----------  
Kluyveromyces.waltii.IME2 GGEQL----- G TEM----LVQ Site 3894
Debaryomyces.hansenii.SKY1 LGLEN----- - ----------  
Saccharomyces.cerevisiae.IME2 QALIF----A G INPVATNTKP Site 3899
Schizosaccharomyces.japonicus.b.IME2 NEIIE----- S TIS----PSS Site 3378
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un QKGKD----- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein VKEQS----- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a DEPIS----- - -------SHP  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ERYKD----- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST KRCDT----- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk HDIDD----- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de LRAKL----L Q EAKVNSFIKP Site 3408
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act VEAPP----- - ----------  
Candida.albicans.IME2 ITMMD----- - -------TYF  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d PQACS----- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k PQPRD----- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. DEPVA----- - ----------  
Kluyveromyces.lactis.IME2 PKVQK----- N NQM----NCV Site 3828
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ESPPP----A P PPCPGPAPDT Site 4265
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VEAPP----- - -------PQI  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. HDPED----- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. HDPDD----- - ----------  
Amphimedon.queenslandica.CDK1 ----E----- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d QEAQI----- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME PLPID----- - ----------  
Neurospora.crassa.IME2 RPKSS----- A SRI----LGR Site 4494
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME SSSGH----- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ESDAE----- - ----------  
Hydra.magnipapillata.CDK1 NHNM------ - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar PCEPE----- - ----------  
Ashbya.gossypii.IME2 TKQPP----- L STA----QSA Site 3471
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PHPGS----- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos VPRPL----- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p KLDDG----- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace HNPSS----- - ----------  
Schizosaccharomyces.pombe.b.IME2 PSASK----- S NSV----PQK Site 4696
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a YDPSD----- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GCGDAFHQTL I ICPPAIQGIP Site 3585
Schizosaccharomyces.pombe.CDK1 H--------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 QVQIP----- - -------EHL  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas RGLPS----- T ASG----RLR Site 3265
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac AEAPP----- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep HSLAP----- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable LRSHP----N S ERLVNVVYNV Site 4659
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep EPSPA----- - ----------  
Yarrowia.lipolytica.IME2 HGDPP----- I LMD----PSL Site 3582
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil DIPVS----- E NVFEGLTYKY Site 4779
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli TMPVP----- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K NEDLL----- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RDPST----- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RDPNT----- - ----------  
Species Residue at Site 2249
in 'muscle'
msaprobs

The residue for every species at site 2249 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro PSQPP----- - -------VSH  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo RLRYH----- - ----------  
Scheffersomyces.stipitis.SKY1 LGLEN----- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep DFCPP----- - ----------  

Generated by PhyloBot at 02:49, November 28th 2020
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