cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2248 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2248 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2248 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2248 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 KEEKVQ---- - KPRK----EK  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD VPPFLN---- - ----------  
Danio.rerio.CDK1 VTMPVP---- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge LHDISD---- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -DFCPP---- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 EKKAME---- - TSLF----KR  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ NPRMRA---- - GERT----SG  
Chlamydomonas.reinhardtii.LF4 EKRQKA---- - LLAP----DV  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LRDPNC---- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NPPNEK---- - SKRH----RS  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho DPLPTS---- - ----------  
Schizosaccharomyces.octosporus.b.IME2 PPESPN---- - GQQG----TK  
Candida.albicans.MAPK3..Extracellular.signal.regul YHDPND---- - ----------  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 RDDSLA---- - VALD----QQ  
Suberites.domuncula.JNK..Stress.activated.protein. EVHAPP---- - PKRY----DH  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci LKKHT----- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase LRAEPP---- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos SRNLKP---- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei CPPAFQ---- - --------TG  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar VREAGD---- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 FVAFNN---- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. VVKEQS---- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM YYDPGD---- - ----------  
Strongylocentrotus.purpuratus.CDK1 PPRLPT---- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca VDKHQV---- - GVAR----PI  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ANRANN---- - ----------  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. NKQIQQ---- - QIQQ----QQ  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LGERVH---- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LPPKLF---- E LPDGMQVHFV Site 4553
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET EVEAPP---- - --------PQ  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 VQKDAR---- - NVSL----SK  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U EVEAPP---- - --------PQ  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. FRDPEE---- - ----------  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo GRLRYH---- - ----------  
Bombus.terrestris.CDK1 VTLVPP---- - --------PL  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -----S---- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar FAQELK---- - LRIH----KE  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. EAEAPP---- - --------PK  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SKMAPPDLPH W QDCHELWSKK Site 3642
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ETQTLA---- - KHRR----AF  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. LREPTT---- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G LHDSAT---- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 SAALPP---- - GISN----ID  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO LQVPPQ---- - QYVN----VP  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl GRLRYH---- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 IREIED---- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei KPTSYSIRVD N TVPLVTQAPA Site 3588
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O TPLPID---- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ANNNLP---- - HLLS----PK  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci LRTEPP---- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O TPLPID---- - ----------  
Naegleria.gruberi.LF4 DQSFGG---- - GQSI----PS  
Saccharomyces.bayanus.IME2 VTNTEQALIF A GINPLAAKNT Site 3897
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. VVKEQS---- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a EEETEA---- - PPYD----HS  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki GVKHTN---- - PADL----PV  
Dictyostelium.discoideum.DYRK1..Probable.serine.th DETSQP---- - PQQQ----SQ  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ATNTGP---- - AGSSASTSPA  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos RLPKPP---- - TGEK----TS  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d NIDTKP---- - SEGP----GT  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a DREWAR---- - ESDV----RL  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific QPQPAP---- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos PRKFKP---- R PKPQILRKPG Site 3900
Aspergillus.nidulans.IME2 AVDPLS---- V RPRSSTARLL Site 4501
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --DMCS---- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se GRLRFH---- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. LEPKPS---- - SSER----DP  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep VTKPVP---- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. EVEAPP---- - --------PQ  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. LRDPNS---- - ----------  
Penicillium.marneffei.IME2 GRKMSE---- - KSFK----PA  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen YHDPDD---- - ----------  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a EDEPTS---- - --------QH  
Drosophila.melanogaster.MAK SPTAAT---- - KANV----RL  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ----KK---- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---EKI---- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SKMAPPDLPH W QDCHELWSKK Site 3644
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep LPNAFS---- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d LPCEPE---- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin EVEAPP---- - --------PQ  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a EAEAPP---- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -----L---- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --DMSL---- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p DKLWTT---- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LRCLGT---- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. EAEAPP---- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki VVKDQA---- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U LNK------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a EDEPTS---- - --------QH  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d LGERIH---- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. VVKDQA---- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein APKVSQ---- - ----------  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. FHDADE---- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ADEATN---- T GPAGSSASTS Site 3820
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE VVEAHA---- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH LRDERT---- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD KTCLPD---- - GKPL----PP  
Candida.orthopsilosis.IME2 -----K---- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot RPGPTP---- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str RGSCSS---- - ----------  
Debaryomyces.hansenii.IME2 ERPSNK---- - MTRP----SP  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati LRDPNT---- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin NDPPVS---- - SDVFEGLSYK  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE NEFTQN---- - RPSV----AK  
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO IVNGQM---- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de LPAHPS---- - ----------  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos STPKPL---- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. LEKCKE---- - ----------  
Monosiga.brevicollis.CDK1 IDKKAL---- - ----------  
Saccharomyces.cerevisiae.SKY1 TLGMEE---- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP YHDPND---- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U DGFADK---- - ----------  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg NHTLPN---- - GRDM----PP  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. FHCPSD---- E WAREADVRPR Site 4547
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d FSQELQ---- L KIEKDARNNS Site 3334
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NPFPQS---- - ----------  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d KPSEGP---- G TKYLKSNSRS Site 4178
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa LHDPSD---- - EPIC----LH  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep LERCKE---- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep LPCEPE---- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac EAEAPP---- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. FRDPEE---- - ----------  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --QEPL---- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GRLRYH---- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha EVEAPP---- - --------PQ  
Saccharomyces.cerevisiae.CDK1 ----ES---- - ----------  
Lodderomyces.elongisporus.IME2 SVHAID---- - KYHE----IS  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen YHDPDD---- - ----------  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un FKGEPA---- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar KSSDGP---- - --------GT  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. IVSNTG---- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TTSPAE---- - RKKE----PS  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U LPAQRF---- T PIRNTHAHGT Site 4487
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d IREVGE---- - ----------  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen NDRPLP---- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep DEGNPE---- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro EGGVDT---- - ----------  
Salmo.salar.CDK1 VTMPMP---- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d RPAPTP---- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d LPAHPS---- - ----------  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi QTHPVN---- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen LRDPNV---- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LQSHPE---- E EPLLVMVYSL Site 4672
Aspergillus.fumigatus.IME2 LRPKSS---- - TSRL----LG  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan EEPLPT---- S DVFAGCQIPY Site 4802
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha LNPQMA---- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha FRDIEE---- - ----------  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S GRLRFH---- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma DPFQQA---- L IVCPPGFQGL Site 3612
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina YYDPTD---- - ----------  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d LGPRIH---- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. LPCEPE---- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de LREESE---- - ----------  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EVDAPA---- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. LEETEA---- - EPYD----QT  
Candida.glabrata.IME2 NDREKD---- - TNFE----NV  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. EPKPLP---- D IIDQVVGQPQ Site 4580
Schizosaccharomyces.pombe.IME2 ADAVAS---- - KEEV----NK  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P YHDPND---- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -DSSNH---- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom LRSAHE---- A TRYYQLSLRG Site 4665
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. GQGQQA---- - ----------  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LGDRVH---- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d FQEDQM---- - ----------  
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara LEMEPS---- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LRDPNT---- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD DDFTRN---- - KPDL----LE  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR LRSPDA---- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PPYIKP---- - VPPA----QP  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos TSPAME---- - QSQS----SG  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep VTKPVP---- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act MESPPP---- A PLPCPGPAPD Site 4299
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. YHDPDD---- - ----------  
Lachancea.thermotolerans.SKY1 TVGLEG---- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a TDEPIS---- - --------SH  
Dictyostelium.discoideum.CDK1 LDTSFF---- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. LRDTED---- - ----------  
Xenopus.tropicalis.IME2 VSRPTP---- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PPAFQA---- - --------AG  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. IVKDQA---- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d VSRPTP---- H LI-------- Site 4921
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara KSPQST---- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LPSQLY---- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD AEEPHF---- - DRII----KI  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos TADEGT---- N TSNSVSTSPA Site 3733
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen LRDPNV---- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s HQQLPN---- - GRSL----PP  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD APLPSL---- - ----------  
Encephalitozoon.cuniculi.CDK1 MPLIME---- - ----------  
Saccharomyces.kluyveri.IME2 DNYMLN---- - NSTD----ST  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a YYDPSD---- - ----------  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LPSQLY---- - ----------  
Cryptococcus.neoformans.IME2 PEAAAA---- - DARA----AQ  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei LRSAHE---- T THYYQLSLRS Site 4665
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -----S---- - ----------  
Candida.lusitaniae.IME2 YNTLGK---- - EMLN----LL  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom CPPAFQ---- - --------TG  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A TADVFA---- - GCPI----PY  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep DPLPAH---- - ----------  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. CREDLE---- - ----------  
Gallus.gallus.CDK2 VTRAVP---- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. QRKTEK---- R ALGSHRKAGF Site 4752
Homo.sapiens.CDK1 LDNQIK---- - KM--------  
Candida.albicans.CDK1 NDDRDH---- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca IVKDQG---- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a MESPPP---- A LPPCSDPAPD Site 4274
Mus.musculus.ICK..Serine.threonine.protein.kinase. APPAQA---- P AKAYTLISSR Site 4571
Saccharomyces.castelli.IME2 TVASES---- - MKNS----NT  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec LRKATR---- - K---------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep RPGPTP---- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. LPPRLW---- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly LRDPAA---- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS LNENTY---- - ----------  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli RPGPTP---- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho DPMPSD---- - ----------  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei DPFQQA---- L IVCPPGFQGL Site 3610
Acyrthosiphon.pisum.CDK1 SLPETP---- - ----------  
Candida.tropicalis.CDK1 TIKMMD---- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin EPQPTQ---- - --DVFAGCPI  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G GARMPN---- - GREF----PL  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR IVKEQG---- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LGERIH---- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d LGPRIH---- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA FRDIEE---- - ----------  
Candida.albicans.SSN3..Serine.threonine.protein.ki LPKVNE---- - NAFE----GL  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF IREMEK---- R QYALMNPKAD Site 4656
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA GIKLPN---- - ----------  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara DDWPEP---- - TAYD----DS  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de YPANPS---- - ELQS----YS  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei IVKDQS---- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U KPTSYSVRVD N ALPLVTQAPA Site 3592
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d TPLPID---- - ----------  
Candida.dubliniensis.IME2 SIAMMD---- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a EAEAPP---- - --------PQ  
Aspergillus.niger.IME2 DPLRPK---- S STARLLGRKQ Site 4502
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge YHDPDD---- - ----------  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d LLQEAK---- - VNSL----IK  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. LPPRLW---- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein VVKDQA---- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty QIDQVP---- - ----------  
Schizosaccharomyces.japonicus.IME2 NHSTTT---- - AYLQ----KK  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. EVYAPP---- - --------PL  
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -DFCPP---- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P LRDPET---- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. LRNPDA---- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. LHDTED---- - ----------  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --TKFE---- - ----------  
Kluyveromyces.waltii.IME2 TGGEQL---- - GTEM----LV  
Debaryomyces.hansenii.SKY1 ALGLEN---- - ----------  
Saccharomyces.cerevisiae.IME2 EQALIF---- A GINPVATNTK Site 3898
Schizosaccharomyces.japonicus.b.IME2 GNEIIE---- - STIS----PS  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un LQKGKD---- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein VVKEQS---- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a MDEPIS---- - --------SH  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep LERYKD---- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST TKRCDT---- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk FHDIDD---- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ELRAKL---- L QEAKVNSFIK Site 3407
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EVEAPP---- - ----------  
Candida.albicans.IME2 SITMMD---- - --------TY  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d DPQACS---- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k NPQPRD---- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. DDEPVA---- - ----------  
Kluyveromyces.lactis.IME2 LPKVQK---- - NNQM----NC  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina MESPPP---- A PPPCPGPAPD Site 4264
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. EVEAPP---- - --------PQ  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. YHDPED---- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. YHDPDD---- - ----------  
Amphimedon.queenslandica.CDK1 -----E---- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d FQEAQI---- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME LPLPID---- - ----------  
Neurospora.crassa.IME2 LRPKSS---- - ASRI----LG  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME SSSSGH---- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep EESDAE---- - ----------  
Hydra.magnipapillata.CDK1 LNHNM----- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar LPCEPE---- - ----------  
Ashbya.gossypii.IME2 ETKQPP---- - LSTA----QS  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi QPHPGS---- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos SVPRPL---- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LKLDDG---- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace FHNPSS---- - ----------  
Schizosaccharomyces.pombe.b.IME2 PPSASK---- - SNSV----PQ  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a YYDPSD---- - ----------  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom FGCGDAFHQT L IICPPAIQGI Site 3584
Schizosaccharomyces.pombe.CDK1 FH-------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 VQVQIP---- - --------EH  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas TRGLPS---- - TASG----RL  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EAEAPP---- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep GHSLAP---- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable TLRSHP---- N SERLVNVVYN Site 4658
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep PEPSPA---- - ----------  
Yarrowia.lipolytica.IME2 PHGDPP---- - ILMD----PS  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil SDIPVS---- - ENVFEGLTYK  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli VTMPVP---- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K LNEDLL---- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly LRDPST---- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LRDPNT---- - ----------  
Species Residue at Site 2248
in 'muscle'
msaprobs

The residue for every species at site 2248 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro VPSQPP---- - --------VS  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo GRLRYH---- - ----------  
Scheffersomyces.stipitis.SKY1 ALGLEN---- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -DFCPP---- - ----------  

Generated by PhyloBot at 14:38, March 2nd 2021
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