cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2242 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2242 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2242 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2242 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 -----AKEEK V Q-----KPRK Site 4610
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -----DVPPF L N--------- Site 4922
Danio.rerio.CDK1 -----DVTMP V P--------- Site 4918
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -----SLHDI S D--------- Site 4883
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -------DFC P P--------- Site 3633
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ---YTPEKKA M E-----TSLF Site 4800
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -----SNPRM R A-----GERT Site 3078
Chlamydomonas.reinhardtii.LF4 -----AEKRQ K A-----LLAP Site 4562
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -----ELRDP N C--------- Site 4557
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -----PNPPN E K-----SKRH Site 3194
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho -----EDPLP T S--------- Site 4801
Schizosaccharomyces.octosporus.b.IME2 -----KPPES P N-----GQQG Site 4649
Candida.albicans.MAPK3..Extracellular.signal.regul -----LYHDP N D--------- Site 4558
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -----NRDDS L A-----VALD Site 3261
Suberites.domuncula.JNK..Stress.activated.protein. IWYDPAEVHA P P-----PKRY Site 4891
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -----PLKKH T ---------- Site 4923
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -----RLRAE P P--------- Site 3991
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -----QSRNL K P--------- Site 3895
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QQTFIVCPPA F Q--------- Site 3602
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -----SVREA G D--------- Site 4865
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -----DFVAF N N--------- Site 4922
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -----PVVKE Q S--------- Site 3991
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM -----QYYDP G D--------- Site 4558
Strongylocentrotus.purpuratus.CDK1 ----VPPPRL P T--------- Site 4922
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -----NVDKH Q V-----GVAR Site 3263
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -----QANRA N N--------- Site 3169
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -----DNKQI Q Q-----QIQQ Site 3239
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -----SLGER V H--------- Site 4881
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -----DLPPK L F----ELPDG Site 4551
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET VWYDPAEVEA P P--------- Site 4550
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -----KVQKD A R-----NVSL Site 3513
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U VWYDPAEVEA P P--------- Site 4550
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. -----PFRDP E E--------- Site 4558
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo -----EGRLR Y H--------- Site 4784
Bombus.terrestris.CDK1 -----GVTLV P P--------- Site 4000
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - S---------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -----RFAQE L K-----LRIH Site 3453
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. VWYDPLEAEA P P--------- Site 4550
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --DVELSKMA P PDLPHWQDCH Site 3636
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -----AETQT L A-----KHRR Site 4753
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -----ELREP T T--------- Site 4558
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -----ELHDS A T--------- Site 4558
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -----TSAAL P P-----GISN Site 2753
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ATMQPPLQVP P Q-----QYVN Site 4240
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl -----EGRLR Y H--------- Site 4784
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 -----NIREI E D--------- Site 4860
Homo.sapiens.HIPK3..Homeodomain.interacting.protei -----GKPTS Y SIRVDNTVPL Site 3582
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -----ETPLP I D--------- Site 4812
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -----LANNN L P-----HLLS Site 4103
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -----CLRTE P P--------- Site 3990
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -----ETPLP I D--------- Site 4812
Naegleria.gruberi.LF4 -----LDQSF G G-----GQSI Site 4689
Saccharomyces.bayanus.IME2 VETKTDVTNT E QALIFAGINP Site 3891
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -----PVVKE Q S--------- Site 3991
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -----PEEET E A-----PPYD Site 4880
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -----SGVKH T N-----PADL Site 3981
Dictyostelium.discoideum.DYRK1..Probable.serine.th -----TDETS Q P-----PQQQ Site 3803
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -----EATNT G P-----AGSS Site 3821
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -----RRLPK P P-----TGEK Site 3949
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d KTEFDFNIDT K P-----SEGP Site 4264
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -----PDREW A R-----ESDV Site 4545
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific -----LQPQP A P--------- Site 4864
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -----EPRKF K P----RPKPQ Site 3898
Aspergillus.nidulans.IME2 -----DAVDP L S----VRPRS Site 4499
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --------DM C S--------- Site 4922
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se -----EGRLR F H--------- Site 4781
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -----PLEPK P S-----SSER Site 4569
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -----DVTKP V P--------- Site 4918
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. VWYDPSEVEA P P--------- Site 4550
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -----ELRDP N S--------- Site 4558
Penicillium.marneffei.IME2 -----LGRKM S E-----KSFK Site 4506
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -----QYHDP D D--------- Site 4558
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -PYSCPEDEP T S--------- Site 4659
Drosophila.melanogaster.MAK -----ISPTA A T-----KANV Site 4466
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- K K--------- Site 3321
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------E K I--------- Site 3322
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --DVELSKMA P PDLPHWQDCH Site 3638
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -----PLPNA F S--------- Site 4902
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---EKPLPCE P E--------- Site 4895
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin VWYDPAEVEA P P--------- Site 4550
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a VWYDPAEAEA P P--------- Site 4552
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - L---------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --------DM S L--------- Site 4922
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -----SDKLW T T--------- Site 4880
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -----ELRCL G T--------- Site 4558
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. VWYDPAEAEA P P--------- Site 4874
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -----TVVKD Q A--------- Site 3949
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -----PLNK- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -PYSCPEDEP T S--------- Site 4663
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -----SLGER I H--------- Site 4001
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -----TVVKD Q A--------- Site 3949
Yarrowia.lipolytica.SSN3..Serine.threonine.protein -----EAPKV S Q--------- Site 4875
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -----EFHDA D E--------- Site 4549
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ----RTADEA T N----TGPAG Site 3818
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -----PVVEA H A--------- Site 3979
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -----ELRDE R T--------- Site 4891
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD -----PKTCL P D-----GKPL Site 4760
Candida.orthopsilosis.IME2 ---------- - K---------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -----NRPGP T P--------- Site 4880
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str VWYDASRGSC S S--------- Site 4880
Debaryomyces.hansenii.IME2 -----PERPS N K-----MTRP Site 3544
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -----ELRDP N T--------- Site 4558
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -----NNDPP V S-----SDVF Site 4557
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -----HNEFT Q N-----RPSV Site 4890
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -----PIVNG Q M--------- Site 4916
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---TAPLPAH P S--------- Site 4874
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -----KSTPK P L--------- Site 3950
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -----DLEKC K E--------- Site 4904
Monosiga.brevicollis.CDK1 -----DIDKK A L--------- Site 3991
Saccharomyces.cerevisiae.SKY1 -----DTLGM E E--------- Site 3621
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -----LYHDP N D--------- Site 4557
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -----ADGFA D K--------- Site 4898
Drosophila.melanogaster.GSK3..Protein.kinase.shagg -----GNHTL P N-----GRDM Site 4481
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. -----RFHCP S D----EWARE Site 4545
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d DGFAERFSQE L Q----LKIEK Site 3332
Dictyostelium.discoideum.CDK10..Probable.cyclin.de -----ENPFP Q S--------- Site 4811
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d DFNIDPKPSE G P----GTKYL Site 4176
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa -----SLHDP S D-----EPIC Site 4558
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -----DLERC K E--------- Site 4904
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---EKPLPCE P E--------- Site 4892
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac VWYDPSEAEA P P--------- Site 4549
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -----PFRDP E E--------- Site 4558
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --------QE P L--------- Site 3396
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri -----EGRLR Y H--------- Site 4786
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha VWYDPAEVEA P P--------- Site 4550
Saccharomyces.cerevisiae.CDK1 ---------- E S--------- Site 3321
Lodderomyces.elongisporus.IME2 -----ESVHA I D-----KYHE Site 3579
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -----QYHDP D D--------- Site 4558
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -----PFKGE P A--------- Site 3991
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar DFNVDPKSSD G P--------- Site 4302
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -----DIVSN T G--------- Site 4885
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TSAKQPTTSP A E-----RKKE Site 4411
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -----PLPAQ R F----TPIRN Site 4485
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -----SIREV G E--------- Site 4865
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen LGAQLPNDRP L P--------- Site 4807
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -----KDEGN P E--------- Site 4922
Cryptococcus.neoformans.SSN3..Serine.threonine.pro -----EEGGV D T--------- Site 4799
Salmo.salar.CDK1 -----DVTMP M P--------- Site 4918
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -----NRPAP T P--------- Site 4879
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---TAPLPAH P S--------- Site 4874
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi -----IQTHP V N--------- Site 4864
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -----ELRDP N V--------- Site 4558
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -----ALQSH P E----EEPLL Site 4670
Aspergillus.fumigatus.IME2 -----PLRPK S S-----TSRL Site 4508
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ------EEPL P T----SDVFA Site 4001
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -----PLNPQ M A--------- Site 3991
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -----QFRDI E E--------- Site 4558
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -----EGRLR F H--------- Site 4781
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -----PDPFQ Q A----LIVCP Site 3610
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina -----QYYDP T D--------- Site 4558
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -----SLGPR I H--------- Site 4001
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---EKPLPCE P E--------- Site 4895
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de -----SLREE S E--------- Site 4867
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S VWYDAEEVDA P A--------- Site 4883
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -----PLEET E A-----EPYD Site 4878
Candida.glabrata.IME2 VTDEQPNDRE K D-----TNFE Site 3489
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -----VEPKP L P----DIIDQ Site 4578
Schizosaccharomyces.pombe.IME2 --VSAPADAV A S-----KEEV Site 4619
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -----LYHDP N D--------- Site 4558
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -------DSS N H--------- Site 3633
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---MQQLRSA H E----ATRYY Site 4663
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -----SGQGQ Q A--------- Site 4904
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -----SLGDR V H--------- Site 4881
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d -----SFQED Q M--------- Site 4874
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -----VLEME P S--------- Site 3991
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -----ELRDP N T--------- Site 4558
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -----NDDFT R N-----KPDL Site 3586
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -----ELRSP D A--------- Site 4558
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -----PPPYI K P-----VPPA Site 4563
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos TSNSVSTSPA M E-----QSQS Site 3744
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -----DVTKP V P--------- Site 4918
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PSGDCAMESP P P----APLPC Site 4297
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -----QYHDP D D--------- Site 4558
Lachancea.thermotolerans.SKY1 -----DTVGL E G--------- Site 3621
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -IYSFPTDEP I S--------- Site 4530
Dictyostelium.discoideum.CDK1 -----DLDTS F F--------- Site 4922
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -----SLRDT E D--------- Site 4558
Xenopus.tropicalis.IME2 -----DVSRP T P--------- Site 4919
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U QTFIVCPPAF Q A--------- Site 3594
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -----PIVKD Q A--------- Site 3949
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -----DVSRP T P----HLI-- Site 4919
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -----RKSPQ S T--------- Site 3995
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. -----VLPSQ L Y--------- Site 4882
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -----PAEEP H F-----DRII Site 4869
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -----KTADE G T----NTSNS Site 3731
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -----ELRDP N V--------- Site 4558
Drosophila.melanogaster.GSK3H..Putative.glycogen.s -----PHQQL P N-----GRSL Site 4473
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD -----EAPLP S L--------- Site 4884
Encephalitozoon.cuniculi.CDK1 -----GMPLI M E--------- Site 4922
Saccharomyces.kluyveri.IME2 -----DDNYM L N-----NSTD Site 3876
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a -----QYYDP S D--------- Site 4558
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -----ALPSQ L Y--------- Site 4882
Cryptococcus.neoformans.IME2 SYGQRPPEAA A A-----DARA Site 4467
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---MQQLRSA H E----TTHYY Site 4663
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - S---------  
Candida.lusitaniae.IME2 -----EYNTL G K-----EMLN Site 4792
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QQTFIVCPPA F Q--------- Site 3602
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -----PTADV F A-----GCPI Site 4768
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -----TDPLP A H--------- Site 4874
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. -----SCRED L E--------- Site 4867
Gallus.gallus.CDK2 -----DVTRA V P--------- Site 4918
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -----EQRKT E K----RALGS Site 4750
Homo.sapiens.CDK1 -----DLDNQ I K-----KM-- Site 4920
Candida.albicans.CDK1 -----DNDDR D H--------- Site 4905
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -----PIVKD Q G--------- Site 3945
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PSGDCAMESP P P----ALPPC Site 4272
Mus.musculus.ICK..Serine.threonine.protein.kinase. -----PAPPA Q A----PAKAY Site 4569
Saccharomyces.castelli.IME2 -----DTVAS E S-----MKNS Site 3798
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -----CLRKA T R-----K--- Site 4921
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -----NRPGP T P--------- Site 4879
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -----DLPPR L W--------- Site 4880
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -----DLRDP A A--------- Site 4558
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -----ELNEN T Y--------- Site 4892
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -----IRPGP T P--------- Site 4880
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -----SDPMP S D--------- Site 4873
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -----PDPFQ Q A----LIVCP Site 3608
Acyrthosiphon.pisum.CDK1 -----ASLPE T P--------- Site 4922
Candida.tropicalis.CDK1 -----ETIKM M D--------- Site 3993
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -----EEPQP T Q-------DV Site 4558
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G -----PGARM P N-----GREF Site 4794
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -----PIVKE Q G--------- Site 3987
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -----SLGER I H--------- Site 4001
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -----SLGPR I H--------- Site 4001
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -----QFRDI E E--------- Site 4558
Candida.albicans.SSN3..Serine.threonine.protein.ki -----ELPKV N E-----NAFE Site 4814
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -----EIREM E K----RQYAL Site 4654
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA -----PGIKL P N--------- Site 4860
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -----PDDWP E P-----TAYD Site 4877
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---TPPYPAN P S-----ELQS Site 4400
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -----PIVKD Q S--------- Site 3948
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -----GKPTS Y SVRVDNALPL Site 3586
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -----ETPLP I D--------- Site 4812
Candida.dubliniensis.IME2 -----ESIAM M D--------- Site 3991
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a VWYDPAEAEA P P--------- Site 4553
Aspergillus.niger.IME2 ---DAIDPLR P K----SSTAR Site 4500
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -----QYHDP D D--------- Site 4558
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -----KLLQE A K-----VNSL Site 3413
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -----DLPPR L W--------- Site 4880
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -----TVVKD Q A--------- Site 3949
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -----QQIDQ V P--------- Site 3807
Schizosaccharomyces.japonicus.IME2 SLYGLPNHST T T-----AYLQ Site 4627
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. VWFDEIEVYA P P--------- Site 4886
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -------DFC P P--------- Site 3633
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -----ELRDP E T--------- Site 4558
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -----ELRNP D A--------- Site 4558
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -----SLHDT E D--------- Site 4558
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --------TK F E--------- Site 3396
Kluyveromyces.waltii.IME2 -----ETGGE Q L-----GTEM Site 3892
Debaryomyces.hansenii.SKY1 -----DALGL E N--------- Site 3628
Saccharomyces.cerevisiae.IME2 GNVTNTEQAL I F----AGINP Site 3896
Schizosaccharomyces.japonicus.b.IME2 -----NGNEI I E-----STIS Site 3376
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -----DLQKG K D--------- Site 4903
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -----PVVKE Q S--------- Site 3991
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -IYSFPMDEP I S--------- Site 4529
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -----DLERY K D--------- Site 4904
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -----ETKRC D T--------- Site 4876
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -----QFHDI D D--------- Site 4878
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de IEKFIPELRA K L----LQEAK Site 3405
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act VWYDPSEVEA P P--------- Site 4872
Candida.albicans.IME2 -----ESITM M D--------- Site 3991
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -----DDPQA C S--------- Site 4906
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -----ENPQP R D--------- Site 4908
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -QYHDPDDEP V A--------- Site 4882
Kluyveromyces.lactis.IME2 -----KLPKV Q K-----NNQM Site 3826
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PSGDCAMESP P P----APPPC Site 4262
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. VWYDPAEVEA P P--------- Site 4550
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -----QYHDP E D--------- Site 4558
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -----QYHDP D D--------- Site 4558
Amphimedon.queenslandica.CDK1 ---------- - E---------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -----SFQEA Q I--------- Site 4901
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -----ELPLP I D--------- Site 4549
Neurospora.crassa.IME2 -----PLRPK S S-----ASRI Site 4492
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -----DSSSS G H--------- Site 4922
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -----KEESD A E--------- Site 4922
Hydra.magnipapillata.CDK1 -----DLNHN M ---------- Site 4923
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---EKPLPCE P E--------- Site 4893
Ashbya.gossypii.IME2 -----QETKQ P P-----LSTA Site 3469
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi -----IQPHP G S--------- Site 4864
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -----KSVPR P L--------- Site 3949
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -----ELKLD D G--------- Site 4882
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace -----KFHNP S S--------- Site 4558
Schizosaccharomyces.pombe.b.IME2 -----LPPSA S K-----SNSV Site 4694
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a -----QYYDP S D--------- Site 4558
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom QAGTAQFGCG D AFHQTLIICP Site 3578
Schizosaccharomyces.pombe.CDK1 -----DFH-- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 -----DVQVQ I P--------- Site 4001
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -----ATRGL P S-----TASG Site 3263
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac VWYDPSEAEA P P--------- Site 4872
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -----PGHSL A P--------- Site 3996
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -----DTLRS H P----NSERL Site 4656
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -----SPEPS P A--------- Site 3995
Yarrowia.lipolytica.IME2 -----NPHGD P P-----ILMD Site 3580
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -----ESDIP V S-----ENVF Site 4777
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -----DVTMP V P--------- Site 4918
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -----ELNED L L--------- Site 4907
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -----ELRDP S T--------- Site 4558
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -----ELRDP N T--------- Site 4558
Species Residue at Site 2242
in 'muscle'
msaprobs

The residue for every species at site 2242 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -QKEERVPSQ P P--------- Site 3786
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo -----EGRLR Y H--------- Site 4784
Scheffersomyces.stipitis.SKY1 -----DALGL E N--------- Site 3628
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -------DFC P P--------- Site 3633

Generated by PhyloBot at 04:40, November 12th 2019
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