cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2241 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2241 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2241 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2241 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ------AKEE K VQ-----KPR Site 4609
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ------DVPP F LN-------- Site 4921
Danio.rerio.CDK1 ------DVTM P VP-------- Site 4001
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ------SLHD I SD-------- Site 4001
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --------DF C PP-------- Site 3396
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 ----YTPEKK A ME-----TSL Site 4799
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ------SNPR M RA-----GER Site 3077
Chlamydomonas.reinhardtii.LF4 ------AEKR Q KA-----LLA Site 4561
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ------ELRD P NC-------- Site 4001
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ------PNPP N EK-----SKR Site 3193
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ------EDPL P TS-------- Site 4001
Schizosaccharomyces.octosporus.b.IME2 ------KPPE S PN-----GQQ Site 4648
Candida.albicans.MAPK3..Extracellular.signal.regul ------LYHD P ND-------- Site 4001
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ------NRDD S LA-----VAL Site 3260
Suberites.domuncula.JNK..Stress.activated.protein. -IWYDPAEVH A PP-----PKR Site 4890
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ------PLKK H T--------- Site 4922
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------RLRA E PP-------- Site 3990
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------QSRN L KP-------- Site 3894
Homo.sapiens.HIPK1..Homeodomain.interacting.protei FQQTFIVCPP A FQ-------- Site 3601
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ------SVRE A GD-------- Site 4813
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------DFVA F NN-------- Site 4921
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------PVVK E QS-------- Site 3990
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ------QYYD P GD-------- Site 4001
Strongylocentrotus.purpuratus.CDK1 -----VPPPR L PT-------- Site 4921
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ------NVDK H QV-----GVA Site 3262
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ------QANR A NN-------- Site 3168
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ------DNKQ I QQ-----QIQ Site 3238
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ------SLGE R VH-------- Site 4001
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------DLPP K LF----ELPD Site 4550
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -VWYDPAEVE A PP-------- Site 4549
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ------KVQK D AR-----NVS Site 3512
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -VWYDPAEVE A PP-------- Site 4549
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ------PFRD P EE-------- Site 4001
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ------EGRL R YH-------- Site 4783
Bombus.terrestris.CDK1 ------GVTL V PP-------- Site 3999
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - -S--------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ------RFAQ E LK-----LRI Site 3452
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -VWYDPLEAE A PP-------- Site 4549
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---DVELSKM A PPDLPHWQDC Site 3635
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ------AETQ T LA-----KHR Site 4752
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ------ELRE P TT-------- Site 4001
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ------ELHD S AT-------- Site 4001
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ------TSAA L PP-----GIS Site 2752
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO SATMQPPLQV P PQ-----QYV Site 4239
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ------EGRL R YH-------- Site 4783
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ------NIRE I ED-------- Site 4813
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ------GKPT S YSIRVDNTVP Site 3581
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ------ETPL P ID-------- Site 4001
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ------LANN N LP-----HLL Site 4102
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ------CLRT E PP-------- Site 3989
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ------ETPL P ID-------- Site 4001
Naegleria.gruberi.LF4 ------LDQS F GG-----GQS Site 4688
Saccharomyces.bayanus.IME2 QVETKTDVTN T EQALIFAGIN Site 3890
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------PVVK E QS-------- Site 3990
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ------PEEE T EA-----PPY Site 4879
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ------SGVK H TN-----PAD Site 3980
Dictyostelium.discoideum.DYRK1..Probable.serine.th ------TDET S QP-----PQQ Site 3802
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ------EATN T GP-----AGS Site 3820
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------RRLP K PP-----TGE Site 3948
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d SKTEFDFNID T KP-----SEG Site 4263
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ------PDRE W AR-----ESD Site 4544
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ------LQPQ P AP-------- Site 4001
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------EPRK F KP----RPKP Site 3897
Aspergillus.nidulans.IME2 ------DAVD P LS----VRPR Site 4001
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------D M CS-------- Site 3322
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ------EGRL R FH-------- Site 4780
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ------PLEP K PS-----SSE Site 4568
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------DVTK P VP-------- Site 4001
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -VWYDPSEVE A PP-------- Site 4549
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ------ELRD P NS-------- Site 4001
Penicillium.marneffei.IME2 ------LGRK M SE-----KSF Site 4505
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ------QYHD P DD-------- Site 4001
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --PYSCPEDE P TS-------- Site 4658
Drosophila.melanogaster.MAK ------ISPT A AT-----KAN Site 4465
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - KK--------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- E KI-------- Site 3321
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---DVELSKM A PPDLPHWQDC Site 3637
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ------PLPN A FS-------- Site 4901
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ----EKPLPC E PE-------- Site 4894
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -VWYDPAEVE A PP-------- Site 4549
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -VWYDPAEAE A PP-------- Site 4551
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - -L--------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------D M SL-------- Site 3322
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ------SDKL W TT-------- Site 4879
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ------ELRC L GT-------- Site 4557
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -VWYDPAEAE A PP-------- Site 4873
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ------TVVK D QA-------- Site 3948
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ------PLNK - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --PYSCPEDE P TS-------- Site 4662
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ------SLGE R IH-------- Site 4000
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ------TVVK D QA-------- Site 3948
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ------EAPK V SQ-------- Site 4813
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ------EFHD A DE-------- Site 4001
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -----RTADE A TN----TGPA Site 3817
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ------PVVE A HA-------- Site 3978
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ------ELRD E RT-------- Site 4001
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ------PKTC L PD-----GKP Site 4759
Candida.orthopsilosis.IME2 ---------- - -K--------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ------NRPG P TP-------- Site 4001
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -VWYDASRGS C SS-------- Site 4879
Debaryomyces.hansenii.IME2 ------PERP S NK-----MTR Site 3543
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ------ELRD P NT-------- Site 4001
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ------NNDP P VS-----SDV Site 4001
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ------HNEF T QN-----RPS Site 4889
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------PIVN G QM-------- Site 4001
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ----TAPLPA H PS-------- Site 4873
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------KSTP K PL-------- Site 3949
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------DLEK C KE-------- Site 4903
Monosiga.brevicollis.CDK1 ------DIDK K AL-------- Site 3990
Saccharomyces.cerevisiae.SKY1 ------DTLG M EE-------- Site 3620
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ------LYHD P ND-------- Site 4001
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ------ADGF A DK-------- Site 4897
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ------GNHT L PN-----GRD Site 4480
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ------RFHC P SD----EWAR Site 4001
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d MDGFAERFSQ E LQ----LKIE Site 3331
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ------ENPF P QS-------- Site 4001
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d FDFNIDPKPS E GP----GTKY Site 4175
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ------SLHD P SD-----EPI Site 4001
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------DLER C KE-------- Site 4903
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ----EKPLPC E PE-------- Site 4891
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac -VWYDPSEAE A PP-------- Site 4548
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ------PFRD P EE-------- Site 4001
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------Q E PL-------- Site 3322
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ------EGRL R YH-------- Site 4785
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -VWYDPAEVE A PP-------- Site 4549
Saccharomyces.cerevisiae.CDK1 ---------- - ES--------  
Lodderomyces.elongisporus.IME2 ------ESVH A ID-----KYH Site 3578
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ------QYHD P DD-------- Site 4001
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------PFKG E PA-------- Site 3990
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar FDFNVDPKSS D GP-------- Site 4301
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ------DIVS N TG-------- Site 4884
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TTSAKQPTTS P AE-----RKK Site 4410
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ------PLPA Q RF----TPIR Site 4484
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ------SIRE V GE-------- Site 4813
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen RLGAQLPNDR P LP-------- Site 4806
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------KDEG N PE-------- Site 4921
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ------EEGG V DT-------- Site 4798
Salmo.salar.CDK1 ------DVTM P MP-------- Site 4001
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ------NRPA P TP-------- Site 4001
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ----TAPLPA H PS-------- Site 4873
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ------IQTH P VN-------- Site 4001
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ------ELRD P NV-------- Site 4001
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ------ALQS H PE----EEPL Site 4669
Aspergillus.fumigatus.IME2 ------PLRP K SS-----TSR Site 4507
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -------EEP L PT----SDVF Site 3633
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------PLNP Q MA-------- Site 3990
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ------QFRD I EE-------- Site 4001
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ------EGRL R FH-------- Site 4780
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ------PDPF Q QA----LIVC Site 3609
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ------QYYD P TD-------- Site 4001
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ------SLGP R IH-------- Site 4000
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ----EKPLPC E PE-------- Site 4894
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ------SLRE E SE-------- Site 4866
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S -VWYDAEEVD A PA-------- Site 4882
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ------PLEE T EA-----EPY Site 4877
Candida.glabrata.IME2 LVTDEQPNDR E KD-----TNF Site 3488
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ------VEPK P LP----DIID Site 4577
Schizosaccharomyces.pombe.IME2 ---VSAPADA V AS-----KEE Site 4618
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ------LYHD P ND-------- Site 4001
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --------DS S NH-------- Site 3396
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ----MQQLRS A HE----ATRY Site 4662
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ------SGQG Q QA-------- Site 4903
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ------SLGD R VH-------- Site 4001
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ------SFQE D QM-------- Site 4873
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------VLEM E PS-------- Site 3990
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ------ELRD P NT-------- Site 4001
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ------NDDF T RN-----KPD Site 3585
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ------ELRS P DA-------- Site 4001
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ------PPPY I KP-----VPP Site 4562
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos NTSNSVSTSP A ME-----QSQ Site 3743
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------DVTK P VP-------- Site 4001
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act APSGDCAMES P PP----APLP Site 4296
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ------QYHD P DD-------- Site 4001
Lachancea.thermotolerans.SKY1 ------DTVG L EG-------- Site 3620
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --IYSFPTDE P IS-------- Site 4529
Dictyostelium.discoideum.CDK1 ------DLDT S FF-------- Site 4921
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ------SLRD T ED-------- Site 4001
Xenopus.tropicalis.IME2 ------DVSR P TP-------- Site 4001
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U QQTFIVCPPA F QA-------- Site 3593
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ------PIVK D QA-------- Site 3948
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------DVSR P TP----HLI- Site 4001
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------RKSP Q ST-------- Site 3633
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ------VLPS Q LY-------- Site 4881
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ------PAEE P HF-----DRI Site 4868
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ------KTAD E GT----NTSN Site 3730
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ------ELRD P NV-------- Site 4001
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ------PHQQ L PN-----GRS Site 4472
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------EAPL P SL-------- Site 4001
Encephalitozoon.cuniculi.CDK1 ------GMPL I ME-------- Site 4921
Saccharomyces.kluyveri.IME2 ------DDNY M LN-----NST Site 3875
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ------QYYD P SD-------- Site 4001
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ------ALPS Q LY-------- Site 4881
Cryptococcus.neoformans.IME2 GSYGQRPPEA A AA-----DAR Site 4466
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ----MQQLRS A HE----TTHY Site 4662
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - -S--------  
Candida.lusitaniae.IME2 ------EYNT L GK-----EML Site 4001
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom FQQTFIVCPP A FQ-------- Site 3601
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ------PTAD V FA-----GCP Site 4767
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ------TDPL P AH-------- Site 4873
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ------SCRE D LE-------- Site 4866
Gallus.gallus.CDK2 ------DVTR A VP-------- Site 4001
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ------EQRK T EK----RALG Site 4001
Homo.sapiens.CDK1 ------DLDN Q IK-----KM- Site 4001
Candida.albicans.CDK1 ------DNDD R DH-------- Site 4904
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ------PIVK D QG-------- Site 3944
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a APSGDCAMES P PP----ALPP Site 4271
Mus.musculus.ICK..Serine.threonine.protein.kinase. ------PAPP A QA----PAKA Site 4568
Saccharomyces.castelli.IME2 ------DTVA S ES-----MKN Site 3797
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ------CLRK A TR-----K-- Site 4001
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ------NRPG P TP-------- Site 4001
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ------DLPP R LW-------- Site 4879
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ------DLRD P AA-------- Site 4001
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------ELNE N TY-------- Site 4891
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ------IRPG P TP-------- Site 4001
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ------SDPM P SD-------- Site 4872
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ------PDPF Q QA----LIVC Site 3607
Acyrthosiphon.pisum.CDK1 ------ASLP E TP-------- Site 4921
Candida.tropicalis.CDK1 ------ETIK M MD-------- Site 3992
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ------EEPQ P TQ-------D Site 4001
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ------PGAR M PN-----GRE Site 4793
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ------PIVK E QG-------- Site 3986
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ------SLGE R IH-------- Site 4000
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ------SLGP R IH-------- Site 4000
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ------QFRD I EE-------- Site 4001
Candida.albicans.SSN3..Serine.threonine.protein.ki ------ELPK V NE-----NAF Site 4813
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ------EIRE M EK----RQYA Site 4001
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ------PGIK L PN-------- Site 4813
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ------PDDW P EP-----TAY Site 4876
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ----TPPYPA N PS-----ELQ Site 4399
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ------PIVK D QS-------- Site 3947
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ------GKPT S YSVRVDNALP Site 3585
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ------ETPL P ID-------- Site 4001
Candida.dubliniensis.IME2 ------ESIA M MD-------- Site 3990
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a -VWYDPAEAE A PP-------- Site 4552
Aspergillus.niger.IME2 ----DAIDPL R PK----SSTA Site 4499
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ------QYHD P DD-------- Site 4001
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ------KLLQ E AK-----VNS Site 3412
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ------DLPP R LW-------- Site 4879
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ------TVVK D QA-------- Site 3948
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ------QQID Q VP-------- Site 3806
Schizosaccharomyces.japonicus.IME2 KSLYGLPNHS T TT-----AYL Site 4626
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -VWFDEIEVY A PP-------- Site 4885
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --------DF C PP-------- Site 3396
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ------ELRD P ET-------- Site 4001
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ------ELRN P DA-------- Site 4001
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ------SLHD T ED-------- Site 4001
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------T K FE-------- Site 3322
Kluyveromyces.waltii.IME2 ------ETGG E QL-----GTE Site 3891
Debaryomyces.hansenii.SKY1 ------DALG L EN-------- Site 3627
Saccharomyces.cerevisiae.IME2 RGNVTNTEQA L IF----AGIN Site 3895
Schizosaccharomyces.japonicus.b.IME2 ------NGNE I IE-----STI Site 3375
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------DLQK G KD-------- Site 4001
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------PVVK E QS-------- Site 3990
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --IYSFPMDE P IS-------- Site 4528
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------DLER Y KD-------- Site 4903
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ------ETKR C DT-------- Site 4001
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ------QFHD I DD-------- Site 4001
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de FIEKFIPELR A KL----LQEA Site 3404
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act -VWYDPSEVE A PP-------- Site 4871
Candida.albicans.IME2 ------ESIT M MD-------- Site 3990
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------DDPQ A CS-------- Site 4905
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ------ENPQ P RD-------- Site 4001
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --QYHDPDDE P VA-------- Site 4881
Kluyveromyces.lactis.IME2 ------KLPK V QK-----NNQ Site 3825
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina APSGDCAMES P PP----APPP Site 4261
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -VWYDPAEVE A PP-------- Site 4549
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ------QYHD P ED-------- Site 4001
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ------QYHD P DD-------- Site 4001
Amphimedon.queenslandica.CDK1 ---------- - -E--------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ------SFQE A QI-------- Site 4900
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ------ELPL P ID-------- Site 4001
Neurospora.crassa.IME2 ------PLRP K SS-----ASR Site 4491
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------DSSS S GH-------- Site 4921
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------KEES D AE-------- Site 4921
Hydra.magnipapillata.CDK1 ------DLNH N M--------- Site 4922
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ----EKPLPC E PE-------- Site 4892
Ashbya.gossypii.IME2 ------QETK Q PP-----LST Site 3468
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ------IQPH P GS-------- Site 4001
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------KSVP R PL-------- Site 3948
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ------ELKL D DG-------- Site 4881
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ------KFHN P SS-------- Site 4001
Schizosaccharomyces.pombe.b.IME2 ------LPPS A SK-----SNS Site 4693
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------QYYD P SD-------- Site 4001
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom LQAGTAQFGC G DAFHQTLIIC Site 3577
Schizosaccharomyces.pombe.CDK1 ------DFH- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ------DVQV Q IP-------- Site 4000
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ------ATRG L PS-----TAS Site 3262
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac -VWYDPSEAE A PP-------- Site 4871
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------PGHS L AP-------- Site 3995
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ------DTLR S HP----NSER Site 4655
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------SPEP S PA-------- Site 3633
Yarrowia.lipolytica.IME2 ------NPHG D PP-----ILM Site 3579
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ------ESDI P VS-----ENV Site 4001
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------DVTM P VP-------- Site 4001
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ------ELNE D LL-------- Site 4906
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ------ELRD P ST-------- Site 4001
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ------ELRD P NT-------- Site 4001
Species Residue at Site 2241
in 'muscle'
msaprobs

The residue for every species at site 2241 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --QKEERVPS Q PP-------- Site 3785
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ------EGRL R YH-------- Site 4783
Scheffersomyces.stipitis.SKY1 ------DALG L EN-------- Site 3627
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --------DF C PP-------- Site 3396

Generated by PhyloBot at 04:40, November 12th 2019
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