cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 2238 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2238 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2238 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2238 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------A K EEKVQ----- Site 3322
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------D V PPFLN----- Site 3322
Danio.rerio.CDK1 ---------D V TMPVP----- Site 3322
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------S L HDISD----- Site 3322
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - DFCPP-----  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 -------YTP E KKAME----- Site 4796
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------S N PRMRA----- Site 3074
Chlamydomonas.reinhardtii.LF4 ---------A E KRQKA----- Site 4558
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------E L RDPNC----- Site 3322
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - ----------  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------P N PPNEK----- Site 3190
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------E D PLPTS----- Site 3322
Schizosaccharomyces.octosporus.b.IME2 ---------K P PESPN----- Site 3322
Candida.albicans.MAPK3..Extracellular.signal.regul ---------L Y HDPND----- Site 3322
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------N R DDSLA----- Site 3154
Suberites.domuncula.JNK..Stress.activated.protein. ----IWYDPA E VHAPP----- Site 4887
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------P L KKHT------ Site 3322
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------R L RAEPP----- Site 3322
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------Q S RNLKP----- Site 3322
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TDPFQQTFIV C PPAFQ----- Site 3598
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------S V REAGD----- Site 3322
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------D F VAFNN----- Site 3322
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------P V VKEQS----- Site 3322
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------Q Y YDPGD----- Site 3322
Strongylocentrotus.purpuratus.CDK1 --------VP P PRLPT----- Site 4918
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------N V DKHQV----- Site 3156
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------Q A NRANN----- Site 3165
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------D N KQIQQ----- Site 3235
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------S L GERVH----- Site 3322
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------D L PPKLF----E Site 3322
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ----VWYDPA E VEAPP----- Site 4546
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------K V QKDAR----- Site 3509
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ----VWYDPA E VEAPP----- Site 4546
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------P F RDPEE----- Site 3322
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------E G RLRYH----- Site 3322
Bombus.terrestris.CDK1 ---------G V TLVPP----- Site 3322
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----S-----  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------R F AQELK----- Site 3449
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ----VWYDPL E AEAPP----- Site 4546
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ------DVEL S KMAPPDLPHW Site 3632
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------A E TQTLA----- Site 4749
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------E L REPTT----- Site 3322
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------E L HDSAT----- Site 3322
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - ----------  
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------T S AALPP----- Site 2749
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO VVGSATMQPP L QVPPQ----- Site 4236
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------E G RLRYH----- Site 3322
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------N I REIED----- Site 3322
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ---------G K PTSYSIRVDN Site 3578
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------E T PLPID----- Site 3322
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------L A NNNLP----- Site 4099
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------C L RTEPP----- Site 3322
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------E T PLPID----- Site 3322
Naegleria.gruberi.LF4 ---------L D QSFGG----- Site 4685
Saccharomyces.bayanus.IME2 VASQVETKTD V TNTEQALIFA Site 3887
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------P V VKEQS----- Site 3322
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------P E EETEA----- Site 4558
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------S G VKHTN----- Site 3322
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------T D ETSQP----- Site 3322
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------E A TNTGP----- Site 3817
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------R R LPKPP----- Site 3322
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d EAKSKTEFDF N IDTKP----- Site 4260
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------P D REWAR----- Site 4541
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------L Q PQPAP----- Site 3322
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------E P RKFKP----R Site 3322
Aspergillus.nidulans.IME2 ---------D A VDPLS----V Site 3322
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - -DMCS-----  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------E G RLRFH----- Site 3322
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------P L EPKPS----- Site 4565
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------D V TKPVP----- Site 3322
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ----VWYDPS E VEAPP----- Site 4546
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------E L RDPNS----- Site 3322
Penicillium.marneffei.IME2 ---------L G RKMSE----- Site 4502
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------Q Y HDPDD----- Site 3322
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a -----PYSCP E DEPTS----- Site 4655
Drosophila.melanogaster.MAK ---------I S PTAAT----- Site 4462
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ---KK-----  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - --EKI-----  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ------DVEL S KMAPPDLPHW Site 3634
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------P L PNAFS----- Site 4898
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -------EKP L PCEPE----- Site 3633
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ----VWYDPA E VEAPP----- Site 4546
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ----VWYDPA E AEAPP----- Site 4548
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----L-----  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - -DMSL-----  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - ----------  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------S D KLWTT----- Site 3322
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------E L RCLGT----- Site 3322
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ----VWYDPA E AEAPP----- Site 4870
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------T V VKDQA----- Site 3322
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------P L NK-------- Site 3322
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -----PYSCP E DEPTS----- Site 4659
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------S L GERIH----- Site 3322
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------T V VKDQA----- Site 3322
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------E A PKVSQ----- Site 3322
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------E F HDADE----- Site 3322
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --------RT A DEATN----T Site 3396
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------P V VEAHA----- Site 3322
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------E L RDERT----- Site 3322
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------P K TCLPD----- Site 4558
Candida.orthopsilosis.IME2 ---------- - ----K-----  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------N R PGPTP----- Site 3322
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ----VWYDAS R GSCSS----- Site 4876
Debaryomyces.hansenii.IME2 ---------P E RPSNK----- Site 3540
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------E L RDPNT----- Site 3322
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------N N DPPVS----- Site 3322
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------H N EFTQN----- Site 3322
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------P I VNGQM----- Site 3322
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -------TAP L PAHPS----- Site 3633
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------K S TPKPL----- Site 3322
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------D L EKCKE----- Site 3322
Monosiga.brevicollis.CDK1 ---------D I DKKAL----- Site 3322
Saccharomyces.cerevisiae.SKY1 ---------D T LGMEE----- Site 3322
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------L Y HDPND----- Site 3322
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------A D GFADK----- Site 3322
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------G N HTLPN----- Site 4477
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------R F HCPSD----E Site 3322
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---MDGFAER F SQELQ----L Site 3328
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------E N PFPQS----- Site 3322
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d KTEFDFNIDP K PSEGP----G Site 4172
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------S L HDPSD----- Site 3322
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------D L ERCKE----- Site 3322
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -------EKP L PCEPE----- Site 3633
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ----VWYDPS E AEAPP----- Site 4545
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------P F RDPEE----- Site 3322
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - -QEPL-----  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------E G RLRYH----- Site 3322
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ----VWYDPA E VEAPP----- Site 4546
Saccharomyces.cerevisiae.CDK1 ---------- - ---ES-----  
Lodderomyces.elongisporus.IME2 ---------E S VHAID----- Site 3322
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------Q Y HDPDD----- Site 3322
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------P F KGEPA----- Site 3322
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar KTEFDFNVDP K SSDGP----- Site 4298
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------D I VSNTG----- Site 3322
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D QARTTSAKQP T TSPAE----- Site 4407
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------P L PAQRF----T Site 4481
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------S I REVGE----- Site 3322
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ELRRLGAQLP N DRPLP----- Site 4557
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------K D EGNPE----- Site 3322
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------E E GGVDT----- Site 3322
Salmo.salar.CDK1 ---------D V TMPMP----- Site 3322
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------N R PAPTP----- Site 3322
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -------TAP L PAHPS----- Site 3633
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------I Q THPVN----- Site 3322
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------E L RDPNV----- Site 3322
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ---------A L QSHPE----E Site 4666
Aspergillus.fumigatus.IME2 ---------P L RPKSS----- Site 4504
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- E EPLPT----S Site 3321
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------P L NPQMA----- Site 3322
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------Q F RDIEE----- Site 3322
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------E G RLRFH----- Site 3322
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------P D PFQQA----L Site 3606
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------Q Y YDPTD----- Site 3322
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------S L GPRIH----- Site 3322
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -------EKP L PCEPE----- Site 3633
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------S L REESE----- Site 3322
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ----VWYDAE E VDAPA----- Site 4879
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------P L EETEA----- Site 4558
Candida.glabrata.IME2 TEELVTDEQP N DREKD----- Site 3485
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------V E PKPLP----D Site 4574
Schizosaccharomyces.pombe.IME2 ------VSAP A DAVAS----- Site 4615
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------L Y HDPND----- Site 3322
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - DSSNH-----  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom -------MQQ L RSAHE----A Site 4659
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------S G QGQQA----- Site 4900
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------S L GDRVH----- Site 3322
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------S F QEDQM----- Site 3322
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------V L EMEPS----- Site 3322
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------E L RDPNT----- Site 3322
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------N D DFTRN----- Site 3322
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------E L RSPDA----- Site 3322
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------P P PYIKP----- Site 4559
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos EGTNTSNSVS T SPAME----- Site 3740
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------D V TKPVP----- Site 3322
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act SPWAPSGDCA M ESPPP----A Site 4293
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------Q Y HDPDD----- Site 3322
Lachancea.thermotolerans.SKY1 ---------D T VGLEG----- Site 3322
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a -----IYSFP T DEPIS----- Site 4526
Dictyostelium.discoideum.CDK1 ---------D L DTSFF----- Site 3322
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------S L RDTED----- Site 3322
Xenopus.tropicalis.IME2 ---------D V SRPTP----- Site 3322
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U DPFQQTFIVC P PAFQA----- Site 3590
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------P I VKDQA----- Site 3322
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------D V SRPTP----H Site 3322
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------R K SPQST----- Site 3322
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------V L PSQLY----- Site 3322
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------P A EEPHF----- Site 4558
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------K T ADEGT----N Site 3322
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------E L RDPNV----- Site 3322
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------P H QQLPN----- Site 4469
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------E A PLPSL----- Site 3322
Encephalitozoon.cuniculi.CDK1 ---------G M PLIME----- Site 3322
Saccharomyces.kluyveri.IME2 ---------D D NYMLN----- Site 3872
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------Q Y YDPSD----- Site 3322
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------A L PSQLY----- Site 3322
Cryptococcus.neoformans.IME2 DDLGSYGQRP P EAAAA----- Site 4463
Homo.sapiens.HIPK4..Homeodomain.interacting.protei -------MQQ L RSAHE----T Site 4659
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----S-----  
Candida.lusitaniae.IME2 ---------E Y NTLGK----- Site 3322
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TDPFQQTFIV C PPAFQ----- Site 3598
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------P T ADVFA----- Site 4558
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------T D PLPAH----- Site 3322
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------S C REDLE----- Site 3322
Gallus.gallus.CDK2 ---------D V TRAVP----- Site 3322
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------E Q RKTEK----R Site 3322
Homo.sapiens.CDK1 ---------D L DNQIK----- Site 3322
Candida.albicans.CDK1 ---------D N DDRDH----- Site 3322
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------P I VKDQG----- Site 3322
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a SPWAPSGDCA M ESPPP----A Site 4268
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------P A PPAQA----P Site 4565
Saccharomyces.castelli.IME2 ---------D T VASES----- Site 3322
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------C L RKATR----- Site 3322
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------N R PGPTP----- Site 3322
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------D L PPRLW----- Site 3322
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------D L RDPAA----- Site 3322
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------E L NENTY----- Site 3322
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------I R PGPTP----- Site 3322
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------S D PMPSD----- Site 3322
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------P D PFQQA----L Site 3604
Acyrthosiphon.pisum.CDK1 ---------A S LPETP----- Site 4918
Candida.tropicalis.CDK1 ---------E T IKMMD----- Site 3322
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------E E PQPTQ----- Site 3322
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------P G ARMPN----- Site 4558
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------P I VKEQG----- Site 3322
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------S L GERIH----- Site 3322
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------S L GPRIH----- Site 3322
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------Q F RDIEE----- Site 3322
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------E L PKVNE----- Site 3322
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------E I REMEK----R Site 3322
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------P G IKLPN----- Site 4810
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------P D DWPEP----- Site 4873
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -------TPP Y PANPS----- Site 3633
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------P I VKDQS----- Site 3322
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ---------G K PTSYSVRVDN Site 3582
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------E T PLPID----- Site 3322
Candida.dubliniensis.IME2 ---------E S IAMMD----- Site 3322
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ----VWYDPA E AEAPP----- Site 4549
Aspergillus.niger.IME2 -------DAI D PLRPK----S Site 3633
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------Q Y HDPDD----- Site 3322
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------K L LQEAK----- Site 3409
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------D L PPRLW----- Site 3322
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------T V VKDQA----- Site 3322
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------Q Q IDQVP----- Site 3803
Schizosaccharomyces.japonicus.IME2 VPPKSLYGLP N HSTTT----- Site 4623
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ----VWFDEI E VYAPP----- Site 4882
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - DFCPP-----  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------E L RDPET----- Site 3322
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------E L RNPDA----- Site 3322
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------S L HDTED----- Site 3322
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - -TKFE-----  
Kluyveromyces.waltii.IME2 ---------E T GGEQL----- Site 3322
Debaryomyces.hansenii.SKY1 ---------D A LGLEN----- Site 3322
Saccharomyces.cerevisiae.IME2 VDARGNVTNT E QALIF----A Site 3892
Schizosaccharomyces.japonicus.b.IME2 ---------N G NEIIE----- Site 3322
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------D L QKGKD----- Site 3322
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------P V VKEQS----- Site 3322
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a -----IYSFP M DEPIS----- Site 4001
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------D L ERYKD----- Site 3322
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------E T KRCDT----- Site 3322
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------Q F HDIDD----- Site 3322
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de RDGFIEKFIP E LRAKL----L Site 3401
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ----VWYDPS E VEAPP----- Site 4868
Candida.albicans.IME2 ---------E S ITMMD----- Site 3322
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------D D PQACS----- Site 3322
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------E N PQPRD----- Site 3322
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -----QYHDP D DEPVA----- Site 4558
Kluyveromyces.lactis.IME2 ---------K L PKVQK----- Site 3822
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina SPWAPSGDCA M ESPPP----A Site 4258
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ----VWYDPA E VEAPP----- Site 4546
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------Q Y HDPED----- Site 3322
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - ----------  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------Q Y HDPDD----- Site 3322
Amphimedon.queenslandica.CDK1 ---------- - ----E-----  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------S F QEAQI----- Site 3322
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------E L PLPID----- Site 3322
Neurospora.crassa.IME2 ---------P L RPKSS----- Site 4488
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------D S SSSGH----- Site 3322
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------K E ESDAE----- Site 3322
Hydra.magnipapillata.CDK1 ---------D L NHNM------ Site 3322
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------EKP L PCEPE----- Site 3633
Ashbya.gossypii.IME2 ---------Q E TKQPP----- Site 3465
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------I Q PHPGS----- Site 3322
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------K S VPRPL----- Site 3322
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------E L KLDDG----- Site 3322
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------K F HNPSS----- Site 3322
Schizosaccharomyces.pombe.b.IME2 ---------L P PSASK----- Site 4690
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------Q Y YDPSD----- Site 3322
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GIPLQAGTAQ F GCGDAFHQTL Site 3574
Schizosaccharomyces.pombe.CDK1 ---------D F H--------- Site 3322
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------D V QVQIP----- Site 3322
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------A T RGLPS----- Site 3259
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ----VWYDPS E AEAPP----- Site 4868
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------P G HSLAP----- Site 3322
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---------D T LRSHP----N Site 4652
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------S P EPSPA----- Site 3322
Yarrowia.lipolytica.IME2 ---------N P HGDPP----- Site 3576
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------E S DIPVS----- Site 3322
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------D V TMPVP----- Site 3322
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------E L NEDLL----- Site 3322
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------E L RDPST----- Site 3322
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------E L RDPNT----- Site 3322
Species Residue at Site 2238
in 'muscle'
msaprobs

The residue for every species at site 2238 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -----QKEER V PSQPP----- Site 3782
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------E G RLRYH----- Site 3322
Scheffersomyces.stipitis.SKY1 ---------D A LGLEN----- Site 3322
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - DFCPP-----  

Generated by PhyloBot at 18:35, July 4th 2020
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