cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 2010 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 2010 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 2010 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 2010 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---SPPW--- N GA-------- Site 3102
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---SIQE--- A KD-------- Site 3102
Danio.rerio.CDK1 ----PPL--- D ED-------- Site 3102
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ----PHV--- H PE-------- Site 3102
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -----KL--- N AT-------- Site 3102
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -----TL--- S ET-------- Site 3102
Candida.guilliermondii.IME2 -----HS--- Y PF-------- Site 3102
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - ----------  
Chlamydomonas.reinhardtii.LF4 -----HV--- N PE-------- Site 3102
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---PHNC--- T KN-------- Site 3102
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -----IL--- F RT-------- Site 3302
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ----LSV--- L DD-------- Site 3151
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---EKHKVKP D SK-------- Site 3102
Schizosaccharomyces.octosporus.b.IME2 ----ANC--- D DM-------- Site 3102
Candida.albicans.MAPK3..Extracellular.signal.regul TGGRTNI--- N PL-------- Site 3102
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- S PE-------- Site 3102
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - ----------  
Suberites.domuncula.JNK..Stress.activated.protein. TPEDKAK--- T RH-------- Site 3102
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- D SA-------- Site 3102
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -LSQDAE--- H EL-------- Site 3102
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -TSEAEE--- H HQ-------- Site 3102
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -----TY--- D TS-------- Site 3102
Homo.sapiens.HIPK1..Homeodomain.interacting.protei MLAEKAD--- R RE-------- Site 3102
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ----PSI--- S YP-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -----TI--- D ED-------- Site 3102
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- S PE-------- Site 3102
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ----PNA--- D AL-------- Site 3102
Strongylocentrotus.purpuratus.CDK1 -----ML--- N KD-------- Site 3102
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -RELFER--- E GY-------- Site 3107
Drosophila.melanogaster.CDK1 ---------- D AN-------- Site 3102
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- V RE-------- Site 3121
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- E MF-------- Site 3200
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---PEAE--- A KE-------- Site 3102
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ----PRL--- D TD-------- Site 3102
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ------F--- I PH-------- Site 3102
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SEHNKLK--- A SQ-------- Site 3102
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 -----KL--- S EV-------- Site 3102
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SEHNKLK--- A SQ-------- Site 3102
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ----PRA--- S PQ-------- Site 3102
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---SSQA--- T HE-------- Site 3102
Bombus.terrestris.CDK1 -----SF--- D SD-------- Site 3102
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -EWSQEE--- A AG-------- Site 3102
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar -----KL--- S AS-------- Site 3102
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SEHNKLK--- A SQ-------- Site 3102
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ----SFI--- P SA-------- Site 3102
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ------L--- S PQ-------- Site 3102
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---KQPL--- P AE-------- Site 3102
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G CDHSLKD--- A KE-------- Site 3102
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- F RT-------- Site 3302
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - ----------  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO LLAEKTD--- R RE-------- Site 3102
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- S PE-------- Site 3102
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---SSQA--- T HE-------- Site 3102
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ----PNI--- S YP-------- Site 3102
Homo.sapiens.HIPK3..Homeodomain.interacting.protei LLAEKAD--- R RE-------- Site 3102
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---GALL--- S DQ-------- Site 3102
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- N GL-------- Site 3102
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -TSEAED--- H HQ-------- Site 3102
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---GALL--- S DQ-------- Site 3102
Naegleria.gruberi.LF4 -----NV--- S KD-------- Site 3102
Saccharomyces.bayanus.IME2 ---SSSQ--- L SD-------- Site 3102
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- S PE-------- Site 3102
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -----NV--- N PQ-------- Site 3102
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ----TAA--- S DE-------- Site 3102
Dictyostelium.discoideum.DYRK1..Probable.serine.th GPQSRRK--- N EP-------- Site 3066
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos GPGGRRA--- G EP-------- Site 3066
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---KGCD--- D PL-------- Site 3102
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- N SV-------- Site 3102
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -----PD--- T PP-------- Site 3099
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- E KD-------- Site 3102
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ----KTY--- D SS-------- Site 3102
Aspergillus.nidulans.IME2 --PAPQW--- P AA-------- Site 3102
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ----DSV--- P DE-------- Site 3102
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se IASPDDK--- N HE-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. -----NA--- S SE-------- Site 3102
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ----PPL--- D ED-------- Site 3102
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SEHNKLK--- A SQ-------- Site 3102
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---HKRM--- P PE-------- Site 3102
Penicillium.marneffei.IME2 ---GPHW--- P QS-------- Site 3102
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ----IGA--- N PL-------- Site 3102
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ----PEV--- N SE-------- Site 3102
Drosophila.melanogaster.MAK ----SRC--- S QN-------- Site 3102
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH PTSTDEEFII R QE-------- Site 3102
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr PEDQRKK--- V HQ-------- Site 3102
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ----SFI--- P SA-------- Site 3102
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ----------  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ----PWL--- S EA-------- Site 3102
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SEHNKLK--- A SQ-------- Site 3102
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SERDKIK--- T SQ-------- Site 3102
Homo.sapiens.CLK1..Dual.specificity.protein.kinase MLSQDVE--- H ER-------- Site 3102
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis LEGWNEV--- P DE-------- Site 3102
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- F RT-------- Site 3302
Candida.parapsilosis.IME2 -----DA--- G RE-------- Site 3102
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p YQTVKNR--- D PQ-------- Site 3102
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---KSRT--- P PE-------- Site 3102
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. SDRDKLK--- T SQ-------- Site 3102
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- S PE-------- Site 3102
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a -----DV--- N SE-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ----PRL--- D SD-------- Site 3102
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- S PE-------- Site 3102
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ----GGT--- N QK-------- Site 3102
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ----PNA--- S DL-------- Site 3102
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos GPGGRRA--- G EP-------- Site 3066
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- T PE-------- Site 3102
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---RSKT--- P ED-------- Site 3102
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --KAKDV--- P AE-------- Site 3102
Candida.orthopsilosis.IME2 -----DA--- G RE-------- Site 3102
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ----SAA--- G DD-------- Site 3102
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ADNARLT--- A AK-------- Site 3102
Debaryomyces.hansenii.IME2 -----DS--- V SE-------- Site 3102
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---SKRM--- P PD-------- Site 3102
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ----GGR--- D KA-------- Site 3102
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE -----CL--- T GH-------- Site 3102
Caenorhabditis.briggsae.CDK1 KSGNYLM--- D ED-------- Site 3102
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- S PE-------- Site 3102
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -----DA--- S PQ-------- Site 3102
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---KGCG--- D YL-------- Site 3102
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ----PDI--- D DM-------- Site 3102
Monosiga.brevicollis.CDK1 ---------- D ED-------- Site 3102
Saccharomyces.cerevisiae.SKY1 ---SKDE--- A KE-------- Site 3102
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ----PGA--- N PL-------- Site 3102
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -----RL--- P PL-------- Site 3102
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---RIRT--- P TE-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - ----------  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---PPDT--- S PE-------- Site 3102
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ----PKL--- P EA-------- Site 3102
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ----PTI--- S DT-------- Site 3102
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- N SV-------- Site 3102
Ajellomyces.capsulatus.CDK1 ---------- E RN-------- Site 3102
Dictystelium.discoideum.MAPK3..Extracellular.signa -----KA--- N PD-------- Site 3102
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ----TDI--- D EL-------- Site 3102
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ----PWL--- S EA-------- Site 3102
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SEHNKLK--- A SQ-------- Site 3102
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. -----RA--- S PQ-------- Site 3102
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---SGEA--- T HE-------- Site 3102
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SEHNKLK--- A SQ-------- Site 3102
Saccharomyces.cerevisiae.CDK1 ----PSL--- D PR-------- Site 3102
Lodderomyces.elongisporus.IME2 ----CIK--- D NS-------- Site 3102
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ----IGA--- N PQ-------- Site 3102
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -MMETEE--- H HQ-------- Site 3102
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- S GV-------- Site 3102
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ----KKE--- T QE-------- Site 3102
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ----KNC--- C DD-------- Site 3102
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -LCHDEE--- H EK-------- Site 3102
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U MLVEKAD--- R RE-------- Site 3102
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -----NI--- S YS-------- Site 3102
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --KSSKT--- P PE-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 KTGKHLL--- D DT-------- Site 3102
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ----PEM--- E ES-------- Site 3102
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---SNSS--- E ---------- Site 3104
Salmo.salar.CDK1 ----PPL--- D DD-------- Site 3102
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ----IAA--- G DD-------- Site 3102
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -----DV--- S PQ-------- Site 3102
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- E KD-------- Site 3102
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---RPRT--- P PE-------- Site 3102
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ELHDRVL--- D VQ-------- Site 4627
Aspergillus.fumigatus.IME2 DGASFYG--- E HP-------- Site 3111
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan EKHKVKP--- D SK-------- Site 3102
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -LSHGRE--- H HH-------- Site 3102
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ----PTA--- N PQ-------- Site 3102
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S -RLSQQT--- T DD-------- Site 3102
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma MLVEKAD--- R RE-------- Site 3102
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ----PKS--- D SK-------- Site 3102
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ----PRL--- D SE-------- Site 3102
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -----WL--- S EA-------- Site 3102
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ----PNL--- S YQ-------- Site 3102
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S NQNSRRK--- A SD-------- Site 3102
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -----NA--- N PI-------- Site 3102
Candida.glabrata.IME2 ---CSNQ--- L TD-------- Site 3102
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -----NA--- S NE-------- Site 3102
Schizosaccharomyces.pombe.IME2 ---SPPW--- N LA-------- Site 3102
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P INPNVQI--- N PL-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -----RL--- S SK-------- Site 3102
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom GGAVSRLSFP D RE-------- Site 3045
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ----RIL--- F RT-------- Site 3299
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ----PRL--- D TE-------- Site 3102
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ----SNV--- Q PV-------- Site 3102
Branchiostoma.floridae.CDK1 -----SL--- E PE-------- Site 3102
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -TSEAED--- H HR-------- Site 3102
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---SRSV--- P LD-------- Site 3102
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -----RN--- L PV-------- Site 3102
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---RVHT--- P AE-------- Site 3102
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -----NA--- S SE-------- Site 3102
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -LQDSLE--- H VQ-------- Site 3102
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos GPGGRRA--- G ES-------- Site 3066
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ----PPL--- D ED-------- Site 3102
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ----PGA--- D RQ-------- Site 3102
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ----IGA--- N PL-------- Site 3102
Lachancea.thermotolerans.SKY1 -AA--ED--- A ET-------- Site 3102
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ----PGI--- S RE-------- Site 3102
Dictyostelium.discoideum.CDK1 -----RC--- E PL-------- Site 3102
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ----TNA--- S PQ-------- Site 3102
Xenopus.tropicalis.IME2 ----PPL--- D DD-------- Site 3102
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U MLAEKAD--- R RE-------- Site 3102
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- S PE-------- Site 3102
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -----PL--- D ED-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -----NL--- D RH-------- Site 3102
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --DRLGG--- V PE-------- Site 3102
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD -----SA--- S VD-------- Site 3102
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos GPGGRRA--- G ES-------- Site 3066
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---RPRT--- P PE-------- Site 3102
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---RIRT--- P AE-------- Site 3102
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ----PWW--- N SD-------- Site 3101
Encephalitozoon.cuniculi.CDK1 -----RG--- D PD-------- Site 3102
Saccharomyces.kluyveri.IME2 ---SNPL--- L RK-------- Site 3102
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -LCHDEE--- H EK-------- Site 3102
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ----PNA--- D SK-------- Site 3102
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --NRLGR--- V PE-------- Site 3102
Cryptococcus.neoformans.IME2 ---NDSV--- P QS-------- Site 3102
Homo.sapiens.HIPK4..Homeodomain.interacting.protei GSVASRLTFP D RE-------- Site 3045
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -----EW--- P QE-------- Site 3075
Candida.lusitaniae.IME2 -----SS--- Y HE-------- Site 3102
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom MLAEKAD--- R RE-------- Site 3102
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -RHKIKP--- D SK-------- Site 3102
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ----PDT--- S PQ-------- Site 3102
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ----VNI--- S SQ-------- Site 3102
Gallus.gallus.CDK2 ----PPL--- D EE-------- Site 3102
Emericella.nidulans.CDK1 ----PGL--- E ED-------- Site 3102
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ------L--- S PQ-------- Site 3102
Homo.sapiens.CDK1 ---------- D EN-------- Site 3102
Candida.albicans.CDK1 ----PSL--- D AN-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- S TE-------- Site 3102
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ----PGA--- D RQ-------- Site 3102
Mus.musculus.ICK..Serine.threonine.protein.kinase. -----NA--- S SE-------- Site 3102
Saccharomyces.castelli.IME2 ----LPE--- L YD-------- Site 3102
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -MVQSLD--- H DQ-------- Site 3102
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ----IAA--- G DD-------- Site 3102
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --NKLSY--- V NH-------- Site 3102
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---HKRL--- K DE-------- Site 3102
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ----PDP--- K TNMDAVDAYE Site 3072
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ----SAA--- G DD-------- Site 3102
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho -----KAYVR D PY-------- Site 3102
Homo.sapiens.HIPK2..Homeodomain.interacting.protei MLVEKAD--- R RE-------- Site 3102
Acyrthosiphon.pisum.CDK1 ------S--- D KN-------- Site 3102
Candida.tropicalis.CDK1 ---QHPD--- G NA-------- Site 3102
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ERHKIKP--- D SK-------- Site 3102
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---RPRT--- S PE-------- Site 3102
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- S PE-------- Site 3102
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ----PRL--- D SD-------- Site 3102
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- S PE-------- Site 3102
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ----PRL--- D SE-------- Site 3102
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA -----KA--- N PQ-------- Site 3102
Candida.albicans.SSN3..Serine.threonine.protein.ki GNNQNSE--- K ---------- Site 3104
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ----PHA--- P PE-------- Site 3102
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---RTRT--- P AD-------- Site 3102
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -----RA--- S KK-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de -----TF--- G KE-------- Site 3102
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- S PE-------- Site 3102
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U LMAEKAD--- R RE-------- Site 3102
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---GALL--- S DQ-------- Site 3102
Candida.dubliniensis.IME2 ---QHPD--- S LA-------- Site 3102
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SERDKIK--- T SQ-------- Site 3102
Aspergillus.niger.IME2 --QAPQW--- P AA-------- Site 3102
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ----LGA--- N PQ-------- Site 3102
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - GL--------  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --NKLSY--- V NH-------- Site 3102
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- S PE-------- Site 3102
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty PGHSVED--- Y SK-------- Site 3102
Schizosaccharomyces.japonicus.IME2 ---SPPW--- N NT-------- Site 3102
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ADSSRLT--- G AQ-------- Site 3102
Gallus.gallus.CDK1 ---------- D ED-------- Site 3102
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ----PKL--- N AT-------- Site 3102
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ----RKA--- D AN-------- Site 3102
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ----TGM--- S AA-------- Site 3102
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---RVHT--- P AE-------- Site 3102
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ----TNA--- S PL-------- Site 3102
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ TSETKLA--- V PE-------- Site 3102
Kluyveromyces.waltii.IME2 ---ANPH--- L QE-------- Site 3102
Debaryomyces.hansenii.SKY1 ---SLAD--- A VE-------- Site 3102
Saccharomyces.cerevisiae.IME2 ---SSSQ--- L SD-------- Site 3102
Schizosaccharomyces.japonicus.b.IME2 ----DEW--- H GA-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ----PGI--- D EQ-------- Site 3102
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- S PE-------- Site 3102
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ----PGI--- S RE-------- Site 3102
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ----TDI--- D EL-------- Site 3102
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ----KAE--- D PD-------- Site 3102
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ----RYA--- N PL-------- Site 3102
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ----PKL--- N GL-------- Site 3102
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act SDHNKLK--- A SQ-------- Site 3102
Candida.albicans.IME2 ---QHPD--- S LA-------- Site 3102
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -----EI--- D AM-------- Site 3102
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ----PHI--- T DN-------- Site 3102
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ----IGA--- N PL-------- Site 3102
Kluyveromyces.lactis.IME2 ----NPQ--- L ED-------- Site 3102
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ----PGA--- D RQ-------- Site 3102
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SEHNKLK--- A SQ-------- Site 3102
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ----RGA--- N PL-------- Site 3102
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- F RT-------- Site 3302
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ----HGA--- N PL-------- Site 3102
Amphimedon.queenslandica.CDK1 ---------- D TL-------- Site 3102
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ----SDV--- H PV-------- Site 3102
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- D RD-------- Site 3102
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---QEKT--- S EM-------- Site 3102
Neurospora.crassa.IME2 --QTPQW--- P AS-------- Site 3102
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -----RL--- N SK-------- Site 3102
Dictyostelium.discoideum.DYRK2..Probable.serine.th ----RSG--- D ED-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -----EM--- E ES-------- Site 3102
Hydra.magnipapillata.CDK1 -----ML--- D EN-------- Site 3102
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -----WL--- S EA-------- Site 3102
Ashbya.gossypii.IME2 -----PQ--- L ES-------- Site 3102
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- E KD-------- Site 3102
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---KGCD--- D YL-------- Site 3102
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ----KKE--- D DQ-------- Site 3102
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---PASV--- P PD-------- Site 3102
Schizosaccharomyces.pombe.b.IME2 ----QNC--- P EG-------- Site 3102
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ----PNA--- D SK-------- Site 3102
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom LLAEKAD--- R RE-------- Site 3102
Schizosaccharomyces.pombe.CDK1 -----NG--- E ED-------- Site 3102
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -LSEAEE--- H HQ-------- Site 3102
Saccoglossus.kowalevskii.CDK1 ----GSL--- D MD-------- Site 3102
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -----NL--- F HR-------- Site 3103
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac SEHNKLK--- A SQ-------- Site 3102
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -----SL--- G PE-------- Site 3102
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable KQHGRIL--- D IL-------- Site 4614
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -----NL--- E PE-------- Site 3102
Yarrowia.lipolytica.IME2 ---CNPE--- H AS-------- Site 3102
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ----GGR--- D KH-------- Site 3102
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ----PPL--- D ED-------- Site 3102
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K KQLTPSL--- G PDDEEDIDDK Site 3072
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ----KKA--- D AD-------- Site 3102
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---SRSV--- P LD-------- Site 3102
Species Residue at Site 2010
in 'muscle'
msaprobs

The residue for every species at site 2010 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -----VE--- D YS-------- Site 3099
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---SSQA--- T HE-------- Site 3102
Scheffersomyces.stipitis.SKY1 -PM--QD--- A MD-------- Site 3102
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ----PKL--- N AT-------- Site 3102

Generated by PhyloBot at 17:43, July 4th 2020
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