cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1945 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1945 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1945 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 1945 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---APLNLRE L F--------- Site 3052
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -LFSVLTEKY K F--------- Site 3066
Danio.rerio.CDK1 -KWARQDLSK V V--------- Site 3052
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge PPYRRQSFQE K F--------- Site 3052
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---ATMSLVN V V--------- Site 3052
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---AETNWSE Q V--------- Site 3052
Candida.guilliermondii.IME2 ---TGIPIDE F I--------- Site 3052
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---DYSYLKR L F--------- Site 2837
Chlamydomonas.reinhardtii.LF4 ---EGSGVAK L I--------- Site 3052
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g -NVRPHTLES V M--------- Site 3052
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---DYMYLRQ L F--------- Site 3297
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---DYEGYRM L L--------- Site 3146
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho NTYTNCSLIK Y M--------- Site 3044
Schizosaccharomyces.octosporus.b.IME2 ---RPYPLRK L L--------- Site 3052
Candida.albicans.MAPK3..Extracellular.signal.regul ---KKIPFSE L F--------- Site 3052
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -KFINADNRH L V--------- Site 3092
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---DYDYLRS I F--------- Site 3104
Suberites.domuncula.JNK..Stress.activated.protein. -RYAGKSWKD L F--------- Site 3052
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---NCKPLKS Y M--------- Site 3052
Aedes.aegypti.CDK1 -QNNLTSQVK N L--------- Site 3092
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---RCKPLKE F M--------- Site 3052
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---NCKPLRR Y L--------- Site 3052
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---DSKDLTM V L--------- Site 3052
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---LKTPEEH E L--------- Site 2970
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar -E-SMEPLEM K F--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---KAIPLGE I L--------- Site 3052
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -NFIHSENRH L V--------- Site 3092
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---PNVPWAK L F--------- Site 3052
Strongylocentrotus.purpuratus.CDK1 ---PQ-DFTK I V--------- Site 3052
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---DYSFLRH V F--------- Site 3099
Drosophila.melanogaster.CDK1 -TNQLTNQLK N L--------- Site 3092
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 YQQVISMFRE L F--------- Site 3119
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---DFLYLRK L L--------- Site 3197
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -LDRLLIDKY K L--------- Site 3066
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d -CYLPQPLIN H A--------- Site 3052
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. -SSLSEAIPK L V--------- Site 3099
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET -KYAGLTFPK L F--------- Site 3052
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---EREPLER R Y--------- Site 3052
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U -KYAGLTFPK L F--------- Site 3052
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---PRKDFTQ L F--------- Site 3052
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo HKQPSLPVLY T L--------- Site 3048
Bombus.terrestris.CDK1 ---PR-PLDE V V--------- Site 3052
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---LFEVLVE K Y--------- Site 3064
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---EAESLDR R Y--------- Site 3052
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. -KYAGYSFEK L F--------- Site 3052
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d KKQYRRRLRE E F--------- Site 3052
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -KGSGIPLLT A N--------- Site 3075
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ANAKATPWEN V F--------- Site 3052
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -NSKGIPWSS V F--------- Site 3052
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---DYMYLRQ L F--------- Site 3297
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---DYAYLKR I F--------- Site 2706
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO -LKTTEEHEA E T--------- Site 3019
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -KFINADNQH L V--------- Site 3092
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl HKQPSLPVLY T L--------- Site 3048
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 DPEDMEPLEL K F--------- Site 3052
Homo.sapiens.HIPK3..Homeodomain.interacting.protei RKYIFNSLDD V A--------- Site 2991
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O -EHPYNNLRK R F--------- Site 3052
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d -QTLDRRYLG I I--------- Site 3092
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---NCKPLRR Y L--------- Site 3052
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O -EHPYNNLRK R F--------- Site 3052
Naegleria.gruberi.LF4 ---AGKGLKA M I--------- Site 3052
Saccharomyces.bayanus.IME2 -DVEGSSLDH L L--------- Site 3052
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -NFIHSENRH L V--------- Site 3092
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---RKKDLRI L L--------- Site 3052
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -DHPATPFKQ L F--------- Site 3052
Dictyostelium.discoideum.DYRK1..Probable.serine.th -EFCKKKLSE I I--------- Site 3052
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -LRRTKELRK D Y--------- Site 2985
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---ESREWGN A L--------- Site 3052
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d -QSLERRYLG I L--------- Site 3092
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a -SRPQQTLDA L L--------- Site 3052
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---DSKDLTM V V--------- Site 3052
Aspergillus.nidulans.IME2 -KMAPHSMES I L--------- Site 3052
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi HPKDCTSNSE G W--------- Site 3089
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se AGLRAPDTQR L Y--------- Site 3044
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---PI-NLKT L I--------- Site 3052
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -KWARQDFSK V V--------- Site 3052
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. -KYAGLTFPK L F--------- Site 3052
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -QIKAHPWHK I F--------- Site 3052
Penicillium.marneffei.IME2 ---PH-SMSS I L--------- Site 3052
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---PKRNFAD V F--------- Site 3052
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---VKRPLRK L L--------- Site 3052
Drosophila.melanogaster.MAK -DCIKVPLSS V V--------- Site 3052
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH FSKPTKDIRS R L--------- Site 3060
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -NPTKDLLAD L I--------- Site 3061
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de KKQYRRRLRE E F--------- Site 3052
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -LAKCVGIDE N S--------- Site 3102
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -KQPYNNLKH K F--------- Site 3052
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin -KYAGLTFPK L F--------- Site 3052
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a -KYPGIKFEE L F--------- Site 3052
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---EHSSAGR Y V--------- Site 2989
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -KGDSNSCEH C F--------- Site 3079
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---DYMYLRQ L F--------- Site 3297
Candida.parapsilosis.IME2 ---RGLTRTQ I L--------- Site 3052
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -SFEVRYWNN L L--------- Site 3043
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen -QIKAHPWTK V F--------- Site 3052
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. -KYPGIKFEE L F--------- Site 3052
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -RFVHSENQH L V--------- Site 3092
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -CKPLKERQH F Y--------- Site 3073
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---VKRPLRK L L--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d -KYRAEALLS H A--------- Site 3052
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -RFVHSENQH L V--------- Site 3092
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---NLEAWYQ S I--------- Site 3052
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. -KIPKKEFSL L F--------- Site 3052
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -LRRTKELRK D Y--------- Site 2985
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -RFIHAENQH L V--------- Site 3092
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -SIKACQWRK V F--------- Site 3052
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---KANPWPR V F--------- Site 3052
Candida.orthopsilosis.IME2 ---RGFTRAQ I L--------- Site 3052
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot -PFPGTPLEH I F--------- Site 3052
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str -KYQPVPFET L F--------- Site 3052
Debaryomyces.hansenii.IME2 ---DGVQICN L I--------- Site 3052
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -QIKAHPWTK V F--------- Site 3052
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin -RDNLSVWYH S S--------- Site 3052
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --FNLNKLAE L S--------- Site 3067
Caenorhabditis.briggsae.CDK1 ---ENFLRDK F Y--------- Site 3067
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -RFVHSDNQH L V--------- Site 3092
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de -EQAPVPLEE V L--------- Site 3052
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -PPGSKDWAT A L--------- Site 3052
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---PAQPIEK F V--------- Site 3052
Monosiga.brevicollis.CDK1 -KGCLNDSVK N L--------- Site 3092
Saccharomyces.cerevisiae.SKY1 -LEDVLTEKY K F--------- Site 3066
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP TPRPGVDFKT L F--------- Site 3052
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---AVEPLEK R L--------- Site 3052
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---KSHPWQK V F--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---DYTYLRR L L--------- Site 3300
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GSRPRQTLDA L L--------- Site 3052
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d -DAEAEPLES R Y--------- Site 3052
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---PYNNLRE L V--------- Site 3052
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d -QSLERRYLG I L--------- Site 3092
Ajellomyces.capsulatus.CDK1 -REDTRKLVP G L--------- Site 3092
Dictystelium.discoideum.MAPK3..Extracellular.signa ---PKVNFAN M F--------- Site 3052
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---SAQPIEK F V--------- Site 3052
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -KQPYNNLKH K F--------- Site 3052
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac PKYAGYSFEK L F--------- Site 3052
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---PKKDFTQ L F--------- Site 3052
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -PKDFCPHLC K Y--------- Site 3103
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri KP-PSLSVLY M L--------- Site 3048
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha -KYAGLTFPK L F--------- Site 3052
Saccharomyces.cerevisiae.CDK1 -QWRRKDLSQ V V--------- Site 3052
Lodderomyces.elongisporus.IME2 ---PGTNIHE I V--------- Site 3052
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -QMPKRNFAD V F--------- Site 3052
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---NCKPLRR Y M--------- Site 3052
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar -QSLERRYLG I L--------- Site 3092
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -QIRPIPLNR I F--------- Site 3052
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D -RDRRYSLDE M M--------- Site 3052
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -RRRCKPLKE F M--------- Site 3052
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U -LKTPEDHEN E T--------- Site 2972
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d -E-DMETLEL K F--------- Site 3052
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen -QIKAHPWTK V F--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---ENFLRDK F Y--------- Site 3067
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -PRGPRPVQS V V--------- Site 3052
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---PLAPWYH A R--------- Site 3067
Salmo.salar.CDK1 -KWARQELSK V V--------- Site 3052
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -SFPGTPLHL I F--------- Site 3052
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d -EQVPMPLEE V L--------- Site 3052
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen -QIKAHPWTK V F--------- Site 3052
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable -EVQLRAMKR L L--------- Site 4595
Aspergillus.fumigatus.IME2 -FVLVTELER I A--------- Site 3075
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan -TYTNCSLIK Y M--------- Site 3044
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---KCKPLRQ Y L--------- Site 3052
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha -KMPKKDLSV L F--------- Site 3052
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S AGPRAPNLQS L Y--------- Site 3044
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma -LKTPDDHEA E T--------- Site 2972
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---TKVAWAK L F--------- Site 3052
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d -KYKPQPLIN H A--------- Site 3052
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -KQPYNNLKH K F--------- Site 3052
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --QEMEPLEL K Y--------- Site 3052
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S PRYTGYSFDR L F--------- Site 3052
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---EKRRIST V F--------- Site 3052
Candida.glabrata.IME2 ---EGSSLEK L L--------- Site 3052
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---VPINLKT L I--------- Site 3052
Schizosaccharomyces.pombe.IME2 ---APLDFGD L F--------- Site 3052
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---KKIPFQD L F--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---AITSWSQ I V--------- Site 3052
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom LKSSADYLAE T K--------- Site 2968
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -APDYMYLRQ L F--------- Site 3294
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d -RYLPQPLLS H A--------- Site 3052
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --EDMETLEE K F--------- Site 3052
Branchiostoma.floridae.CDK1 ---RQ-DVTK L F--------- Site 3052
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---NCKPLRR Y L--------- Site 3052
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH -QIRPQPLSR V F--------- Site 3052
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD -QTMLEDHFR I L--------- Site 3074
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -QIKAHPWNK V F--------- Site 3052
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. -QCVPNNLKT L I--------- Site 3052
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---NCKPLKS Y M--------- Site 3052
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -LKKTKDGKR E Y--------- Site 2985
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -KWARQDFSK V V--------- Site 3052
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---QPVPWET V Y--------- Site 3052
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. TQMPKMNFAN V F--------- Site 3052
Lachancea.thermotolerans.SKY1 -LKDVLMEKY R F--------- Site 3066
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a MTEPHRPLTQ L L--------- Site 3052
Dictyostelium.discoideum.CDK1 ---GQ-PYNK I F--------- Site 3052
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. -ELEKKDFAS V L--------- Site 3052
Xenopus.tropicalis.IME2 -KWVRQDFSK V V--------- Site 3052
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---LKAPDEH E M--------- Site 2970
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -RFVHSENQH L V--------- Site 3092
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---IRQDFSK V V--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---RK-EMKE I V--------- Site 3052
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. PPPKPQSLQI V W--------- Site 3052
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---NPRSLSD M Y--------- Site 3052
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -LKKTKDGKR E Y--------- Site 2985
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen -QIKAHPWTK V F--------- Site 3052
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---KPHPWSK V F--------- Site 3052
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---PYNNLKS K F--------- Site 3052
Encephalitozoon.cuniculi.CDK1 -VWDPVDLKT I F--------- Site 3052
Saccharomyces.kluyveri.IME2 ---EGVNIEV L L--------- Site 3052
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---RCKPLKE F M--------- Site 3052
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---NKVPWNR L F--------- Site 3052
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. -LPTPRSLHV V W--------- Site 3052
Cryptococcus.neoformans.IME2 ---KPVRFRS L F--------- Site 3052
Homo.sapiens.HIPK4..Homeodomain.interacting.protei LKSSADYLAE T K--------- Site 2968
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---LLEVLVE K Y--------- Site 3064
Candida.lusitaniae.IME2 ---IGNSIHH I L--------- Site 3052
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---LKTPEEH E L--------- Site 2970
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A -NYANCSLVK Y M--------- Site 3044
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep -ENPPIPLEE I V--------- Site 3052
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --DGTEPLDM R F--------- Site 3052
Gallus.gallus.CDK2 -KWARQDLGK V V--------- Site 3052
Emericella.nidulans.CDK1 -KWKREDIQN V V--------- Site 3052
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. -KGSGIPLLT T N--------- Site 3075
Homo.sapiens.CDK1 -PGSLASHVK N L--------- Site 3092
Candida.albicans.CDK1 ----KKPLSE A V--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -RFVHSENQH L V--------- Site 3092
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---QPVPWET V Y--------- Site 3052
Mus.musculus.ICK..Serine.threonine.protein.kinase. -QCIPNNLKT L I--------- Site 3052
Saccharomyces.castelli.IME2 ---EGISLDR F I--------- Site 3052
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---HCKPLKQ Y M--------- Site 3052
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -SFPGVPLQH I F--------- Site 3052
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -VYSSKSLRQ A W--------- Site 3052
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly -QIKAHPWSK V F--------- Site 3052
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -LHDRMSIEP Q L--------- Site 3067
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli -LFPGTPLEH I F--------- Site 3052
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho VKGQKRKVKD R L--------- Site 3052
Homo.sapiens.HIPK2..Homeodomain.interacting.protei -LKTPDDHEA E T--------- Site 2972
Acyrthosiphon.pisum.CDK1 -ARLIEEFLP E L--------- Site 3092
Candida.tropicalis.CDK1 -AEPGMNIED V V--------- Site 3052
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin -TYSTCSLAK Y M--------- Site 3044
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---KAHPWNR V F--------- Site 3052
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -RFVHSENQH L V--------- Site 3092
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de -KYRAEALLS H A--------- Site 3052
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -KFINADNQH L V--------- Site 3092
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d -KYKPQPLIN H A--------- Site 3052
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---PKKDLSV L F--------- Site 3052
Candida.albicans.SSN3..Serine.threonine.protein.ki ---NLSNWFK L I--------- Site 3052
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF -QKSGTGIEK L I--------- Site 3052
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---PH-PWSK V F--------- Site 3052
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---PHRDFST L F--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---PRTLETA F F--------- Site 3067
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -RFVHSENQH L V--------- Site 3092
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U -KYIFNNLDE I V--------- Site 2991
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d -EYPYNNLRK R F--------- Site 3052
Candida.dubliniensis.IME2 -DETGTTIEE I V--------- Site 3052
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a PKYPGIKFEE L F--------- Site 3052
Aspergillus.niger.IME2 -KMAPHSMES I L--------- Site 3052
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---PKMNFED V F--------- Site 3052
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d -KNARKKYPK L N--------- Site 3099
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -LYSSKNLRQ A W--------- Site 3052
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -RFVHSENQH L V--------- Site 3092
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -APGARKLHE I L--------- Site 3052
Schizosaccharomyces.japonicus.IME2 ---MPLSFHE L F--------- Site 3052
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. -RYQATPFEV L F--------- Site 3052
Gallus.gallus.CDK1 -PGSLGTHVQ N L--------- Site 3092
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep MYPATTSLVN V V--------- Site 3052
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P -QIKPHPFNK V F--------- Site 3052
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---TGISMTS D V--------- Site 3052
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -QIKAHPWNK V F--------- Site 3052
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. -ELEKKDFAS I L--------- Site 3052
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -DFTKKSWTH F I--------- Site 3052
Kluyveromyces.waltii.IME2 ---EGTSIES I V--------- Site 3052
Debaryomyces.hansenii.SKY1 -LKDVLMEKY K F--------- Site 3066
Saccharomyces.cerevisiae.IME2 ---EGSSLDH L L--------- Site 3052
Schizosaccharomyces.japonicus.b.IME2 ---LPYPIEN L L--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---QPQPIEN V V--------- Site 3052
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -NFIHSENRH L V--------- Site 3092
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a MTEPHKPLTQ L L--------- Site 3052
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---SAQPIEK F V--------- Site 3052
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST -NIKPITLAE I F--------- Site 3052
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk -KVQKKDFGS L L--------- Site 3052
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de -VQHPKTARK K Y--------- Site 3052
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act PRYAGYSFEK L F--------- Site 3052
Candida.albicans.IME2 -DESGMSIED I V--------- Site 3052
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---TQQPVDK F V--------- Site 3052
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k TDQPYNNLKS K F--------- Site 3052
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -QMPKMNFAN V F--------- Site 3052
Kluyveromyces.lactis.IME2 ---EGKTIRD V L--------- Site 3052
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---QPVPWET V Y--------- Site 3052
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. -KYAGLTFPK L F--------- Site 3052
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. -PMPQKDLSS I F--------- Site 3052
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---DYMYLRQ L F--------- Site 3297
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. -PMPQKDLSS V F--------- Site 3052
Amphimedon.queenslandica.CDK1 -RQNLQRIVK S L--------- Site 3092
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -E-DMETLEE K F--------- Site 3052
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -RKEMKDIVP N L--------- Site 3092
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME -EYPVSQLRK H F--------- Site 3052
Neurospora.crassa.IME2 ---APHSMDT I L--------- Site 3052
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---AITSWSQ L V--------- Site 3052
Dictyostelium.discoideum.DYRK2..Probable.serine.th -TIGTKSFKD S I--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---GPRPVQS V V--------- Site 3052
Hydra.magnipapillata.CDK1 ---PQ-PFQT F L--------- Site 3052
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -KQPYNNLKH K F--------- Site 3052
Ashbya.gossypii.IME2 -EGKDISWVM C N--------- Site 3075
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -PPGSKDWGT A L--------- Site 3052
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p -QIKPIPLSR V F--------- Site 3052
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace LLRPQVPLDE I L--------- Site 3052
Schizosaccharomyces.pombe.b.IME2 ---KPYPIQK L L--------- Site 3052
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---NKVPWNR L F--------- Site 3052
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom RKYIFNSLDD I V--------- Site 2991
Schizosaccharomyces.pombe.CDK1 ---RM-DLHK V V--------- Site 3052
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---NCKPLRR Y L--------- Site 3052
Saccoglossus.kowalevskii.CDK1 ----QQDLSK V V--------- Site 3052
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---DYSYLRQ L F--------- Site 3098
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac PKYAGYSFEK L F--------- Site 3052
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---RK-GLEE I V--------- Site 3052
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable RQKVPIFITD V LLEGNMANIL Site 4552
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---TRKGLEE I V--------- Site 3052
Yarrowia.lipolytica.IME2 -AQTGQSSNS I M--------- Site 3052
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil -RDNLATWYH S A--------- Site 3052
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -KWARQDLSK V V--------- Site 3052
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -SIAFETLDY L T--------- Site 3060
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly -QIKPHPFNK V F--------- Site 3052
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk -QIRPQPLSR V F--------- Site 3052
Species Residue at Site 1945
in 'muscle'
msaprobs

The residue for every species at site 1945 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -APGARKLHE I L--------- Site 3052
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo HKQPSLPVLY T L--------- Site 3048
Scheffersomyces.stipitis.SKY1 -LKEVLMEKY K F--------- Site 3066
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep MYPATTSLVN V V--------- Site 3052

Generated by PhyloBot at 11:17, November 19th 2019
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