cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1926 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1926 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1926 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 1926 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 ---------- - -----KS---  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD Q--------- - -----WP--L  
Danio.rerio.CDK1 ---------- - -----FP--K  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ---------- - -----RQLPP  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - -----YP---  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - -----FP---  
Candida.guilliermondii.IME2 ---------- - -----EG---  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - -----KP---  
Chlamydomonas.reinhardtii.LF4 ---------- - -----PK---  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ---------- - -----LP--N  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - -----QP---  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - -----TP---  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ---------- - -----RR-NT  
Schizosaccharomyces.octosporus.b.IME2 ---------- - -----AT---  
Candida.albicans.MAPK3..Extracellular.signal.regul ---------- - -----FC---  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - -----WS--K  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - -----KP---  
Suberites.domuncula.JNK..Stress.activated.protein. ---------- - -----QP--R  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - -----KE---  
Aedes.aegypti.CDK1 ---------- - -----WT--Q  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - -----YP---  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ---------- - -----WR---  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ---------- - -----DP--E  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - -----KY---  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - -----WE--N  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---------- - -----FK---  
Strongylocentrotus.purpuratus.CDK1 ---------- - -----WT---  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - -----RP---  
Drosophila.melanogaster.CDK1 ---------- - -----WS--T  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - -----PD-YQ  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - -----KP---  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - -----WP--L  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---------- - -----FP--C  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ---------- - -----KL--S  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ---------- - -----RP--K  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ---------- - -----IK---  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ---------- - -----RP--K  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ---------- - -----QT---  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ---------- - -----GP-HK  
Bombus.terrestris.CDK1 ---------- - -----WE---  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - -----WG---  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ---------- - -----VK---  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ---------- - -----RP--K  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ---------- - -----KP-KK  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -----FK--K  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - -----IN-AN  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - -----LY--N  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - -----QP---  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - -----KP---  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ---------- - -----WR--L  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - -----WS--K  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ---------- - -----GP-HK  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ---------- - -----IP-DP  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TGMKSK---- - -----EA-RK  
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ---------- - -----FS--E  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ---------- - -----HP--Q  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - -----RE---  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ---------- - -----FS--E  
Naegleria.gruberi.LF4 ---------- - -----KR---  
Saccharomyces.bayanus.IME2 ---------- - -----LP--D  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - -----WE--N  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---------- - -----RF---  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ---------- - -----FT--D  
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - -----NV--E  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - -----WT--L  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos VLNGGRSRRG K LRG--PP--- Site 2984
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ---------- - -----HP--Q  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ---------- - -----LG--S  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - -----YP---  
Aspergillus.nidulans.IME2 ---------- - -----FP--K  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi SEDSLYKRDN D GY---WS-HP Site 3074
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ---------- - -----LR-AG  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. ---------- - -----CI---  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - -----FP--K  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ---------- - -----RP--K  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ---------- - -----FP--Q  
Penicillium.marneffei.IME2 ---------- - -----MA---  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - -----HM---  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ---------- - -----WE---  
Drosophila.melanogaster.MAK ---------- - -----YP--D  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - -----VK-FS  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - -----TI--N  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ---------- - -----KP-KK  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -----NS--L  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - -----LR--K  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ---------- - -----RP--K  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ---------- - -----RP--K  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - -----WD---  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis SGNS------ - -----FK--K  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - -----QP---  
Candida.parapsilosis.IME2 ---------- - -----FD---  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ---------- - -----LS--S  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ---------- - -----FP--Q  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ---------- - -----RP--K  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - -----WE--R  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - -----RR--C  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ---------- - -----WE---  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---------- - -----YP--K  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - -----WE--R  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ---------- - -----PP---  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ---------- - -----LP--K  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - -----WT--L  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - -----WE--R  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - -----FP--S  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ---------- - -----EI---  
Candida.orthopsilosis.IME2 ---------- - -----FD---  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ---------- - -----FK--P  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ---------- - -----RQ--K  
Debaryomyces.hansenii.IME2 ---------- - -----YT---  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ---------- - -----FP--Q  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ---------- - -----KY--R  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- - -----WS---  
Caenorhabditis.briggsae.CDK1 ---------- - -----WR---  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - -----WE--R  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ---------- - -----FK--E  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos VLLGGRSRRG K K----RG--P Site 2984
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - -----SR---  
Monosiga.brevicollis.CDK1 ---------- - -----WK--K  
Saccharomyces.cerevisiae.SKY1 ---------- - -----WP--L  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ---------- - -----SM-TP  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - -----VH---  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ---------- - -----QI---  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - -----RP---  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ---------- - -----QL-GS  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ---------- - -----VK--D  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ---------- - -----HQ---  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ---------- - -----HP--Q  
Ajellomyces.capsulatus.CDK1 ---------- - -----WK--R  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---------- - -----NQ---  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - -----SK---  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -----LR--K  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ---------- - -----NR-PK  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ---------- - -----QS---  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - -----KR--P  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ---------- - ------PHKP  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ---------- - -----RP--K  
Saccharomyces.cerevisiae.CDK1 ---------- - -----FP--Q  
Lodderomyces.elongisporus.IME2 ---------- - -----NE---  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ---------- - -----LP--Q  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - -----RE---  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ---------- - -----HP--Q  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ---------- - -----FP--Q  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ---------- - -----IQ--R  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - -----YV--R  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ---------- - -----WR--L  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ---------- - -----DP--E  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ---------- - -----FP--Q  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - -----WR---  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - -----FP--P  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ---------- - ----------  
Salmo.salar.CDK1 ---------- - -----FP--K  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ---------- - -----FK--S  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ---------- - -----FK--E  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ---------- - -----FP--Q  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable EGNVASILEV M QKFSGWP--E Site 4578
Aspergillus.fumigatus.IME2 ---------- - -----RR--F  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan ---------- - -----RN--T  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - -----KS---  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ---------- - ---------K  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ---------- - -----LR-AG  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ---------- - -----WR--L  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ---------- - -----SK---  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---------- - -----FP--K  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - -----LR--K  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ---------- - -----EP---  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ---------- - -----NR-PR  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---------- - -----KM---  
Candida.glabrata.IME2 ---------- - -----YV---  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---------- - -----QC---  
Schizosaccharomyces.pombe.IME2 ---------- - -----KM---  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ---------- - -----FC---  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - -----FP---  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ---------- - -----WQ-LK  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - -----EE--A  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---------- - -----FP--R  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ---------- - -----EP---  
Branchiostoma.floridae.CDK1 ---------- - -----WP---  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ---------- - -----FP--Q  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD ---------- - -----EK--Q  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - -----FP--Q  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. ---------- - -----WP--Q  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - -----KE---  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - -----WS--L  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - -----FP--K  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ---------- - -----PR---  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ---------- - -----SL-TQ  
Lachancea.thermotolerans.SKY1 ---------- - -----WP--L  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ---------- - -----ND-MT  
Dictyostelium.discoideum.CDK1 ---------- - -----WP---  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ---------- - ---------E  
Xenopus.tropicalis.IME2 ---------- - -----FP--K  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ---------- - -----WR---  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - -----WE--R  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - -----W----  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - -----WA---  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -----WF-PP  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD ---------- - -----PS---  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - -----WN--L  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ---------- - -----FP--Q  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ---------- - -----EL---  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ---------- - -----QQ---  
Encephalitozoon.cuniculi.CDK1 ---------- - -----FP--V  
Saccharomyces.kluyveri.IME2 ---------- - -----YV---  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - -----RR---  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ---------- - -----HK---  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---------- - -----FP--L  
Cryptococcus.neoformans.IME2 ---------- - -----KR---  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ---------- - -----WQ-LK  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - -----WG---  
Candida.lusitaniae.IME2 ---------- - -----YA---  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ---------- - -----WR---  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A ---------- - -----RS--N  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ---------- - -----FK--E  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ---------- - -----EP---  
Gallus.gallus.CDK2 ---------- - -----FP--K  
Emericella.nidulans.CDK1 ---------- - -----FP--K  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ---------- - -----FK--K  
Homo.sapiens.CDK1 ---------- - -----WK--P  
Candida.albicans.CDK1 ---------- - -----WK---  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - -----WE--R  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ---------- - -----PR---  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---------- - -----WP--Q  
Saccharomyces.castelli.IME2 ---------- - -----FV---  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - -----RK---  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ---------- - -----FK--S  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - -----FT--V  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ---------- - -----FP--Q  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS AFETFGFLQ- - -----QE--L  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ---------- - -----FK--L  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ---------- - -----EL-VK  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ---------- - -----WR--L  
Acyrthosiphon.pisum.CDK1 ---------- - -----WE--A  
Candida.tropicalis.CDK1 ---------- - -----LP--A  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ---------- - -----RS--T  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ---------- - -----QI---  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - -----WE--R  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---------- - -----YP--K  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - -----WS--K  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---------- - -----FP--K  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ---------- - -----KM---  
Candida.albicans.SSN3..Serine.threonine.protein.ki ---------- - ----------  
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ---------- - -----FP--Q  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ---------- - -----IK---  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---------- - -----HY---  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - -----SH---  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - -----WE--R  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U KTLEEHEAET G IKSKETR--K Site 2974
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ---------- - -----FS--E  
Candida.dubliniensis.IME2 ---------- - -----LP--D  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ---------- - -----NR-PK  
Aspergillus.niger.IME2 ---------- - -----FP--K  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ---------- - -----YM---  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ---------- - -----HP--K  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ---------- - -----FT--L  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - -----WE--R  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - -----YK--A  
Schizosaccharomyces.japonicus.IME2 ---------- - -----TN---  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ---------- - -----RP--R  
Gallus.gallus.CDK1 ---------- - -----WK--P  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - -----YP-MY  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ---------- - -----FP--Q  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - -----HY---  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - -----FP--Q  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ---------- - ---------E  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - -----MR--D  
Kluyveromyces.waltii.IME2 ---------- - -----YV---  
Debaryomyces.hansenii.SKY1 ---------- - -----WS--L  
Saccharomyces.cerevisiae.IME2 ---------- - -----YV---  
Schizosaccharomyces.japonicus.b.IME2 ---------- - -----DY---  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - -----FR---  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - -----WE--N  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ---------- - -----ND-MT  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - -----SK---  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ---------- - -----FP--N  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ---------- - -----LP--K  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ---------- - -----PQ--V  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ---------- - -----NR-PR  
Candida.albicans.IME2 ---------- - -----LP--D  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - -----PR---  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - -----NL-TD  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ---------- - -----LA--Q  
Kluyveromyces.lactis.IME2 ---------- - -----YV---  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ---------- - -----PR---  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ---------- - -----RP--K  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ---------- - -----LP--P  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - -----QP---  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ---------- - -----LP--P  
Amphimedon.queenslandica.CDK1 ---------- - -----WP--R  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - -----EP--E  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - -----WP--R  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ---------- - -----FT--E  
Neurospora.crassa.IME2 ---------- - -----KM---  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - -----LY--T  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - -----WR---  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - -----LR--K  
Ashbya.gossypii.IME2 ---------- - -----YV--E  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos VLVGGRSRRG K K----RG--P Site 2984
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---------- - -----FP--Q  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ---------- - -----RM-LL  
Schizosaccharomyces.pombe.b.IME2 ---------- - -----PT---  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ---------- - -----HK---  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TGMKSK---- - -----EA-RK  
Schizosaccharomyces.pombe.CDK1 ---------- - -----WK---  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - -----RE---  
Saccoglossus.kowalevskii.CDK1 ---------- - -----WP---  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - -----KP---  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ---------- - -----NR-PK  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - -----WS---  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable VTFMSNSFKS S SVALNMQ-RQ Site 4534
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - -----W----  
Yarrowia.lipolytica.IME2 ---------- - -----ID--A  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ---------- - -----KY--R  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - -----FP--K  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - -----EY--S  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ---------- - -----FP--Q  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ---------- - -----FP--Q  
Species Residue at Site 1926
in 'muscle'
msaprobs

The residue for every species at site 1926 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro TRDGYRHT-- - -----YK--A  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ---------- - -----GP-HK  
Scheffersomyces.stipitis.SKY1 ---------- - -----WG--L  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - -----YP-MY  

Generated by PhyloBot at 18:46, March 28th 2020
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