cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1900 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1900 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1900 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 1900 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 DLGII----- - -------L--  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --YFT----- - HKGDLRKI--  
Danio.rerio.CDK1 --DYK----- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --RYI----- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --DYK----- - ------PY--  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --DYR----- - ------PF--  
Candida.guilliermondii.IME2 KCGYS----- - -------F--  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ --SYF----- - HYCRSLRF--  
Chlamydomonas.reinhardtii.LF4 HMDFN----- - -------F--  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --NHS----- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 --MYL----- - NYCRSLRF--  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 --RYL----- - EIVRNLSF--  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho --EHS----- - --TLMKDF--  
Schizosaccharomyces.octosporus.b.IME2 KLGFS----- - -------F--  
Candida.albicans.MAPK3..Extracellular.signal.regul --EYI----- - -----RSL--  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 --IYL----- - NYCRSLKF--  
Suberites.domuncula.JNK..Stress.activated.protein. --LYC----- - -------E--  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --FYKGGLVW D ENSSDGRY-- Site 2978
Aedes.aegypti.CDK1 --DYK----- - -----PTF--  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --FHHDRLDW D EHSSAGRYVS Site 2978
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --FYRGRLDW D ENTSAGRYVR Site 2978
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --FFDSKGFP K NITNNRGK-- Site 2977
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --FFN----- - -RDPNLGY--  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --QFF----- - -----SGVTI  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --NYQ----- - -----ASF--  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --HFNDILGQ H SRKR------ Site 3008
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --NYL----- - -----ESL--  
Strongylocentrotus.purpuratus.CDK1 --DYK----- - -----TSF--  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca --SYF----- - HYCHSLTF--  
Drosophila.melanogaster.CDK1 --DYK----- - -----NTF--  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 --QYL----- - NYSRKLKFEE  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. --TFL----- - NYTRFLKF--  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --DYFDRHGD L KRIRRLKY-- Site 2983
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --TYS----- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --QYK----- - -IKKFVMY--  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --NYVEN--- - ----------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --VFA----- - GVR----L--  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --NYVEN--- - ----------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --SYI----- - -----QSL--  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --ILR----- - ----------  
Bombus.terrestris.CDK1 --DYT----- - -----SMF--  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --EFFTKKGD L KHITKLK--- Site 2983
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --LFA----- - GMR----L--  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --TYVEN--- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --YFNTM--- - ----------  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. -MSFD----- - -------F--  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --DVD----- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 --MYL----- - NYCRSLRF--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 --SYF----- - HYCRSLRF--  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO --FFY----- - -RDVDSTY--  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --QLEALVGR H SRK------- Site 3008
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --ILR----- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --QYF----- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --FFCKETDM S HSGWRLKTLE Site 2957
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --KMT----- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --RFA----- - GLR----F--  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --FYRGRLDW D ENTSAGRY-- Site 2978
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --AVK----- - ------KM--  
Naegleria.gruberi.LF4 --RYL----- - ---SNGKF--  
Saccharomyces.bayanus.IME2 KLNLK----- - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --HFNDILGQ H SRKR------ Site 3008
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a -RNYV----- - -----TKL--  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --NYI----- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th FFTKDPINST Y QLKKNEKL-- Site 2975
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --KYF----- - -----ERL--  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --NFVSSKGY P RYCTVTTL-- Site 2960
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --RFH----- - GLR----F--  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --ALI----- - -------L--  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --DSKGLPKN I NNNRGGKR-- Site 2979
Aspergillus.nidulans.IME2 L-GFT----- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi NASYDPAASK N TDHKASRVQA Site 3048
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --NHV----- - ----------  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SMNFR----- - -------F--  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --DYK----- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --NYVEN--- - ----------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --EFK----- - ----------  
Penicillium.marneffei.IME2 KLGFT----- - -------F--  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --NYI----- - -------SSL  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --SFV----- - -----SST--  
Drosophila.melanogaster.MAK MIHFR----- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --DFNFIQID H DPITNQETRK Site 2981
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr NFMYIEVDKV T EREKVTVM-- Site 2985
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --YFNTM--- - ----------  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep --EWK----- - RLSSMEAF--  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --QYS----- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --NYVEN--- - ----------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --NYVEN--- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --KYF----- - HHD----RLD  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ASHQPAISEK T DHKASCLVQT Site 3048
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 --MYL----- - NYCRSLRF--  
Candida.parapsilosis.IME2 --HAL----- - GHS----L--  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --EYY----- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --EFK----- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --NYVEN--- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --RFNDILGR H SRKR------ Site 3008
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U FKTHNVLFGL D EHSSAGRY-- Site 2979
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --SFV----- - -----SST--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --TYN----- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --RFNDILGR H SRK------- Site 3008
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --EYE----- - SLKQMKTF--  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --KYIQS--- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --KYF----- - -----ERL--  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --RFNDILGR H SRK------- Site 3008
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --EFK----- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --SFK----- - -------F--  
Candida.orthopsilosis.IME2 -LGHS----- - -------L--  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --DYV----- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --NYVEN--- - ----------  
Debaryomyces.hansenii.IME2 RMGFS----- - -------L--  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --EFK----- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin --EYE----- - ---QLSKF--  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --HFK----- - -----TVF--  
Caenorhabditis.briggsae.CDK1 --DYK----- - -----ATF--  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --RFHDILQR H SRK------- Site 3008
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --DYN----- - ------KI--  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --YFINSKGL P RYCSVSTQ-- Site 2960
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --AFA----- - ----------  
Monosiga.brevicollis.CDK1 --DYK----- - -----QTF--  
Saccharomyces.cerevisiae.SKY1 --TFFNSRGL L RNISKLKF-- Site 2983
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --EYV----- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --VFT----- - GLK----V--  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --EFK----- - -------F--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas --TYL----- - NYCRSLRF--  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --VLH----- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ELFYK----- - -NPVFAGVRL  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --NFK----- - -----RLNNI  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --RFH----- - ----GLRF--  
Ajellomyces.capsulatus.CDK1 --DFK----- - -----ASF--  
Dictystelium.discoideum.MAPK3..Extracellular.signa -RQFI----- - -----RNM--  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --AFH----- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --QYS----- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --TYV----- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --SYI----- - -----QSL--  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO LEHFP----- - -----QRH--  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --RG------ - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --NYVEN--- - ----------  
Saccharomyces.cerevisiae.CDK1 --DFK----- - ----------  
Lodderomyces.elongisporus.IME2 NLGIE----- - -------L--  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --TYI----- - -----SS---  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --FYHGRLDW D DNTSAGRY-- Site 2978
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --RFH----- - GLR----F--  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --EHK----- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D SVLLS----- - -------R--  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase YFHHN----- - QLDWDEHS--  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --FFN----- - -RDGDSPY--  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d MNQYF----- - -----SGVKI  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --EFK----- - ----------  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --DYK----- - -----ATF--  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --RGA----- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --EYR----- - TYQATGPY--  
Salmo.salar.CDK1 --DYK----- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --DYV----- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --DYN----- - ------KI--  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --EFK----- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable GSFKSSCVSL T LHRQMVPASI Site 4552
Aspergillus.fumigatus.IME2 KLGFT----- - -------F--  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan MKDFR----- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --FCSGHLDW N ESSKAGRF-- Site 2978
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --SYI----- - -----KSL--  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --NHV----- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --FFN----- - -RDTDSPY--  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --NYL----- - -----QSL--  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --NYN----- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. VGQYS----- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --QFF----- - -----SGVCV  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --NYV----- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. -AKYI----- - -----KTL--  
Candida.glabrata.IME2 KLNLK----- - -------F--  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. -MNFR----- - -------F--  
Schizosaccharomyces.pombe.IME2 KLGIS----- - -------L--  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --EYI----- - -----RSL--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --DYV----- - ------AL--  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --FFK----- - -RNPHPDATN  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. --MYL----- - NYCRGLRF--  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --AYN----- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --QFF----- - -----RGISI  
Branchiostoma.floridae.CDK1 --DYK----- - -----PTF--  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --FYHGRLDW D ENTSAGRYVR Site 2978
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --EHR----- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD FYGFR----- - -------F--  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --EFK----- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. AMNFR----- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --FYKGGLVW D ENSSDGRY-- Site 2978
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --FFE----- - ------KL--  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep --DYK----- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --AYI----- - -----QSL--  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --NYI----- - ----------  
Lachancea.thermotolerans.SKY1 --TFFNSRGQ L RNISKLKF-- Site 2983
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --VYI----- - ----------  
Dictyostelium.discoideum.CDK1 --EYV----- - -----STF--  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --NYM----- - -----EGL--  
Xenopus.tropicalis.IME2 --DYKST--- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --FFN----- - -RDPDLGY--  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --RFNDILGR H SRKR------ Site 3008
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --DYK----- - -----STF--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --DYK----- - -----GDF--  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --NYN----- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD GTMLE----- - ------SL--  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --KFF----- - -----EKL--  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --EFK----- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --QFK----- - -------L--  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --SLR----- - ----------  
Encephalitozoon.cuniculi.CDK1 --NYKVE--- - ----------  
Saccharomyces.kluyveri.IME2 RLNLK----- - -------F--  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --FHHNQLDW D EHSSAGRY-- Site 2978
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --NYL----- - -------LSL  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --NYN----- - ----------  
Cryptococcus.neoformans.IME2 NVGFS----- - -------F--  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --FFK----- - -RNPHPDAAN  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --FFTKKGDL K HITKLK---- Site 2984
Candida.lusitaniae.IME2 NLGFT----- - -------M--  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --FFN----- - ---RDPNLGY  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A EHHTL----- - TKD----F--  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --DYN----- - ------KI--  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --LFF----- - -----TGVSI  
Gallus.gallus.CDK2 --DYK----- - ----------  
Emericella.nidulans.CDK1 --DFK----- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --NFD----- - -------F--  
Homo.sapiens.CDK1 --DYK----- - -----NTF--  
Candida.albicans.CDK1 --DFK----- - -----SSF--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --RFNDILGR H SRKR------ Site 3008
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --AYI----- - -----QSL--  
Mus.musculus.ICK..Serine.threonine.protein.kinase. -MNFL----- - ----------  
Saccharomyces.castelli.IME2 KLNLE----- - -------F--  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec VHRYQ--LDW D ALSSSGRY-- Site 2978
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --DYV----- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --HFK----- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --EFK----- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS LKEFV-YDLL N KECTIGTF-- Site 2992
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --DYV----- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --LYE----- - ------KL--  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --FFN----- - -RDTDSPY--  
Acyrthosiphon.pisum.CDK1 --DFK----- - -----PLF--  
Candida.tropicalis.CDK1 KLGLK----- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin --EHH----- - --TLTKDF--  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --EFK----- - -------F--  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --RFNDILGR H SRKR------ Site 3008
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --TYN----- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --QLEALVGR H SRK------- Site 3008
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --NYN----- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --SYI----- - -----KSL--  
Candida.albicans.SSN3..Serine.threonine.protein.ki --EYLSFTQH F NQN----Y-- Site 2993
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF HMDFN----- - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --EFK----- - -------F--  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara -KSYV----- - -----RSL--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - GCEGVRSF--  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --RFNDILGR H SRKR------ Site 3008
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --FFC----- - -REPDAPY--  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --KMT----- - ----------  
Candida.dubliniensis.IME2 KLGIK----- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --NYV----- - ----------  
Aspergillus.niger.IME2 KLGFT----- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --NYI----- - -------QSL  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --IFA----- - GVV----L--  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --HFK----- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --RFNDILGR H SRKR------ Site 3008
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --YFDKTEDG I YYCKKTRDGY Site 2972
Schizosaccharomyces.japonicus.IME2 DLGFQ----- - -------L--  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --NYV----- - ----------  
Gallus.gallus.CDK1 --DYK----- - -----NTF--  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --DYK----- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --EHK----- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - -----DTF--  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --EFK----- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --NYM----- - -----KGL--  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -SEYD----- - ------NI--  
Kluyveromyces.waltii.IME2 -LNLK----- - -------F--  
Debaryomyces.hansenii.SKY1 --DFFNSRGE L HRIQKLK--- Site 2983
Saccharomyces.cerevisiae.IME2 -LNLK----- - -------L--  
Schizosaccharomyces.japonicus.b.IME2 KLGFA----- - -------F--  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un RNAFH----- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --HFNDILGQ H SRK------- Site 3008
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --VYI----- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --AFH----- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --DHV----- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --NYIKS--- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --GVV----- - -------L--  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --TYV----- - ----------  
Candida.albicans.IME2 -LGIK----- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d RSAFS----- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k LAKYF----- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --NYI----- - ---------Q  
Kluyveromyces.lactis.IME2 ALNYE----- - -------F--  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --AYI----- - -----QSL--  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --NYVEN--- - ----------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --TYIQS--- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 --MYL----- - NYCRSLRF--  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --TYIQS--- - ----------  
Amphimedon.queenslandica.CDK1 --DYK----- - -----SSF--  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d SNGFF----- - -----HGISI  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --DYK----- - -----GSF--  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME LSQNS----- - ----------  
Neurospora.crassa.IME2 KLGFS----- - -------F--  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --DYV----- - ---ALPSF--  
Dictyostelium.discoideum.DYRK2..Probable.serine.th --FFEDDGTP K PVKNSTTG-- Site 2976
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --AFA----- - ----------  
Hydra.magnipapillata.CDK1 --EFK----- - -----SDF--  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar VSQYT----- - ----------  
Ashbya.gossypii.IME2 RLNLK----- - -------F--  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --YFINSKGI P RYCSVTTQ-- Site 2960
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --EHK----- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ASVIQ----- - ----------  
Schizosaccharomyces.pombe.b.IME2 RLGFM----- - -------L--  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --NYL----- - -------LSL  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --FFCRETDM S HSGWRLKTLE Site 2957
Schizosaccharomyces.pombe.CDK1 --DYK----- - -----STF--  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --FYRGRLDW D ESSSAGKY-- Site 2978
Saccoglossus.kowalevskii.CDK1 --DFK----- - -----SSF--  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas --TYL----- - NFCRSLRF--  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --TYV----- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --DYQ----- - -----SSF--  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable -VYYLLLPFM L HINPSDRLAI Site 3127
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --DYK----- - -----GSF--  
Yarrowia.lipolytica.IME2 KLNIN----- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil --EYD----- - ---QITKF--  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --DYK----- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K LQGFV-RALL D KEVEEGTL-- Site 2998
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --EHK----- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --EHR----- - ----------  
Species Residue at Site 1900
in 'muscle'
msaprobs

The residue for every species at site 1900 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -KYFD----- - KTEDGIYY--  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --ILR----- - ----------  
Scheffersomyces.stipitis.SKY1 --DFFNSRGE L HRIVKLKP-- Site 2983
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --DYK----- - ----------  

Generated by PhyloBot at 04:35, November 12th 2019
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