cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 1898 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1898 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1898 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 1898 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --DLGII--- - ---------L  
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ----YFT--- - --HKGDLRKI  
Danio.rerio.CDK1 ----DYK--- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge ----RYI--- - ----------  
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ----DYK--- - --------PY  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ----DYR--- - --------PF  
Candida.guilliermondii.IME2 --KCGYS--- - ---------F  
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ----SYF--- - --HYCRSLRF  
Chlamydomonas.reinhardtii.LF4 --HMDFN--- - ---------F  
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ----NHS--- - ----------  
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ----MYL--- - --NYCRSLRF  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ----RYL--- - --EIVRNLSF  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho ----EHS--- - ----TLMKDF  
Schizosaccharomyces.octosporus.b.IME2 --KLGFS--- - ---------F  
Candida.albicans.MAPK3..Extracellular.signal.regul ----EYI--- - -------RSL  
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ----IYL--- - --NYCRSLKF  
Suberites.domuncula.JNK..Stress.activated.protein. ----LYC--- - ---------E  
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ----FYKGGL V WDENSSDGRY Site 2976
Aedes.aegypti.CDK1 ----DYK--- - -------PTF  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ----FHHDRL D WDEHSSAGRY Site 2976
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ----FYRGRL D WDENTSAGRY Site 2976
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ----FFDSKG F PKNITNNRGK Site 2959
Homo.sapiens.HIPK1..Homeodomain.interacting.protei ----FFN--- - ---RDPNLGY  
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ----QFF--- - -------SGV  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ----NYQ--- - -------ASF  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ----HFNDIL G QHSRKR---- Site 3005
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ----NYL--- - -------ESL  
Strongylocentrotus.purpuratus.CDK1 ----DYK--- - -------TSF  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ----SYF--- - --HYCHSLTF  
Drosophila.melanogaster.CDK1 ----DYK--- - -------NTF  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ----QYL--- - --NYSRKLKF  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ----TFL--- - --NYTRFLKF  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ----DYFDRH G DLKRIRRLKY Site 2981
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ----TYS--- - ----------  
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. ----QYK--- - ---IKKFVMY  
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ----NYVEN- - ----------  
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 ----VFA--- - --GVR----L  
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ----NYVEN- - ----------  
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ----SYI--- - -------QSL  
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo ----ILR--- - ----------  
Bombus.terrestris.CDK1 ----DYT--- - -------SMF  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ----EFFTKK G DLKHITKLK- Site 2981
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ----LFA--- - --GMR----L  
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ----TYVEN- - ----------  
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d ----YFNTM- - ----------  
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. ---MSFD--- - ---------F  
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - ----------  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ----DVD--- - ----------  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ----MYL--- - --NYCRSLRF  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ----SYF--- - --HYCRSLRF  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO ----FFY--- - ---RDVDSTY  
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ----QLEALV G RHSRK----- Site 3005
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl ----ILR--- - ----------  
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ----QYF--- - ----------  
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ----FFCKET D MSHSGWRLKT Site 2955
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O ----KMT--- - ----------  
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ----RFA--- - --GLR----F  
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ----FYRGRL D WDENTSAGRY Site 2976
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O ----AVK--- - --------KM  
Naegleria.gruberi.LF4 ----RYL--- - -----SNGKF  
Saccharomyces.bayanus.IME2 --KLNLK--- - ----------  
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ----HFNDIL G QHSRKR---- Site 3005
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ---RNYV--- - -------TKL  
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki ----NYI--- - ----------  
Dictyostelium.discoideum.DYRK1..Probable.serine.th --FFTKDPIN S TYQLKKNEKL Site 2973
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ----KYF--- - -------ERL  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ----NFVSSK G YPRYCTVTTL Site 2958
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ----RFH--- - --GLR----F  
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ----ALI--- - ---------L  
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ---------- - ----------  
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ----DSKGLP K NINNNRGGKR Site 2977
Aspergillus.nidulans.IME2 -KL-GFT--- - ----------  
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -GNASYDPAA S KNTDHKASRV Site 3046
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se ----NHV--- - ----------  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --SMNFR--- - ---------F  
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ----DYK--- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ----NYVEN- - ----------  
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ----EFK--- - ----------  
Penicillium.marneffei.IME2 --KLGFT--- - ---------F  
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ----NYI--- - ---------S  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ----SFV--- - -------SST  
Drosophila.melanogaster.MAK --MIHFR--- - ----------  
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ----DFNFIQ I DHDPITNQET Site 2979
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --NFMYIEVD K VTEREKVTVM Site 2983
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ----YFNTM- - ----------  
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ----EWK--- - --RLSSMEAF  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ----QYS--- - ----------  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ----NYVEN- - ----------  
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ----NYVEN- - ----------  
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ----KYF--- - --HHD----R  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis GHASHQPAIS E KTDHKASCLV Site 3046
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ----MYL--- - --NYCRSLRF  
Candida.parapsilosis.IME2 ----HAL--- - --GHS----L  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ----EYY--- - ----------  
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ----EFK--- - ----------  
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ----NYVEN- - ----------  
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ----RFNDIL G RHSRKR---- Site 3005
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --FKTHNVLF G LDEHSSAGRY Site 2977
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ----SFV--- - -------SST  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ----TYN--- - ----------  
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ----RFNDIL G RHSRK----- Site 3005
Yarrowia.lipolytica.SSN3..Serine.threonine.protein ----EYE--- - --SLKQMKTF  
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ----KYIQS- - ----------  
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ----KYF--- - -------ERL  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ----RFNDIL G RHSRK----- Site 3005
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ----EFK--- - ----------  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ----SFK--- - ---------F  
Candida.orthopsilosis.IME2 ---LGHS--- - ---------L  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ----DYV--- - ----------  
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str ----NYVEN- - ----------  
Debaryomyces.hansenii.IME2 --RMGFS--- - ---------L  
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati ----EFK--- - ----------  
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ----EYE--- - -----QLSKF  
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ----HFK--- - -------TVF  
Caenorhabditis.briggsae.CDK1 ----DYK--- - -------ATF  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ----RFHDIL Q RHSRK----- Site 3005
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de ----DYN--- - --------KI  
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ----YFINSK G LPRYCSVSTQ Site 2958
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ----AFA--- - ----------  
Monosiga.brevicollis.CDK1 ----DYK--- - -------QTF  
Saccharomyces.cerevisiae.SKY1 ----TFFNSR G LLRNISKLKF Site 2981
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP ----EYV--- - ----------  
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ----VFT--- - --GLK----V  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg ----EFK--- - ---------F  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ----TYL--- - --NYCRSLRF  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ----VLH--- - ----------  
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --ELFYK--- - ---NPVFAGV  
Dictyostelium.discoideum.CDK10..Probable.cyclin.de ----NFK--- - -------RLN  
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ----RFH--- - ------GLRF  
Ajellomyces.capsulatus.CDK1 ----DFK--- - -------ASF  
Dictystelium.discoideum.MAPK3..Extracellular.signa ---RQFI--- - -------RNM  
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ----AFH--- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ----QYS--- - ----------  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac ----TYV--- - ----------  
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ----SYI--- - -------QSL  
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --LEHFP--- - -------QRH  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri ----RG---- - ----------  
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ----NYVEN- - ----------  
Saccharomyces.cerevisiae.CDK1 ----DFK--- - ----------  
Lodderomyces.elongisporus.IME2 --NLGIE--- - ---------L  
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ----TYI--- - -------SS-  
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ----FYHGRL D WDDNTSAGRY Site 2976
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar ----RFH--- - --GLR----F  
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. ----EHK--- - ----------  
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --SVLLS--- - ---------R  
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --YFHHN--- - --QLDWDEHS  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U ----FFN--- - ---RDGDSPY  
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --MNQYF--- - -------SGV  
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ----EFK--- - ----------  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ----DYK--- - -------ATF  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ----RGA--- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro ----EYR--- - --TYQATGPY  
Salmo.salar.CDK1 ----DYK--- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d ----DYV--- - ----------  
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d ----DYN--- - --------KI  
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi ---------- - ----------  
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ----EFK--- - ----------  
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LRGSFKSSCV S LTLHRQMVPA Site 4550
Aspergillus.fumigatus.IME2 --KLGFT--- - ---------F  
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan TLMKDFR--- - ----------  
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ----FCSGHL D WNESSKAGRF Site 2976
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha ----SYI--- - -------KSL  
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S ----NHV--- - ----------  
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ----FFN--- - ---RDTDSPY  
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ----NYL--- - -------QSL  
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ----NYN--- - ----------  
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -LVGQYS--- - ----------  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ----QFF--- - -------SGV  
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S ----NYV--- - ----------  
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. ---AKYI--- - -------KTL  
Candida.glabrata.IME2 --KLNLK--- - ---------F  
Homo.sapiens.MAK..Serine.threonine.protein.kinase. ---MNFR--- - ---------F  
Schizosaccharomyces.pombe.IME2 --KLGIS--- - ---------L  
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P ----EYI--- - -------RSL  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ----DYV--- - --------AL  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom ----FFK--- - ---RNPHPDA  
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ----MYL--- - --NYCRGLRF  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ----AYN--- - ----------  
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d ----QFF--- - -------RGI  
Branchiostoma.floridae.CDK1 ----DYK--- - -------PTF  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ----FYHGRL D WDENTSAGRY Site 2976
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ----EHR--- - ----------  
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --FYGFR--- - ---------F  
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ----EFK--- - ----------  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --AMNFR--- - ----------  
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ----FYKGGL V WDENSSDGRY Site 2976
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ----FFE--- - --------KL  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ----DYK--- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ----AYI--- - -------QSL  
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ----NYI--- - ----------  
Lachancea.thermotolerans.SKY1 ----TFFNSR G QLRNISKLKF Site 2981
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ----VYI--- - ----------  
Dictyostelium.discoideum.CDK1 ----EYV--- - -------STF  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. ----NYM--- - -------EGL  
Xenopus.tropicalis.IME2 ----DYKST- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ----FFN--- - ---RDPDLGY  
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ----RFNDIL G RHSRKR---- Site 3005
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ----DYK--- - -------STF  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ----DYK--- - -------GDF  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ----NYN--- - ----------  
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --GTMLE--- - --------SL  
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ----KFF--- - -------EKL  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ----EFK--- - ----------  
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ----QFK--- - ---------L  
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ----SLR--- - ----------  
Encephalitozoon.cuniculi.CDK1 ----NYKVE- - ----------  
Saccharomyces.kluyveri.IME2 --RLNLK--- - ---------F  
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ----FHHNQL D WDEHSSAGRY Site 2976
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ----NYL--- - ---------L  
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ----NYN--- - ----------  
Cryptococcus.neoformans.IME2 --NVGFS--- - ---------F  
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ----FFK--- - ---RNPHPDA  
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ----FFTKKG D LKHITKLK-- Site 2982
Candida.lusitaniae.IME2 --NLGFT--- - ---------M  
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom ----FFN--- - -----RDPNL  
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A --EHHTL--- - --TKD----F  
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ----DYN--- - --------KI  
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ----LFF--- - -------TGV  
Gallus.gallus.CDK2 ----DYK--- - ----------  
Emericella.nidulans.CDK1 ----DFK--- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ----NFD--- - ---------F  
Homo.sapiens.CDK1 ----DYK--- - -------NTF  
Candida.albicans.CDK1 ----DFK--- - -------SSF  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ----RFNDIL G RHSRKR---- Site 3005
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ----AYI--- - -------QSL  
Mus.musculus.ICK..Serine.threonine.protein.kinase. ---MNFL--- - ----------  
Saccharomyces.castelli.IME2 --KLNLE--- - ---------F  
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --VHRYQ--L D WDALSSSGRY Site 2976
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ----DYV--- - ----------  
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ----HFK--- - ----------  
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ----EFK--- - ----------  
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS NGLKEFV-YD L LNKECTIGTF Site 2990
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ----DYV--- - ----------  
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho ----LYE--- - --------KL  
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ----FFN--- - ---RDTDSPY  
Acyrthosiphon.pisum.CDK1 ----DFK--- - -------PLF  
Candida.tropicalis.CDK1 --KLGLK--- - ----------  
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin ----EHH--- - ----TLTKDF  
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ----EFK--- - ---------F  
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ----RFNDIL G RHSRKR---- Site 3005
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ----TYN--- - ----------  
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ----QLEALV G RHSRK----- Site 3005
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ----NYN--- - ----------  
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ----SYI--- - -------KSL  
Candida.albicans.SSN3..Serine.threonine.protein.ki ----EYLSFT Q HFNQN----Y Site 2991
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --HMDFN--- - ----------  
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ----EFK--- - ---------F  
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ---KSYV--- - -------RSL  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ---------- - --GCEGVRSF  
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ----RFNDIL G RHSRKR---- Site 3005
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ----FFC--- - ---REPDAPY  
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d ----KMT--- - ----------  
Candida.dubliniensis.IME2 --KLGIK--- - ----------  
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ----NYV--- - ----------  
Aspergillus.niger.IME2 --KLGFT--- - ----------  
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ----NYI--- - ---------Q  
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ----IFA--- - --GVV----L  
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ----HFK--- - ----------  
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ----RFNDIL G RHSRKR---- Site 3005
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ----YFDKTE D GIYYCKKTRD Site 2970
Schizosaccharomyces.japonicus.IME2 --DLGFQ--- - ---------L  
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ----NYV--- - ----------  
Gallus.gallus.CDK1 ----DYK--- - -------NTF  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ----DYK--- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ----EHK--- - ----------  
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - -------DTF  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ----EFK--- - ----------  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. ----NYM--- - -------KGL  
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---SEYD--- - --------NI  
Kluyveromyces.waltii.IME2 ---LNLK--- - ---------F  
Debaryomyces.hansenii.SKY1 ----DFFNSR G ELHRIQKLK- Site 2981
Saccharomyces.cerevisiae.IME2 ---LNLK--- - ---------L  
Schizosaccharomyces.japonicus.b.IME2 --KLGFA--- - ---------F  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --RNAFH--- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ----HFNDIL G QHSRK----- Site 3005
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ----VYI--- - ----------  
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ----AFH--- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ----DHV--- - ----------  
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ----NYIKS- - ----------  
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de ----GVV--- - ---------L  
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act ----TYV--- - ----------  
Candida.albicans.IME2 ---LGIK--- - ----------  
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --RSAFS--- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --LAKYF--- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ----NYI--- - ----------  
Kluyveromyces.lactis.IME2 --ALNYE--- - ---------F  
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ----AYI--- - -------QSL  
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ----NYVEN- - ----------  
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ----TYIQS- - ----------  
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ----MYL--- - --NYCRSLRF  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ----TYIQS- - ----------  
Amphimedon.queenslandica.CDK1 ----DYK--- - -------SSF  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --SNGFF--- - -------HGI  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ----DYK--- - -------GSF  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME NMLSQNS--- - ----------  
Neurospora.crassa.IME2 --KLGFS--- - ---------F  
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ----DYV--- - -----ALPSF  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ----FFEDDG T PKPVKNSTTG Site 2974
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ----AFA--- - ----------  
Hydra.magnipapillata.CDK1 ----EFK--- - -------SDF  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -LVSQYT--- - ----------  
Ashbya.gossypii.IME2 --RLNLK--- - ---------F  
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi ---------- - ----------  
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ----YFINSK G IPRYCSVTTQ Site 2958
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ----EHK--- - ----------  
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --ASVIQ--- - ----------  
Schizosaccharomyces.pombe.b.IME2 --RLGFM--- - ---------L  
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ----NYL--- - ---------L  
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ----FFCRET D MSHSGWRLKT Site 2955
Schizosaccharomyces.pombe.CDK1 ----DYK--- - -------STF  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ----FYRGRL D WDESSSAGKY Site 2976
Saccoglossus.kowalevskii.CDK1 ----DFK--- - -------SSF  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ----TYL--- - --NFCRSLRF  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac ----TYV--- - ----------  
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ----DYQ--- - -------SSF  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ---VYYLLLP F MLHINPSDRL Site 3118
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ----DYK--- - -------GSF  
Yarrowia.lipolytica.IME2 --KLNIN--- - ----------  
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ----EYD--- - -----QITKF  
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ----DYK--- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K GGLQGFV-RA L LDKEVEEGTL Site 2996
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly ----EHK--- - ----------  
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ----EHR--- - ----------  
Species Residue at Site 1898
in 'muscle'
msaprobs

The residue for every species at site 1898 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---KYFD--- - --KTEDGIYY  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo ----ILR--- - ----------  
Scheffersomyces.stipitis.SKY1 ----DFFNSR G ELHRIVKLKP Site 2981
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ----DYK--- - ----------  

Generated by PhyloBot at 04:29, November 12th 2019
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