cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 1757 in Alignment 'muscle'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 1757 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 1757 in 'muscle'
to Sites in 'msaprobs'

What percentage of the residues at this site in muscle are inferred to be a single site (i.e. homologous) in the alignments produced by msaprobs? A value of 100% indicates that the existence of site 1757 is reproduced using the msaprobs method. Values less than 100% indicate that msaprobs made different homology inferences for the residues at this site.


Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 --------TL Q -PIFPGMD-- Site 2625
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD --------TG D -HLFKPKS-- Site 2625
Danio.rerio.CDK1 --------TR R -ALFPGDS-- Site 2625
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge --------DR K -PLFPGRD-- Site 2625
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d --------AG R -PLFPGND-- Site 2625
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK --------SG T -PLFPGQD-- Site 2625
Candida.guilliermondii.IME2 --------AK V TPLFPGAN-- Site 2623
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ --------RG S -LPWQGLK-- Site 2625
Chlamydomonas.reinhardtii.LF4 --------SL F -PLFPGTN-- Site 2625
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g --------IG R -PLFPGDS-- Site 2625
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 --------RG V -LPWQGMK-- Site 2625
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 --------RG Q -LPWQGLK-- Site 2625
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho --------TS E -PIFHCRQ-- Site 2625
Schizosaccharomyces.octosporus.b.IME2 --------TL K -PLFPGRN-- Site 2625
Candida.albicans.MAPK3..Extracellular.signal.regul --------SG R -PLFPGRD-- Site 2625
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. --------RK E -PFFYGHD-- Site 2625
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 --------RG S -LPWQGLK-- Site 2625
Suberites.domuncula.JNK..Stress.activated.protein. --------RG D -ILLPGKD-- Site 2625
Homo.sapiens.CLK3..Dual.specificity.protein.kinase --------RG F -TLFQTHE-- Site 2625
Aedes.aegypti.CDK1 --------TR K -PLFQGDS-- Site 2625
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci --------LG F -TVFPTHD-- Site 2625
Homo.sapiens.CLK2..Dual.specificity.protein.kinase --------VG F -TLFQTHD-- Site 2625
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos --------TG Y -PLFPGEN-- Site 2625
Homo.sapiens.HIPK1..Homeodomain.interacting.protei --------LG W -PLYPGAS-- Site 2625
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar --------SG V -PLWPGKS-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 --------LL R -PLFSGDS-- Site 2625
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. --------RR E -PFFHGQD-- Site 2625
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM --------SN R -PIFPGKH-- Site 2625
Strongylocentrotus.purpuratus.CDK1 --------TR R -ALFPGDS-- Site 2625
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca --------RG S -LPWQGLK-- Site 2625
Drosophila.melanogaster.CDK1 --------TR K -PLFQGDS-- Site 2625
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 --------RG N -LPWQGLP-- Site 2625
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. --------RG S -LPWQGLK-- Site 2625
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH --------TG D -MLFAPKD-- Site 2625
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d --------TG R -PLFPGST-- Site 2625
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. --------SG S -ATFPGMK-- Site 2625
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET --------RG T -VLFPGID-- Site 2625
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 --------MG E -PLFPGDS-- Site 2625
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U --------RH K -ILFPGRD-- Site 2625
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. --------TG K -TLFKGKD-- Site 2625
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo --------LG R RILFQAQS-- Site 2623
Bombus.terrestris.CDK1 --------TR R -ALFPGDS-- Site 2625
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 --------TG D -YLFEPHS-- Site 2625
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar --------TG E -PLFPGDS-- Site 2625
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. --------KG G -VLFPGTD-- Site 2625
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d --------TK K -PIFQANL-- Site 2625
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. --------SL Q -PLFPGVN-- Site 2625
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. --------LG E -PIFCGEN-- Site 2625
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G --------LG E -PIFRGDN-- Site 2625
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 --------RG V -LPWQGMK-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 --------KG S -LPWQGLK-- Site 2625
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO --------LG W -PLYPGSS-- Site 2625
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C --------RK E -PFFYGHD-- Site 2625
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl --------LG R RILFQAQS-- Site 2623
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 --------SG V -PLWPGKS-- Site 2625
Homo.sapiens.HIPK3..Homeodomain.interacting.protei --------LG W -PLYPGAL-- Site 2625
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O --------TQ K -PLFPGNS-- Site 2625
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d --------DG Q -PLFPGES-- Site 2625
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci --------VG F -TLFQTHD-- Site 2625
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O --------TQ K -PLFPGKS-- Site 2625
Naegleria.gruberi.LF4 --------TF E -PLFPGEN-- Site 2625
Saccharomyces.bayanus.IME2 --------VF R -ALFPGAN-- Site 2625
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. --------RK E -PFFHGQD-- Site 2625
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a --------LG K -PLFKGHD-- Site 2625
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki --------LR T -PYLPGTG-- Site 2625
Dictyostelium.discoideum.DYRK1..Probable.serine.th --------VG E -PLFSGQN-- Site 2625
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos --------TG E -PLFSGSN-- Site 2625
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos --------TG Y -PLLPGED-- Site 2625
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d --------DG Q -PLFPGES-- Site 2625
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a --------RG Q -PLFPGTS-- Site 2625
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific --------YG K -TPFQNIT-- Site 2625
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos --------TG Y -PLFPGEN-- Site 2625
Aspergillus.nidulans.IME2 --------TL K -PLFPGGN-- Site 2625
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi --------SG R YPFYKASD-- Site 2624
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se --------QR K -ILFQAAG-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. --------TF R -PLFPGTS-- Site 2625
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep --------TR R -ALFPGDS-- Site 2625
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. --------RH K -ILFPGRD-- Site 2625
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. --------LG Q -PLFPGES-- Site 2625
Penicillium.marneffei.IME2 --------TL K -PLFPGVN-- Site 2625
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --------TG R -TLFPGTD-- Site 2625
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a --------TG R -MLFAGAH-- Site 2625
Drosophila.melanogaster.MAK --------TF R -PLFPGSS-- Site 2625
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH --------TG Q -ILFPGRT-- Site 2625
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr --------TG K -ILFPGKT-- Site 2625
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de --------TK K -PIFQANL-- Site 2625
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep --------TT K -PLFPGKE-- Site 2625
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --------AH K -PLLPGTS-- Site 2625
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin --------RH K -ILFPGRD-- Site 2625
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a --------KG C -VIFQGTD-- Site 2625
Homo.sapiens.CLK1..Dual.specificity.protein.kinase --------LG F -TVFPTHD-- Site 2625
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis --------SG R YPFYKASD-- Site 2624
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 --------RG V -LPWQGMK-- Site 2625
Candida.parapsilosis.IME2 --------NF A -PLFPGAN-- Site 2625
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p --------AL S -PLFKGDE-- Site 2625
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen --------LG Q -PIFPGDS-- Site 2625
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. --------KG C -VIFQGTD-- Site 2625
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki --------RK E -PFFHGHD-- Site 2625
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U --------LG F -TVFQTHD-- Site 2625
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a --------TG K -MLFAGAH-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d --------TG R -PLFPGST-- Site 2625
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. --------RK E -PFFHGHD-- Site 2625
Yarrowia.lipolytica.SSN3..Serine.threonine.protein --------AL R -PIFKGEE-- Site 2625
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. --------TG K -TLFKGKD-- Site 2625
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos --------TG E -PLFSGSN-- Site 2625
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE --------RK E -PFFHGHD-- Site 2625
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --------LG Q -PLFPGDS-- Site 2625
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD --------LG Q -PLFPGEN-- Site 2625
Candida.orthopsilosis.IME2 --------VN F APLFPGAN-- Site 2623
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --------LR V -PFLAGDS-- Site 2625
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str --------RG R -VLFPGAD-- Site 2625
Debaryomyces.hansenii.IME2 --------AN F IPLFPGAS-- Site 2623
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --------LG Q -PLFPGES-- Site 2625
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin --------IG L RPIFKGEE-- Site 2623
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --------ST K -PLFPGEC-- Site 2625
Caenorhabditis.briggsae.CDK1 --------TK K -PLFQGDS-- Site 2625
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO --------RK E -PFFHGHD-- Site 2625
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de --------NG S -PLFPGEN-- Site 2625
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos --------TG Q -PLFPGED-- Site 2625
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --------RR K -PLFRGNS-- Site 2625
Monosiga.brevicollis.CDK1 --------TK R -PLFHGDS-- Site 2625
Saccharomyces.cerevisiae.SKY1 --------TG D -FLFEPDE-- Site 2625
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP --------SG T -PLFPGKD-- Site 2625
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --------TG E -PVFPGDS-- Site 2625
Drosophila.melanogaster.GSK3..Protein.kinase.shagg --------LG Q -PIFPGDS-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas --------RG S -LPWQGLK-- Site 2625
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. --------RG R -PLFPGTS-- Site 2625
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d --------MG Q -PLFPGES-- Site 2625
Dictyostelium.discoideum.CDK10..Probable.cyclin.de --------IG R -PLITGNN-- Site 2625
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d --------DG Q -PLFPGES-- Site 2625
Ajellomyces.capsulatus.CDK1 --------TR K -PLFPGDS-- Site 2625
Dictystelium.discoideum.MAPK3..Extracellular.signa --------LG R KPLFQGKD-- Site 2623
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --------RR K -PLFRGSS-- Site 2625
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --------AH K -PLLPGTS-- Site 2625
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac --------CH K -ILFPGRD-- Site 2625
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. --------TG K -TLFKGKD-- Site 2625
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO --------NR R -ALFPGTS-- Site 2625
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri --------LG R RILFQAQS-- Site 2623
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha --------KG A -VLFPGTD-- Site 2625
Saccharomyces.cerevisiae.CDK1 --------NR K -PIFSGDS-- Site 2625
Lodderomyces.elongisporus.IME2 --------NF A -PLFPGSN-- Site 2625
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen --------TG R -TLFPGTD-- Site 2625
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un --------VG F -TLFQTHD-- Site 2625
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar --------DG Q -PLFPGES-- Site 2625
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. --------LG Q -PIFPGES-- Site 2625
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D --------RQ K -PLFQGTS-- Site 2625
Homo.sapiens.CLK4..Dual.specificity.protein.kinase --------LG F -TVFQTHD-- Site 2625
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U --------LG W -PLYPGAS-- Site 2625
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d --------SG V -PLWPGKS-- Site 2625
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen --------LG Q -PIFPGDS-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 --------TK K -PLFQGDS-- Site 2625
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep --------RR K -PLFCGNS-- Site 2625
Cryptococcus.neoformans.SSN3..Serine.threonine.pro --------SL R -PIFKGDE-- Site 2625
Salmo.salar.CDK1 --------TR R -ALFPGDS-- Site 2625
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d --------LR V -PFLPGDS-- Site 2625
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d --------NG S -PLFPGKN-- Site 2625
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi --------YG K -TPFQQII-- Site 2625
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen --------LG Q -PIFPGDS-- Site 2625
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable --------TS C -SFMDGTE-- Site 2623
Aspergillus.fumigatus.IME2 --------TL K -PLFPGGN-- Site 2625
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan --------TS E -PIFHCRQ-- Site 2625
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha --------EG F -TLFQTHD-- Site 2625
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha --------TG K -TLFKGKD-- Site 2625
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S --------QR K -ILFQAAG-- Site 2625
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma --------LG W -PLYPGAS-- Site 2625
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina --------SN R -PIFPGKH-- Site 2625
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d --------SG R -PLFPGST-- Site 2625
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --------AH R -PLLPGTS-- Site 2625
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de --------SG A -PLWPGKS-- Site 2625
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S --------RG G -VLFPGTD-- Site 2625
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. --------TG K -PLFPGND-- Site 2625
Candida.glabrata.IME2 --------VF K -PLFPGSN-- Site 2625
Homo.sapiens.MAK..Serine.threonine.protein.kinase. --------ML R -PLFPGTS-- Site 2625
Schizosaccharomyces.pombe.IME2 --------TL Q -PIFPGND-- Site 2625
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P --------SG R -PLFPGRD-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl --------AG R -PLFPGSD-- Site 2625
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom --------LG W -PLYPGNN-- Site 2625
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. --------NR T SLPWQGLK-- Site 2623
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d --------TG K -PLFPGST-- Site 2625
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d --------TG Q -PLWPGKS-- Site 2625
Branchiostoma.floridae.CDK1 --------TR R -ALFPGDS-- Site 2625
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara --------VG F -TLFQTHD-- Site 2625
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH --------LG H -PLFPGES-- Site 2625
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD --------SG D -ALFPGES-- Site 2625
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --------LG Q -PIFPGDS-- Site 2625
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. --------TL R -PLFPGAS-- Site 2625
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci --------RG F -TLFQTHE-- Site 2625
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos --------TG E -PLFSGAN-- Site 2625
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep AVSAPHPVTR R -ALFPGDS-- Site 2625
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act --------AR R -QLFPGKN-- Site 2625
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. --------TG R -TLFPGTD-- Site 2625
Lachancea.thermotolerans.SKY1 --------TG D -FLFEPDE-- Site 2625
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a --------TG K -TLFAGAH-- Site 2625
Dictyostelium.discoideum.CDK1 --------NK K -PLFSGDC-- Site 2625
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. --------TG K -ILFKGND-- Site 2625
Xenopus.tropicalis.IME2 --------TR R -ALFPGDS-- Site 2625
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U --------LG W -PLYPGAS-- Site 2625
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. --------RK E -PFFHGHD-- Site 2625
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d --------TR R -ALFPGDS-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara --------TR K -ALFQGDS-- Site 2625
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. --------QG Q -PLFPGVS-- Site 2625
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD --------LG E KAMFPGNS-- Site 2623
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos --------TG E -PLFSGAN-- Site 2625
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen --------LG Q -PIFPGDS-- Site 2625
Drosophila.melanogaster.GSK3H..Putative.glycogen.s --------LG Q -LIFPGDS-- Site 2625
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD --------LH D -PLFPART-- Site 2625
Encephalitozoon.cuniculi.CDK1 --------LM R -PFFPGDS-- Site 2625
Saccharomyces.kluyveri.IME2 --------TF R -PLFPGSD-- Site 2625
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci --------LG F -TVFQTHD-- Site 2625
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a --------SN R -PIFPGKH-- Site 2625
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. --------QG Q -PLFPGVS-- Site 2625
Cryptococcus.neoformans.IME2 --------NL K -PLFPGVS-- Site 2625
Homo.sapiens.HIPK4..Homeodomain.interacting.protei --------LG W -PLYPGNN-- Site 2625
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote --------TG D -YLFEPHS-- Site 2625
Candida.lusitaniae.IME2 --------NF R -PIFCGRN-- Site 2625
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom --------LG W -PLYPGAS-- Site 2625
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A --------TS E -PIFHCRQ-- Site 2625
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep --------NN S -PLFPGEN-- Site 2625
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. --------SG N -PLWPGRS-- Site 2625
Gallus.gallus.CDK2 --------TR R -ALFPGDS-- Site 2625
Emericella.nidulans.CDK1 --------TR K -PLFPGDS-- Site 2625
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. --------SL Q -PLFPGVN-- Site 2625
Homo.sapiens.CDK1 --------TK K -PLFHGDS-- Site 2625
Candida.albicans.CDK1 --------NR K -PLFPGDS-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca --------RK E -PFFHGHD-- Site 2625
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a --------AR R -QLFPGKN-- Site 2625
Mus.musculus.ICK..Serine.threonine.protein.kinase. --------TL R -PLFPGAS-- Site 2625
Saccharomyces.castelli.IME2 --------IF K -PLFPGSN-- Site 2625
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec --------LG S -TLFQTHD-- Site 2625
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep --------LR V -PFLPGDS-- Site 2625
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. --------QG V -AAFPGMK-- Site 2625
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --------LG Q -PLFPGES-- Site 2625
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --------GR R FPMFQSLD-- Site 2624
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --------LR V -PFLAGDS-- Site 2625
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho --------TR S -PIMQGNT-- Site 2625
Homo.sapiens.HIPK2..Homeodomain.interacting.protei --------LG W -PLYPGAS-- Site 2625
Acyrthosiphon.pisum.CDK1 --------TL R -PLFPGDS-- Site 2625
Candida.tropicalis.CDK1 --------AN F VPLFPGSN-- Site 2623
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin --------TS E -PIFHCRQ-- Site 2625
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G --------LG Q -PIFPGDS-- Site 2625
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR --------RK E -PFFHGHD-- Site 2625
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de --------TG R -PLFPGST-- Site 2625
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 --------RK E -PFFYGHD-- Site 2625
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d --------SG R -PLFPGST-- Site 2625
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA --------TG K -TLFKGKD-- Site 2625
Candida.albicans.SSN3..Serine.threonine.protein.ki --------SL R -PIFKGEEAK Site 2625
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF --------SL F -PLFPGTN-- Site 2625
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA --------LG Q -PIFPGDS-- Site 2625
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara --------NG K -TLFKGKD-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de --------KG R -PILQGSS-- Site 2625
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei --------RK E -PFFHGHD-- Site 2625
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U --------LG W -PLYPGAQ-- Site 2625
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d --------TQ K -PLFPGKS-- Site 2625
Candida.dubliniensis.IME2 --------AN F VPLFPGSN-- Site 2623
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a --------LH K -VLFPGRD-- Site 2625
Aspergillus.niger.IME2 --------TL K -PLFPGGN-- Site 2625
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge --------TG R -TLFPGTD-- Site 2625
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d --------TG N -PYLPSSS-- Site 2625
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. --------QG V -AAFPGMK-- Site 2625
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein --------RK E -PFFHGRD-- Site 2625
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty --------TG E -PLFAGSS-- Site 2625
Schizosaccharomyces.japonicus.IME2 --------TL R -PIFPGRD-- Site 2625
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --------RG R -VLFPGGD-- Site 2625
Gallus.gallus.CDK1 --------TK K -PLFHGDS-- Site 2625
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep --------AG R -PLFPGND-- Site 2625
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P --------LG Q -PLFPGES-- Site 2625
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE --------NR V -PLFPGPD-- Site 2625
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. --------LG Q -PIFPGDS-- Site 2625
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. --------TG K -TLFKGSD-- Site 2625
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ --------KK E -PFFKGSS-- Site 2625
Kluyveromyces.waltii.IME2 --------TF R -PLFPGSD-- Site 2625
Debaryomyces.hansenii.SKY1 --------TG D -YLFDPRD-- Site 2625
Saccharomyces.cerevisiae.IME2 --------VF R -ALFPGAN-- Site 2625
Schizosaccharomyces.japonicus.b.IME2 --------ML R -PLFPGRN-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --------RR K -PLFRGNS-- Site 2625
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein --------RK E -PFFHGQD-- Site 2625
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a --------TG K -TLFAGAH-- Site 2625
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --------RR K -PLFRGSS-- Site 2625
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST --------LG K -PLFSGES-- Site 2625
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk --------TG R -PLFKGND-- Site 2625
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de --------TG H -PFLPSSS-- Site 2625
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act --------RG S -VLFPGTD-- Site 2625
Candida.albicans.IME2 --------AN F VPLFPGSN-- Site 2623
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --------KR K -PLFCGNS-- Site 2625
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k --------SK E -VLLQGSS-- Site 2625
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. --------TG R -TLFPGTD-- Site 2625
Kluyveromyces.lactis.IME2 --------TF S -PLFPGSD-- Site 2625
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina --------AR R -QLFPGKN-- Site 2625
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. --------RH K -ILFPGRS-- Site 2625
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. --------QG K -ALFPGSD-- Site 2625
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 --------RG V -LPWQGMK-- Site 2625
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. --------QG K -ALFPGND-- Site 2625
Amphimedon.queenslandica.CDK1 --------TK R -PLFPGDS-- Site 2625
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --------TG Q -PLWPGKS-- Site 2625
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U --------TR K -ALFPGDS-- Site 2625
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME --------QM L -PLFPGKS-- Site 2625
Neurospora.crassa.IME2 --------TL K -PLFPGGN-- Site 2625
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME --------AG R -PLFPGSD-- Site 2625
Dictyostelium.discoideum.DYRK2..Probable.serine.th --------TG V -PLFPGSD-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep --------RR K -PLFCGNS-- Site 2625
Hydra.magnipapillata.CDK1 --------TR K -ALFPGDS-- Site 2625
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --------AH K -PLLPGTS-- Site 2625
Ashbya.gossypii.IME2 --------TF K -PLFPGAD-- Site 2625
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi --------YG R -TPFQHII-- Site 2625
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos --------TG Q -PLFPGED-- Site 2625
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p --------LG Q -PMFPGES-- Site 2625
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace --------LG K -PLFPGTS-- Site 2625
Schizosaccharomyces.pombe.b.IME2 --------SL K -PLFPGRN-- Site 2625
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a --------SN R -PIFPGKH-- Site 2625
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom --------LG W -PLYPGAL-- Site 2625
Schizosaccharomyces.pombe.CDK1 --------RR S -PLFPGDS-- Site 2625
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch --------LG F -TLFQTHD-- Site 2625
Saccoglossus.kowalevskii.CDK1 --------TR R -ALFPGDS-- Site 2625
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas --------LG S -LPWQGLK-- Site 2625
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac --------CH K -ILFPGRD-- Site 2625
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep --------TG K -ALFPGDS-- Site 2625
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable --------AT C -SFLNDTE-- Site 2623
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep --------TR K -ALFPGDS-- Site 2625
Yarrowia.lipolytica.IME2 --------NL K -PLFPGTN-- Site 2625
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil --------IG L QPIFKGEE-- Site 2623
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli --------TR K -ALFPGDS-- Site 2625
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --------SR R FPIFQSMD-- Site 2624
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly --------LG Q -PLFPGES-- Site 2625
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk --------LG H -PLFPGES-- Site 2625
Species Residue at Site 1757
in 'muscle'
msaprobs

The residue for every species at site 1757 of the muscle alignment can be found in the msaprobs alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro --------TG E -PLFAGSS-- Site 2625
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo --------LG R RILFQAQS-- Site 2623
Scheffersomyces.stipitis.SKY1 --------TG D -YLFDPRD-- Site 2625
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep --------AG R -PLFPGND-- Site 2625

Generated by PhyloBot at 02:51, November 16th 2019
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