cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4917 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4917 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4917 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4917 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 PGLTLKSDSH V TSETIS Site 2830
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ------ - --PFLN  
Danio.rerio.CDK1 ------ - VPPLRL  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge YREALA F NPEYQQ Site 2522
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ------ - -----P  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------ - NSRTLL  
Candida.guilliermondii.IME2 FSGSCV S LAQLMG Site 2523
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ LELLSL G GGGKRK Site 2726
Chlamydomonas.reinhardtii.LF4 SLRQLA G QNAGQG Site 2819
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g FEPIVV K QADADS Site 2523
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 DKEKQN G KPLIAD Site 2524
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 KSSKGF F SKLGCC Site 2731
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho QQPPQY S HQTHRY Site 2692
Schizosaccharomyces.octosporus.b.IME2 RINRST S EGFSKG Site 2800
Candida.albicans.MAPK3..Extracellular.signal.regul LKKLLY E EIMKPL Site 2522
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -----E S SRMRTQ Site 2523
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 KDISLF S NSRNRR Site 2523
Suberites.domuncula.JNK..Stress.activated.protein. KTRIYE E VKTYNS Site 2524
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ------ - ---PSR  
Aedes.aegypti.CDK1 ------ - ------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ------ - ----HT  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------ - ---ISR  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------ N VLPPIV Site 2703
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PLSPTK I SQYSYL Site 2930
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar CKTRKS N YHFPNI Site 2523
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------ - ---FNN  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -----S S GLTAAR Site 2523
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM TLKFKE R QPDNAP Site 2520
Strongylocentrotus.purpuratus.CDK1 ------ - PPRLPT  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca TRGSYS P GPSNRT Site 2523
Drosophila.melanogaster.CDK1 ------ - --LVRN  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 QSQNMM N SYYQNR Site 2736
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. PQSSST T TKPPAK Site 2703
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH NVDDQM N NLHIKG Site 2523
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d QPGRGK N RRQSIF Site 2524
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. TTVLIG T QHYSHI Site 2525
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SLETSA G PLGCCR Site 2523
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 DSGADL P QMEHQH Site 2761
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SLETSA G PLGCCR Site 2523
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. ARKDSR R RSGMKL Site 2527
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QPSEMP P SPLVWE Site 2522
Bombus.terrestris.CDK1 ------ - PLPKKT  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ------ - -----S  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar KTTNNG T RGGPRR Site 2775
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SLETSA G TLGCCR Site 2523
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d VPPRGG R GRGVPY Site 2829
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. YHLPTI N RKGGEY Site 2697
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. AMTEAQ R EYLLKK Site 2522
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G VMSEAQ K AKLVRK Site 2522
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 DKEKQN G KPLIAD Site 2524
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 IDNLQV S DEHHPH Site 2711
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AHFAPT N IWYGAE Site 2929
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -----E T SRMRSQ Site 2523
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl QPSEMP P SPLVWE Site 2522
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 CDTKKL N YRFPNI Site 2523
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PLSPTK L SQYPYM Site 2930
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O GASAAG P GFSLKF Site 2525
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d RMPNLN D LKETAL Site 2921
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ------ - ---ISR  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O GASAAG P GFSLKF Site 2525
Naegleria.gruberi.LF4 EKQQKK Y SLHYMI Site 2748
Saccharomyces.bayanus.IME2 LSNQNQ H FGNVTF Site 2745
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -----S S GLTAAR Site 2523
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a PAPAVA E SKETAL Site 2523
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki VDNVEQ T QQAQQV Site 2523
Dictyostelium.discoideum.DYRK1..Probable.serine.th ------ P HNNNNI Site 2731
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ------ Q STAASS Site 2728
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------ V LPKLVS Site 2523
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d EVIFLA S HEKWKQ Site 2900
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ALGRLP L LPGPRA Site 2757
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SECVKS S SQTLWK Site 2523
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------ N ILPPIV Site 2523
Aspergillus.nidulans.IME2 PASTKF L TGSTYR Site 2797
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ------ - ----CS  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se AQASEL P PSPQAW Site 2522
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. GRTDWV A KYGGHR Site 2790
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------ - VPHLRL  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SLEASA G PLGCCR Site 2523
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. PEHARK Q CPFLGL Site 2524
Penicillium.marneffei.IME2 SVANSI L SGSTYR Site 2800
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen EEWKSK I YIQNRN Site 2523
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DLVQTE A FSKERW Site 2793
Drosophila.melanogaster.MAK ENGNLI L DNHQQA Site 2794
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ------ - -----K  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ------ - -----I  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de VLPRGG R GRGVPY Site 2827
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep RLPINK K KREFDD Site 2523
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d PAAAEG Q SKRCRP Site 2523
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SLEASA G PLGCCR Site 2523
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SLDAST G PLEGCR Site 2520
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ------ - ----SI  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ------ - ----SL  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 DKEKQN G KPLIAD Site 2524
Candida.parapsilosis.IME2 ------ - ------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p TSLRSE S KRFKGN Site 2523
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen QSTDAT P TLTNSS Site 2523
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. GVVKDQ P SAQMQQ Site 2522
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -----P A AAGAQQ Site 2523
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ------ - -----K  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a DLVQTE A FSKERW Site 2793
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d SGRPAF R VVDTEF Site 2523
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -----P A AAGAQQ Site 2523
Yarrowia.lipolytica.SSN3..Serine.threonine.protein QGGDNL H PRKKQK Site 2523
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. SIKDEF E GTCPLP Site 2522
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ------ Q STAASS Site 2728
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -----S D AKIDGA Site 2523
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH LASHTD L LAKVSL Site 2524
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD TTTTTT T TTTSNH Site 2696
Candida.orthopsilosis.IME2 ------ - ------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot SIEQGT L KKKLVF Site 2523
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str YRTHDV Y GVGQRR Site 2523
Debaryomyces.hansenii.IME2 ADISFG S SHGIKC Site 2760
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati DIVRKL Q PAVKTT Site 2522
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SSSSNG P IRKKKR Site 2522
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE RTNRAA S PNDHIF Site 2526
Caenorhabditis.briggsae.CDK1 ------ - --LQLE  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -----Q M NPNNQQ Site 2243
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de LNPELI R PFIPEG Site 2523
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------ V LPKLIS Site 2523
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. MSSSQN S SEVNAS Site 2523
Monosiga.brevicollis.CDK1 ------ - --RIAG  
Saccharomyces.cerevisiae.SKY1 PGWFEE V RDHKRH Site 2521
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP KELLYE E IIKPLQ Site 2523
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U AQSGPY H SIKPSA Site 2523
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GATNAG G ANVTDS Site 2743
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas DQTADQ E GRVKQN Site 2523
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ALGHLP L LEGHHV Site 2760
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d DSEADL P RMEHQH Site 2768
Dictyostelium.discoideum.CDK10..Probable.cyclin.de SQNNNM D SYKYSK Site 2523
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d LLTYHE N AALTGK Site 2930
Ajellomyces.capsulatus.CDK1 SAYSGR E RLQPYP Site 2523
Dictystelium.discoideum.MAPK3..Extracellular.signa QIHQQV N QQSIKN Site 2526
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep LPPSQN T SELNTA Site 2523
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep SLGTES Q SRRGRP Site 2523
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SLEAAA G PLGCCR Site 2523
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. RKDSRR R SGMKLQ Site 2523
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ------ - -----L  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri AWHSSK V SKKEER Site 2522
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SLEASA G PLGCCR Site 2523
Saccharomyces.cerevisiae.CDK1 ------ - ------  
Lodderomyces.elongisporus.IME2 TVSFDS E DILNLH Site 2736
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen FEPPVF D VDEMES Site 2523
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------ - ---ISR  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar EPQPKS R PTLQIP Site 2866
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. SSNDIY R LTGKLI Site 2522
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D DDIQEA D SLPESN Site 2895
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ------ - ----KK  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U PLTPPK V NQYPYI Site 2816
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d CSTKRF N YHFPNI Site 2523
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PSDATT A TLASSS Site 2523
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ------ - --LELF  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------ - ---NPE  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro NIVQPA A RKKARI Site 2523
Salmo.salar.CDK1 ------ - MPHLRL  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d GMDQKD I AKKLSF Site 2519
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d LNPELI R PFILEG Site 2523
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SSSKTF E KKRGKK Site 2523
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TNNAAS A SASNST Site 2523
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SPQLGC T TSGGLE Site 2773
Aspergillus.fumigatus.IME2 EERDWM N TTSSNF Site 2789
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan QQPPQY S HQTHRY Site 2692
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------ - ---GNK  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha AQKDSK K RSGMSL Site 2527
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S AQASEL P PSPQAW Site 2522
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PLSPAK V NQYPYI Site 2930
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ETARFQ P GVLEAP Site 2523
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d TGHGKN R RQSMLF Site 2523
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. PATSEG Q SKRCKP Site 2523
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de NNLRKF N YHLPNI Site 2523
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S MDYEAH N TNNRTR Site 2521
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. LLPFAS P PLPAPL Site 2526
Candida.glabrata.IME2 FSNPCH A IGNITF Site 2782
Homo.sapiens.MAK..Serine.threonine.protein.kinase. GRTDWV A KYGGHR Site 2790
Schizosaccharomyces.pombe.IME2 DRSKTH V STQLLP Site 2818
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P LKKMLY E EIMKPL Site 2522
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ------ - -----H  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom RTTSFL Q HVGGHH Site 2786
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. KQTDKT K SNMKGF Site 2523
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d HPGRGK S RRQSIF Site 2524
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d QVVQLK F DHLPNI Site 2522
Branchiostoma.floridae.CDK1 ------ - VPNLKG  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------ - ---ISR  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH DFVPIP I HRARID Site 2522
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD GTQKQS Q TKLPKL Site 2690
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR VSATGG D MAGPSA Site 2523
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ------ - ------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. GRTDWA S KYASRR Site 2808
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ------ - ---PSR  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ------ Q SPVASS Site 2777
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------ - VPHLRL  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PMLLAD L PDLQEP Site 2807
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. FVPPPL D QEEMES Site 2523
Lachancea.thermotolerans.SKY1 PGWSQE V TGHPRH Site 2521
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a PHKTYS S ILKHLN Site 2841
Dictyostelium.discoideum.CDK1 ------ - ---SFF  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RQLGAR V PKETAL Site 2527
Xenopus.tropicalis.IME2 ------ - -TPHLI  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PLSPTN I NQYSYL Site 2930
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -----P A AAGAQQ Site 2523
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------ - -TPHLI  
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------ - QQRHCR  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. RKRHHL V GVNKCW Site 2523
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD PTKPDT T APTLST Site 2523
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ------ Q SPVASS Site 2777
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TNNAAS A SASNST Site 2523
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ESDDDD F EEEDEN Site 2746
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD AENQRK T STITLS Site 2522
Encephalitozoon.cuniculi.CDK1 ------ - ---IME  
Saccharomyces.kluyveri.IME2 QHHSFT H VNGLTF Site 2772
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ------ - ----RK  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a FEETAR F QPGYRS Site 2523
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. QKGHHP A QFSKCW Site 2523
Cryptococcus.neoformans.IME2 FEGRNK Q SQPPQQ Site 2829
Homo.sapiens.HIPK4..Homeodomain.interacting.protei GATSFL Q HVTGHH Site 2787
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ------ - -----S  
Candida.lusitaniae.IME2 FANSSF D SHKIAC Site 2709
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PLSPTK I SQYSYL Site 2930
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A FNNQQQ G GFQQRY Site 2728
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep DPSLIQ K HAMSCS Site 2523
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. HNKYKF D HHLPNI Site 2522
Gallus.gallus.CDK2 ------ - VPHLRL  
Emericella.nidulans.CDK1 SYYSGR A RRNGFH Site 2522
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. QCRLPT I VRKGGR Site 2696
Homo.sapiens.CDK1 ------ - --IKKM  
Candida.albicans.CDK1 EDNIGI D KHQNMQ Site 2523
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -----P T AAGAQP Site 2523
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PMLLSD L PDLQEP Site 2807
Mus.musculus.ICK..Serine.threonine.protein.kinase. GRIDWS S KYPSRR Site 2808
Saccharomyces.castelli.IME2 LMNPNS F FGNLTF Site 2787
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ------ - ---TRK  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ALEQGI L PKKLIF Site 2522
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. NNSYGK S LSNSKH Site 2523
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly VPEWYR G EGAGAA Site 2524
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ADLLDK D VLLISE Site 2523
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli SIEQGT L KKKLVF Site 2522
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho PATTNQ T EFERVF Site 2522
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PLSPAK V NQYPYI Site 2930
Acyrthosiphon.pisum.CDK1 ------ A SLPETP Site 2237
Candida.tropicalis.CDK1 TTFSME S EEIANL Site 2729
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin MMFNQQ Q NFQRFN Site 2682
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G LHKPGH N SSELNH Site 2524
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -----Q G PISTTE Site 2524
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de SGRPAF R VVDTEF Site 2523
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -----E T SRMRSQ Site 2523
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d TGHGKN R RQSMLF Site 2523
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA ARKDSK K RSGMSL Site 2527
Candida.albicans.SSN3..Serine.threonine.protein.ki IDDLPG G IRKKRG Site 2695
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF TDKYVS P YGQQRR Site 2739
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ATASSA T GGSSSK Site 2523
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara RRDSKR R NTLTMS Site 2523
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SFHENS N VDDTPK Site 2766
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -----A A AAGATQ Site 2523
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PMSPTK L SQYPYM Site 2930
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d GASAAG P GFSLKF Site 2525
Candida.dubliniensis.IME2 TTFSLD S EEVVNL Site 2728
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SLDAST G PLEGCR Site 2523
Aspergillus.niger.IME2 APAKFL T GSATYR Site 2800
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge FVPPPL D SEEMES Site 2523
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d EGKNLK R NRFFFW Site 2789
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. NNSYGK S LSNSKH Site 2523
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -----P A ATGAQQ Site 2523
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ------ D YPNNKL Site 2753
Schizosaccharomyces.japonicus.IME2 ASTLRI P KSAHGA Site 2784
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. ELTDYA R THDIYS Site 2523
Gallus.gallus.CDK1 ------ - --IKKF  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ------ - -----P  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P TPMPKQ E MMAKLD Site 2524
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE KPRVLR Q LRFNNL Site 2524
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. VSTTSG D VAGPSA Site 2523
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. RQLGAR V SKETPL Site 2527
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ------ - -----E  
Kluyveromyces.waltii.IME2 HDHSFS H TNSITF Site 2761
Debaryomyces.hansenii.SKY1 GSGEDI P GWSKEV Site 2523
Saccharomyces.cerevisiae.IME2 LSNSNQ H FGNVTF Site 2745
Schizosaccharomyces.japonicus.b.IME2 RSPSFR D AIAPSI Site 2819
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un PSGQKG V DEGSAG Site 2520
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -----S S GLTTAR Site 2523
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a PHQTYS S ILKHLN Site 2841
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep LPSNQS T SELNTA Site 2523
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST RLKHFV S APSSSL Site 2523
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk FEPLVA D SKETSV Site 2523
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de GKNLKR N RFFFSR Site 2796
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act IRGQPA S LAQVQQ Site 2523
Candida.albicans.IME2 TTFSLD S EEVVNL Site 2728
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d HFTHIC T ATDEVK Site 2523
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k LLMPTW P SSHKKT Site 2522
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. FVPPPL D QEEMES Site 2523
Kluyveromyces.lactis.IME2 NSHNHT F QDGLSF Site 2795
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PMLLAD L PDLQDP Site 2807
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SLEASA G PLGCCR Site 2523
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. EPPKPP G SLEIEQ Site 2527
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 DKEKQN G KPLIAD Site 2524
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. EPSQLP G THEIEQ Site 2527
Amphimedon.queenslandica.CDK1 ------ - ------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d RNRRRQ Q VLPLKS Site 2523
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------ - LRRDYR  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME RQLAMG P GFSLKF Site 2697
Neurospora.crassa.IME2 SASASI W AAGSRI Site 2813
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------ - ---SGH  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ------ T APSTPS Site 2523
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------ - ---DAE  
Hydra.magnipapillata.CDK1 ------ - ----NM  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar STGTET Q AKRAKP Site 2523
Ashbya.gossypii.IME2 PTPNHS F EDGLSF Site 2802
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi SSSKTF D KKRERK Site 2523
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------ V LPKLIS Site 2523
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LSSVKK K LYPKSK Site 2523
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace AHTSRG P ASPPSV Site 2771
Schizosaccharomyces.pombe.b.IME2 KFETSK S LHLSSP Site 2756
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a FEETAR F QPGYRS Site 2522
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PLSPTK L SQYPYM Site 2930
Schizosaccharomyces.pombe.CDK1 ------ - -----H  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ------ - ---ISR  
Saccoglossus.kowalevskii.CDK1 ------ - PEHLPK  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas RVASSG L QSVVHR Site 2523
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac IRGQPS P LAQVQQ Site 2670
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------ - AGRSSR  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable QEAPLQ G EPLFRP Site 2788
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------ - LQRFRH  
Yarrowia.lipolytica.IME2 GAGAIS S NNIEVE Site 2799
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil NASDEP S RKKNRR Site 2523
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------ - VPPLRL  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K DQRRED H FTGVVE Site 2523
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly TPMNKS E MMAKLD Site 2524
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk DFVPIP I HRARID Site 2522
Species Residue at Site 4917
in 'msaprobs'
muscle

The residue for every species at site 4917 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ------ D YPNNKL Site 2739
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QPSEMP P SPLVWE Site 2522
Scheffersomyces.stipitis.SKY1 GSGEDI P GWSKEL Site 2523
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ------ - -----P  

Generated by PhyloBot at 20:14, October 20th 2020
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