cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4916 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4916 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4916 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4916 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 VPGLTLKSDS H VTSETIS Site 2829
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ------- - ---PFLN  
Danio.rerio.CDK1 ------- - -VPPLRL  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge LIYREAL A FNPEYQQ Site 2521
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ------- - ------P  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ------- - -NSRTLL  
Candida.guilliermondii.IME2 FSFSGSC V SLAQLMG Site 2522
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RSLELLS L GGGGKRK Site 2725
Chlamydomonas.reinhardtii.LF4 PYSLRQL A GQNAGQG Site 2818
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g NNFEPIV V KQADADS Site 2522
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 DKDKEKQ N GKPLIAD Site 2523
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 SNKSSKG F FSKLGCC Site 2730
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho TSQQPPQ Y SHQTHRY Site 2691
Schizosaccharomyces.octosporus.b.IME2 PVRINRS T SEGFSKG Site 2799
Candida.albicans.MAPK3..Extracellular.signal.regul EDLKKLL Y EEIMKPL Site 2521
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ------- E SSRMRTQ Site 2522
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 GGKDISL F SNSRNRR Site 2522
Suberites.domuncula.JNK..Stress.activated.protein. QWKTRIY E EVKTYNS Site 2523
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ------- - ----PSR  
Aedes.aegypti.CDK1 ------- - -------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ------- - -----HT  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ------- - ----ISR  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ------- - NVLPPIV  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei GYPLSPT K ISQYSYL Site 2929
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar YFCKTRK S NYHFPNI Site 2522
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ------- - ----FNN  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ------- S SGLTAAR Site 2522
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM EETLKFK E RQPDNAP Site 2519
Strongylocentrotus.purpuratus.CDK1 ------- - -PPRLPT  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca PHTRGSY S PGPSNRT Site 2522
Drosophila.melanogaster.CDK1 ------- - ---LVRN  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 GLQSQNM M NSYYQNR Site 2735
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. VVPQSSS T TTKPPAK Site 2702
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH AENVDDQ M NNLHIKG Site 2522
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d FQQPGRG K NRRQSIF Site 2523
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. WYTTVLI G TQHYSHI Site 2524
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DSSLETS A GPLGCCR Site 2522
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 SDDSGAD L PQMEHQH Site 2760
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DSSLETS A GPLGCCR Site 2522
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. PIARKDS R RRSGMKL Site 2526
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo VAQPSEM P PSPLVWE Site 2521
Bombus.terrestris.CDK1 ------- - -PLPKKT  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ------- - ------S  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar QQKTTNN G TRGGPRR Site 2774
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. DSSLETS A GTLGCCR Site 2522
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d TRVPPRG G RGRGVPY Site 2828
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. KHYHLPT I NRKGGEY Site 2696
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. VEAMTEA Q REYLLKK Site 2521
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G IEVMSEA Q KAKLVRK Site 2521
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 DKDKEKQ N GKPLIAD Site 2523
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 KGIDNLQ V SDEHHPH Site 2710
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO HAAHFAP T NIWYGAE Site 2928
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ------- E TSRMRSQ Site 2522
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl VAQPSEM P PSPLVWE Site 2521
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 YYCDTKK L NYRFPNI Site 2522
Homo.sapiens.HIPK3..Homeodomain.interacting.protei GFPLSPT K LSQYPYM Site 2929
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O NQGASAA G PGFSLKF Site 2524
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d RTRMPNL N DLKETAL Site 2920
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ------- - ----ISR  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O NQGASAA G PGFSLKF Site 2524
Naegleria.gruberi.LF4 PIEKQQK K YSLHYMI Site 2747
Saccharomyces.bayanus.IME2 THLSNQN Q HFGNVTF Site 2744
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ------- S SGLTAAR Site 2522
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a FQPAPAV A ESKETAL Site 2522
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki IQVDNVE Q TQQAQQV Site 2522
Dictyostelium.discoideum.DYRK1..Probable.serine.th ------- - PHNNNNI  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ------- - QSTAASS  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ------- - VLPKLVS  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d PDEVIFL A SHEKWKQ Site 2899
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RSALGRL P LLPGPRA Site 2756
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific DVSECVK S SSQTLWK Site 2522
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ------- - NILPPIV  
Aspergillus.nidulans.IME2 MNPASTK F LTGSTYR Site 2796
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ------- - -----CS  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se SVAQASE L PPSPQAW Site 2521
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. VHGRTDW V AKYGGHR Site 2789
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ------- - -VPHLRL  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DSSLEAS A GPLGCCR Site 2522
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. LVPEHAR K QCPFLGL Site 2523
Penicillium.marneffei.IME2 ASSVANS I LSGSTYR Site 2799
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen EIEEWKS K IYIQNRN Site 2522
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a PGDLVQT E AFSKERW Site 2792
Drosophila.melanogaster.MAK VAENGNL I LDNHQQA Site 2793
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ------- - ------K  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ------- - ------I  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ARVLPRG G RGRGVPY Site 2826
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep PPRLPIN K KKREFDD Site 2522
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d AAPAAAE G QSKRCRP Site 2522
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DSSLEAS A GPLGCCR Site 2522
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DSSLDAS T GPLEGCR Site 2519
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ------- - -----SI  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ------- - -----SL  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 DKDKEKQ N GKPLIAD Site 2523
Candida.parapsilosis.IME2 ------- - -------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p LSTSLRS E SKRFKGN Site 2522
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen DWQSTDA T PTLTNSS Site 2522
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. KNGVVKD Q PSAQMQQ Site 2521
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ------- P AAAGAQQ Site 2522
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ------- - ------K  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PGDLVQT E AFSKERW Site 2792
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d PDSGRPA F RVVDTEF Site 2522
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ------- P AAAGAQQ Site 2522
Yarrowia.lipolytica.SSN3..Serine.threonine.protein GSQGGDN L HPRKKQK Site 2522
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. GMSIKDE F EGTCPLP Site 2521
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ------- - QSTAASS  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ------- S DAKIDGA Site 2522
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH HELASHT D LLAKVSL Site 2523
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD NNTTTTT T TTTTSNH Site 2695
Candida.orthopsilosis.IME2 ------- - -------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot RDSIEQG T LKKKLVF Site 2522
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str NYYRTHD V YGVGQRR Site 2522
Debaryomyces.hansenii.IME2 IIADISF G SSHGIKC Site 2759
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati PADIVRK L QPAVKTT Site 2521
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SGSSSSN G PIRKKKR Site 2521
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE RRRTNRA A SPNDHIF Site 2525
Caenorhabditis.briggsae.CDK1 ------- - ---LQLE  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ------- Q MNPNNQQ Site 2242
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de SLLNPEL I RPFIPEG Site 2522
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ------- - VLPKLIS  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. SHMSSSQ N SSEVNAS Site 2522
Monosiga.brevicollis.CDK1 ------- - ---RIAG  
Saccharomyces.cerevisiae.SKY1 DIPGWFE E VRDHKRH Site 2520
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP DLKELLY E EIIKPLQ Site 2522
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U NGAQSGP Y HSIKPSA Site 2522
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AIGATNA G GANVTDS Site 2742
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas RFDQTAD Q EGRVKQN Site 2522
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. HSALGHL P LLEGHHV Site 2759
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d SDDSEAD L PRMEHQH Site 2767
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KTSQNNN M DSYKYSK Site 2522
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d AALLTYH E NAALTGK Site 2929
Ajellomyces.capsulatus.CDK1 --SAYSG R ERLQPYP Site 2522
Dictystelium.discoideum.MAPK3..Extracellular.signa KQQIHQQ V NQQSIKN Site 2525
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep SHLPPSQ N TSELNTA Site 2522
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ATSLGTE S QSRRGRP Site 2522
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac DSSLEAA A GPLGCCR Site 2522
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. IARKDSR R RSGMKLQ Site 2522
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ------- - ------L  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri STAWHSS K VSKKEER Site 2521
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DSSLEAS A GPLGCCR Site 2522
Saccharomyces.cerevisiae.CDK1 ------- - -------  
Lodderomyces.elongisporus.IME2 ISTVSFD S EDILNLH Site 2735
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ISFEPPV F DVDEMES Site 2522
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ------- - ----ISR  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar RQEPQPK S RPTLQIP Site 2865
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. GLSSNDI Y RLTGKLI Site 2521
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D TEDDIQE A DSLPESN Site 2894
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ------- - -----KK  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U GYPLTPP K VNQYPYI Site 2815
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d YHCSTKR F NYHFPNI Site 2522
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen WQPSDAT T ATLASSS Site 2522
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ------- - ---LELF  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ------- - ----NPE  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro SGNIVQP A ARKKARI Site 2522
Salmo.salar.CDK1 ------- - -MPHLRL  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d TEGMDQK D IAKKLSF Site 2518
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d SLLNPEL I RPFILEG Site 2522
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi NSSSSKT F EKKRGKK Site 2522
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen GQTNNAA S ASASNST Site 2522
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable GGSPQLG C TTSGGLE Site 2772
Aspergillus.fumigatus.IME2 PYEERDW M NTTSSNF Site 2788
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan TSQQPPQ Y SHQTHRY Site 2691
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ------- - ----GNK  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha PIAQKDS K KRSGMSL Site 2526
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S SVAQASE L PPSPQAW Site 2521
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma GYPLSPA K VNQYPYI Site 2929
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina FQETARF Q PGVLEAP Site 2522
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d PETGHGK N RRQSMLF Site 2522
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. AAPATSE G QSKRCKP Site 2522
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de NYNNLRK F NYHLPNI Site 2522
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EVMDYEA H NTNNRTR Site 2520
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. SPLLPFA S PPLPAPL Site 2525
Candida.glabrata.IME2 FAFSNPC H AIGNITF Site 2781
Homo.sapiens.MAK..Serine.threonine.protein.kinase. VHGRTDW V AKYGGHR Site 2789
Schizosaccharomyces.pombe.IME2 IIDRSKT H VSTQLLP Site 2817
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P DDLKKML Y EEIMKPL Site 2521
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ------- - ------H  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom PPRTTSF L QHVGGHH Site 2785
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. TGKQTDK T KSNMKGF Site 2522
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d FQHPGRG K SRRQSIF Site 2523
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d RKQVVQL K FDHLPNI Site 2521
Branchiostoma.floridae.CDK1 ------- - -VPNLKG  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ------- - ----ISR  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LDDFVPI P IHRARID Site 2521
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD KAGTQKQ S QTKLPKL Site 2689
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR NEVSATG G DMAGPSA Site 2522
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ------- - -------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. VHGRTDW A SKYASRR Site 2807
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ------- - ----PSR  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ------- - QSPVASS  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ------- - -VPHLRL  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act DSPMLLA D LPDLQEP Site 2806
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. ISFVPPP L DQEEMES Site 2522
Lachancea.thermotolerans.SKY1 DIPGWSQ E VTGHPRH Site 2520
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a QIPHKTY S SILKHLN Site 2840
Dictyostelium.discoideum.CDK1 ------- - ----SFF  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. PPRQLGA R VPKETAL Site 2526
Xenopus.tropicalis.IME2 ------- - --TPHLI  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U GYPLSPT N INQYSYL Site 2929
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ------- P AAAGAQQ Site 2522
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ------- - --TPHLI  
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ------- - -QQRHCR  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. SYRKRHH L VGVNKCW Site 2522
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD TNPTKPD T TAPTLST Site 2522
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ------- - QSPVASS  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen GQTNNAA S ASASNST Site 2522
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ASESDDD D FEEEDEN Site 2745
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD KKAENQR K TSTITLS Site 2521
Encephalitozoon.cuniculi.CDK1 ------- - ----IME  
Saccharomyces.kluyveri.IME2 QEQHHSF T HVNGLTF Site 2771
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ------- - -----RK  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a LIFEETA R FQPGYRS Site 2522
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. SYQKGHH P AQFSKCW Site 2522
Cryptococcus.neoformans.IME2 YAFEGRN K QSQPPQQ Site 2828
Homo.sapiens.HIPK4..Homeodomain.interacting.protei PRGATSF L QHVTGHH Site 2786
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ------- - ------S  
Candida.lusitaniae.IME2 ESFANSS F DSHKIAC Site 2708
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom GYPLSPT K ISQYSYL Site 2929
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A MMFNNQQ Q GGFQQRY Site 2727
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep VVDPSLI Q KHAMSCS Site 2522
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. KKHNKYK F DHHLPNI Site 2521
Gallus.gallus.CDK2 ------- - -VPHLRL  
Emericella.nidulans.CDK1 --SYYSG R ARRNGFH Site 2521
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. PQQCRLP T IVRKGGR Site 2695
Homo.sapiens.CDK1 ------- - ---IKKM  
Candida.albicans.CDK1 YNEDNIG I DKHQNMQ Site 2522
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ------- P TAAGAQP Site 2522
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a DSPMLLS D LPDLQEP Site 2806
Mus.musculus.ICK..Serine.threonine.protein.kinase. VHGRIDW S SKYPSRR Site 2807
Saccharomyces.castelli.IME2 CSLMNPN S FFGNLTF Site 2786
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ------- - ----TRK  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep AEALEQG I LPKKLIF Site 2521
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. GKNNSYG K SLSNSKH Site 2522
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly RLVPEWY R GEGAGAA Site 2523
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS SEADLLD K DVLLISE Site 2522
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli RDSIEQG T LKKKLVF Site 2521
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho RNPATTN Q TEFERVF Site 2521
Homo.sapiens.HIPK2..Homeodomain.interacting.protei GYPLSPA K VNQYPYI Site 2929
Acyrthosiphon.pisum.CDK1 ------- - ASLPETP  
Candida.tropicalis.CDK1 SFTTFSM E SEEIANL Site 2728
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQMMFNQ Q QNFQRFN Site 2681
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SSLHKPG H NSSELNH Site 2523
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ------- Q GPISTTE Site 2523
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de PDSGRPA F RVVDTEF Site 2522
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ------- E TSRMRSQ Site 2522
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d PETGHGK N RRQSMLF Site 2522
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA PIARKDS K KRSGMSL Site 2526
Candida.albicans.SSN3..Serine.threonine.protein.ki SGIDDLP G GIRKKRG Site 2694
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF HRTDKYV S PYGQQRR Site 2738
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TSATASS A TGGSSSK Site 2522
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara FPRRDSK R RNTLTMS Site 2522
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SPSFHEN S NVDDTPK Site 2765
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ------- A AAAGATQ Site 2522
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U GFPMSPT K LSQYPYM Site 2929
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d NQGASAA G PGFSLKF Site 2524
Candida.dubliniensis.IME2 SFTTFSL D SEEVVNL Site 2727
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DSSLDAS T GPLEGCR Site 2522
Aspergillus.niger.IME2 KPAPAKF L TGSATYR Site 2799
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge TCFVPPP L DSEEMES Site 2522
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d HCEGKNL K RNRFFFW Site 2788
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. GKNNSYG K SLSNSKH Site 2522
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ------- P AATGAQQ Site 2522
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ------- - DYPNNKL  
Schizosaccharomyces.japonicus.IME2 SLASTLR I PKSAHGA Site 2783
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. FRELTDY A RTHDIYS Site 2522
Gallus.gallus.CDK1 ------- - ---IKKF  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ------- - ------P  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P NFTPMPK Q EMMAKLD Site 2523
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE SVKPRVL R QLRFNNL Site 2523
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. GEVSTTS G DVAGPSA Site 2522
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. PPRQLGA R VSKETPL Site 2526
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ------- - ------E  
Kluyveromyces.waltii.IME2 ENHDHSF S HTNSITF Site 2760
Debaryomyces.hansenii.SKY1 VGGSGED I PGWSKEV Site 2522
Saccharomyces.cerevisiae.IME2 PHLSNSN Q HFGNVTF Site 2744
Schizosaccharomyces.japonicus.b.IME2 ASRSPSF R DAIAPSI Site 2818
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un HRPSGQK G VDEGSAG Site 2519
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ------- S SGLTTAR Site 2522
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a QIPHQTY S SILKHLN Site 2840
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep SHLPSNQ S TSELNTA Site 2522
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST EERLKHF V SAPSSSL Site 2522
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk TSFEPLV A DSKETSV Site 2522
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de CEGKNLK R NRFFFSR Site 2795
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act GVIRGQP A SLAQVQQ Site 2522
Candida.albicans.IME2 SFTTFSL D SEEVVNL Site 2727
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d QEHFTHI C TATDEVK Site 2522
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k DPLLMPT W PSSHKKT Site 2521
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. ISFVPPP L DQEEMES Site 2522
Kluyveromyces.lactis.IME2 TSNSHNH T FQDGLSF Site 2794
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina DSPMLLA D LPDLQDP Site 2806
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DSSLEAS A GPLGCCR Site 2522
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. PPEPPKP P GSLEIEQ Site 2526
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 DKDKEKQ N GKPLIAD Site 2523
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. PLEPSQL P GTHEIEQ Site 2526
Amphimedon.queenslandica.CDK1 ------- - -------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d EGRNRRR Q QVLPLKS Site 2522
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ------- - -LRRDYR  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME TQRQLAM G PGFSLKF Site 2696
Neurospora.crassa.IME2 AASASAS I WAAGSRI Site 2812
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ------- - ----SGH  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ------- - TAPSTPS  
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ------- - ----DAE  
Hydra.magnipapillata.CDK1 ------- - -----NM  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar STSTGTE T QAKRAKP Site 2522
Ashbya.gossypii.IME2 HEPTPNH S FEDGLSF Site 2801
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi DSSSSKT F DKKRERK Site 2522
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ------- - VLPKLIS  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p DELSSVK K KLYPKSK Site 2522
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace LRAHTSR G PASPPSV Site 2770
Schizosaccharomyces.pombe.b.IME2 HAKFETS K SLHLSSP Site 2755
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a LIFEETA R FQPGYRS Site 2521
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom GFPLSPT K LSQYPYM Site 2929
Schizosaccharomyces.pombe.CDK1 ------- - ------H  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ------- - ----ISR  
Saccoglossus.kowalevskii.CDK1 ------- - -PEHLPK  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas PGRVASS G LQSVVHR Site 2522
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac GVIRGQP S PLAQVQQ Site 2669
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ------- - -AGRSSR  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable AGQEAPL Q GEPLFRP Site 2787
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ------- - -LQRFRH  
Yarrowia.lipolytica.IME2 KIGAGAI S SNNIEVE Site 2798
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GNNASDE P SRKKNRR Site 2522
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ------- - -VPPLRL  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K DRDQRRE D HFTGVVE Site 2522
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly NFTPMNK S EMMAKLD Site 2523
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LDDFVPI P IHRARID Site 2521
Species Residue at Site 4916
in 'msaprobs'
muscle

The residue for every species at site 4916 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ------- - DYPNNKL  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo VAQPSEM P PSPLVWE Site 2521
Scheffersomyces.stipitis.SKY1 VGGSGED I PGWSKEL Site 2522
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ------- - ------P  

Generated by PhyloBot at 08:13, June 1st 2020
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