cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4915 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4915 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4915 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4915 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 GVPGLTLKSD S HVTSETIS Site 2828
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD -------- - ----PFLN  
Danio.rerio.CDK1 -------- - --VPPLRL  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge KELIYREA L AFNPEYQQ Site 2520
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d -------- - -------P  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK -------- - --NSRTLL  
Candida.guilliermondii.IME2 GTFSFSGS C VSLAQLMG Site 2521
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ LHRSLELL S LGGGGKRK Site 2724
Chlamydomonas.reinhardtii.LF4 ISPYSLRQ L AGQNAGQG Site 2817
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g DINNFEPI V VKQADADS Site 2521
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 QLDKDKEK Q NGKPLIAD Site 2522
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 RNSNKSSK G FFSKLGCC Site 2729
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SATSQQPP Q YSHQTHRY Site 2690
Schizosaccharomyces.octosporus.b.IME2 SSPVRINR S TSEGFSKG Site 2798
Candida.albicans.MAPK3..Extracellular.signal.regul TIEDLKKL L YEEIMKPL Site 2520
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. -------- - ESSRMRTQ  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 GIGGKDIS L FSNSRNRR Site 2521
Suberites.domuncula.JNK..Stress.activated.protein. LDQWKTRI Y EEVKTYNS Site 2522
Homo.sapiens.CLK3..Dual.specificity.protein.kinase -------- - -----PSR  
Aedes.aegypti.CDK1 -------- - --------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci -------- - ------HT  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase -------- - -----ISR  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos -------- - -NVLPPIV  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei YTGYPLSP T KISQYSYL Site 2928
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar KKYFCKTR K SNYHFPNI Site 2521
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 -------- - -----FNN  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. -------- - SSGLTAAR  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM IFEETLKF K ERQPDNAP Site 2518
Strongylocentrotus.purpuratus.CDK1 -------- - --PPRLPT  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca IDPHTRGS Y SPGPSNRT Site 2521
Drosophila.melanogaster.CDK1 -------- - ----LVRN  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 SMGLQSQN M MNSYYQNR Site 2734
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. KVVVPQSS S TTTKPPAK Site 2701
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -DAENVDD Q MNNLHIKG Site 2521
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LAFQQPGR G KNRRQSIF Site 2522
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. FHWYTTVL I GTQHYSHI Site 2523
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DTDSSLET S AGPLGCCR Site 2521
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 PLSDDSGA D LPQMEHQH Site 2759
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DTDSSLET S AGPLGCCR Site 2521
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. FSPIARKD S RRRSGMKL Site 2525
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo STVAQPSE M PPSPLVWE Site 2520
Bombus.terrestris.CDK1 -------- - --PLPKKT  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 -------- - -------S  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ASQQKTTN N GTRGGPRR Site 2773
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. DTDSSLET S AGTLGCCR Site 2521
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GPTRVPPR G GRGRGVPY Site 2827
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. HLKHYHLP T INRKGGEY Site 2695
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. DEVEAMTE A QREYLLKK Site 2520
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G SEIEVMSE A QKAKLVRK Site 2520
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 QLDKDKEK Q NGKPLIAD Site 2522
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 VVKGIDNL Q VSDEHHPH Site 2709
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO SKHAAHFA P TNIWYGAE Site 2927
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C -------- - ETSRMRSQ  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl STVAQPSE M PPSPLVWE Site 2520
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 KKYYCDTK K LNYRFPNI Site 2521
Homo.sapiens.HIPK3..Homeodomain.interacting.protei YTGFPLSP T KLSQYPYM Site 2928
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O TTNQGASA A GPGFSLKF Site 2523
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d AARTRMPN L NDLKETAL Site 2919
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci -------- - -----ISR  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O TTNQGASA A GPGFSLKF Site 2523
Naegleria.gruberi.LF4 NEPIEKQQ K KYSLHYMI Site 2746
Saccharomyces.bayanus.IME2 FETHLSNQ N QHFGNVTF Site 2743
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. -------- - SSGLTAAR  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a LTFQPAPA V AESKETAL Site 2521
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki EPIQVDNV E QTQQAQQV Site 2521
Dictyostelium.discoideum.DYRK1..Probable.serine.th -------- - -PHNNNNI  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos -------- - -QSTAASS  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos -------- - -VLPKLVS  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d SQPDEVIF L ASHEKWKQ Site 2898
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a VCRSALGR L PLLPGPRA Site 2755
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific KLDVSECV K SSSQTLWK Site 2521
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos -------- - -NILPPIV  
Aspergillus.nidulans.IME2 DWMNPAST K FLTGSTYR Site 2795
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi -------- - ------CS  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se SSSVAQAS E LPPSPQAW Site 2520
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. PSVHGRTD W VAKYGGHR Site 2788
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep -------- - --VPHLRL  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DTDSSLEA S AGPLGCCR Site 2521
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. VKLVPEHA R KQCPFLGL Site 2522
Penicillium.marneffei.IME2 EWASSVAN S ILSGSTYR Site 2798
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen DLEIEEWK S KIYIQNRN Site 2521
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a EHPGDLVQ T EAFSKERW Site 2791
Drosophila.melanogaster.MAK WMVAENGN L ILDNHQQA Site 2792
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH -------- - -------K  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr -------- - -------I  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GAARVLPR G GRGRGVPY Site 2825
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep PYPPRLPI N KKKREFDD Site 2521
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d KRAAPAAA E GQSKRCRP Site 2521
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DTDSSLEA S AGPLGCCR Site 2521
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DTDSSLDA S TGPLEGCR Site 2518
Homo.sapiens.CLK1..Dual.specificity.protein.kinase -------- - ------SI  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis -------- - ------SL  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 QLDKDKEK Q NGKPLIAD Site 2522
Candida.parapsilosis.IME2 -------- - --------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p RVLSTSLR S ESKRFKGN Site 2521
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen SSDWQSTD A TPTLTNSS Site 2521
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. RSKNGVVK D QPSAQMQQ Site 2520
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki -------- - PAAAGAQQ  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U -------- - -------K  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a EHPGDLVQ T EAFSKERW Site 2791
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d SMPDSGRP A FRVVDTEF Site 2521
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. -------- - PAAAGAQQ  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein KRGSQGGD N LHPRKKQK Site 2521
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. KSGMSIKD E FEGTCPLP Site 2520
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos -------- - -QSTAASS  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE -------- - SDAKIDGA  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH TSHELASH T DLLAKVSL Site 2522
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD TTNNTTTT T TTTTTSNH Site 2694
Candida.orthopsilosis.IME2 -------- - --------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot RKRDSIEQ G TLKKKLVF Site 2521
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str LQNYYRTH D VYGVGQRR Site 2521
Debaryomyces.hansenii.IME2 FGIIADIS F GSSHGIKC Site 2758
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati EVPADIVR K LQPAVKTT Site 2520
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin IVSGSSSS N GPIRKKKR Site 2520
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE RSRRRTNR A ASPNDHIF Site 2524
Caenorhabditis.briggsae.CDK1 -------- - ----LQLE  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO -------- - QMNPNNQQ  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de EESLLNPE L IRPFIPEG Site 2521
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos -------- - -VLPKLIS  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. LDSHMSSS Q NSSEVNAS Site 2521
Monosiga.brevicollis.CDK1 -------- - ----RIAG  
Saccharomyces.cerevisiae.SKY1 -SDIPGWF E EVRDHKRH Site 2519
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP MLDLKELL Y EEIIKPLQ Site 2521
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U LCNGAQSG P YHSIKPSA Site 2521
Drosophila.melanogaster.GSK3..Protein.kinase.shagg TGAIGATN A GGANVTDS Site 2741
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas KNRFDQTA D QEGRVKQN Site 2521
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. VCHSALGH L PLLEGHHV Site 2758
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d PLSDDSEA D LPRMEHQH Site 2766
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NNKTSQNN N MDSYKYSK Site 2521
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d NQAALLTY H ENAALTGK Site 2928
Ajellomyces.capsulatus.CDK1 ----SAYS G RERLQPYP Site 2521
Dictystelium.discoideum.MAPK3..Extracellular.signa QQKQQIHQ Q VNQQSIKN Site 2524
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep LDSHLPPS Q NTSELNTA Site 2521
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep TPATSLGT E SQSRRGRP Site 2521
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac DTDSSLEA A AGPLGCCR Site 2521
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. SPIARKDS R RRSGMKLQ Site 2521
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO -------- - -------L  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri IRSTAWHS S KVSKKEER Site 2520
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DTDSSLEA S AGPLGCCR Site 2521
Saccharomyces.cerevisiae.CDK1 -------- - --------  
Lodderomyces.elongisporus.IME2 NSISTVSF D SEDILNLH Site 2734
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen EMISFEPP V FDVDEMES Site 2521
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un -------- - -----ISR  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar NARQEPQP K SRPTLQIP Site 2864
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. LQGLSSND I YRLTGKLI Site 2520
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D RPTEDDIQ E ADSLPESN Site 2893
Homo.sapiens.CLK4..Dual.specificity.protein.kinase -------- - ------KK  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U YTGYPLTP P KVNQYPYI Site 2814
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d KKYHCSTK R FNYHFPNI Site 2521
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen QDWQPSDA T TATLASSS Site 2521
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 -------- - ----LELF  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep -------- - -----NPE  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro PASGNIVQ P AARKKARI Site 2521
Salmo.salar.CDK1 -------- - --MPHLRL  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d KRTEGMDQ K DIAKKLSF Site 2517
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d EESLLNPE L IRPFILEG Site 2521
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SHNSSSSK T FEKKRGKK Site 2521
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen DRGQTNNA A SASASNST Site 2521
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable PPGGSPQL G CTTSGGLE Site 2771
Aspergillus.fumigatus.IME2 TPPYEERD W MNTTSSNF Site 2787
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SSTSQQPP Q YSHQTHRY Site 2690
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha -------- - -----GNK  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha FSPIAQKD S KKRSGMSL Site 2525
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S SSSVAQAS E LPPSPQAW Site 2520
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma YTGYPLSP A KVNQYPYI Site 2928
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina LIFQETAR F QPGVLEAP Site 2521
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d SYPETGHG K NRRQSMLF Site 2521
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. KRAAPATS E GQSKRCKP Site 2521
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de RRNYNNLR K FNYHLPNI Site 2521
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S YEEVMDYE A HNTNNRTR Site 2519
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. SLSPLLPF A SPPLPAPL Site 2524
Candida.glabrata.IME2 YEFAFSNP C HAIGNITF Site 2780
Homo.sapiens.MAK..Serine.threonine.protein.kinase. PSVHGRTD W VAKYGGHR Site 2788
Schizosaccharomyces.pombe.IME2 SKIIDRSK T HVSTQLLP Site 2816
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P SIDDLKKM L YEEIMKPL Site 2520
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl -------- - -------H  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom HGPPRTTS F LQHVGGHH Site 2784
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. TPTGKQTD K TKSNMKGF Site 2521
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LAFQHPGR G KSRRQSIF Site 2522
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d DGRKQVVQ L KFDHLPNI Site 2520
Branchiostoma.floridae.CDK1 -------- - --VPNLKG  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara -------- - -----ISR  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH VKLDDFVP I PIHRARID Site 2520
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD WSKAGTQK Q SQTKLPKL Site 2688
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR GPNEVSAT G GDMAGPSA Site 2521
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. -------- - --------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. QPVHGRTD W ASKYASRR Site 2806
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci -------- - -----PSR  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos -------- - -QSPVASS  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep -------- - --VPHLRL  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QMDSPMLL A DLPDLQEP Site 2805
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. EVISFVPP P LDQEEMES Site 2521
Lachancea.thermotolerans.SKY1 -ADIPGWS Q EVTGHPRH Site 2519
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a SPQIPHKT Y SSILKHLN Site 2839
Dictyostelium.discoideum.CDK1 -------- - -----SFF  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. FKPPRQLG A RVPKETAL Site 2525
Xenopus.tropicalis.IME2 -------- - ---TPHLI  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U YTGYPLSP T NINQYSYL Site 2928
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. -------- - PAAAGAQQ  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d -------- - ---TPHLI  
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara -------- - --QQRHCR  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. SASYRKRH H LVGVNKCW Site 2521
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD KQTNPTKP D TTAPTLST Site 2521
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos -------- - -QSPVASS  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen DRGQTNNA A SASASNST Site 2521
Drosophila.melanogaster.GSK3H..Putative.glycogen.s DEASESDD D DFEEEDEN Site 2744
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD PEKKAENQ R KTSTITLS Site 2520
Encephalitozoon.cuniculi.CDK1 -------- - -----IME  
Saccharomyces.kluyveri.IME2 TVQEQHHS F THVNGLTF Site 2770
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci -------- - ------RK  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a KELIFEET A RFQPGYRS Site 2521
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LASYQKGH H PAQFSKCW Site 2521
Cryptococcus.neoformans.IME2 ANYAFEGR N KQSQPPQQ Site 2827
Homo.sapiens.HIPK4..Homeodomain.interacting.protei GPPRGATS F LQHVTGHH Site 2785
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote -------- - -------S  
Candida.lusitaniae.IME2 YDESFANS S FDSHKIAC Site 2707
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom YTGYPLSP T KISQYSYL Site 2928
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQMMFNNQ Q QGGFQQRY Site 2726
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ESVVDPSL I QKHAMSCS Site 2521
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. EMKKHNKY K FDHHLPNI Site 2520
Gallus.gallus.CDK2 -------- - --VPHLRL  
Emericella.nidulans.CDK1 ----SYYS G RARRNGFH Site 2520
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. PAPQQCRL P TIVRKGGR Site 2694
Homo.sapiens.CDK1 -------- - ----IKKM  
Candida.albicans.CDK1 NNYNEDNI G IDKHQNMQ Site 2521
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca -------- - PTAAGAQP  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a QMDSPMLL S DLPDLQEP Site 2805
Mus.musculus.ICK..Serine.threonine.protein.kinase. QPVHGRID W SSKYPSRR Site 2806
Saccharomyces.castelli.IME2 NNCSLMNP N SFFGNLTF Site 2785
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec -------- - -----TRK  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep KRAEALEQ G ILPKKLIF Site 2520
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. AFGKNNSY G KSLSNSKH Site 2521
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly RARLVPEW Y RGEGAGAA Site 2522
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS SSSEADLL D KDVLLISE Site 2521
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli RKRDSIEQ G TLKKKLVF Site 2520
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho QSRNPATT N QTEFERVF Site 2520
Homo.sapiens.HIPK2..Homeodomain.interacting.protei YTGYPLSP A KVNQYPYI Site 2928
Acyrthosiphon.pisum.CDK1 -------- - -ASLPETP  
Candida.tropicalis.CDK1 KRSFTTFS M ESEEIANL Site 2727
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQMMFN Q QQNFQRFN Site 2680
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TSSSLHKP G HNSSELNH Site 2522
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR -------- - QGPISTTE  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de SMPDSGRP A FRVVDTEF Site 2521
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 -------- - ETSRMRSQ  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d SYPETGHG K NRRQSMLF Site 2521
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA FSPIARKD S KKRSGMSL Site 2525
Candida.albicans.SSN3..Serine.threonine.protein.ki KRSGIDDL P GGIRKKRG Site 2693
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF VSHRTDKY V SPYGQQRR Site 2737
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA PSTSATAS S ATGGSSSK Site 2521
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara VPFPRRDS K RRNTLTMS Site 2521
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de LKSPSFHE N SNVDDTPK Site 2764
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei -------- - AAAAGATQ  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U YAGFPMSP T KLSQYPYM Site 2928
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d TTNQGASA A GPGFSLKF Site 2523
Candida.dubliniensis.IME2 KRSFTTFS L DSEEVVNL Site 2726
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DTDSSLDA S TGPLEGCR Site 2521
Aspergillus.niger.IME2 WAKPAPAK F LTGSATYR Site 2798
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge EVTCFVPP P LDSEEMES Site 2521
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d DGHCEGKN L KRNRFFFW Site 2787
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. AFGKNNSY G KSLSNSKH Site 2521
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein -------- - PAATGAQQ  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty -------- - -DYPNNKL  
Schizosaccharomyces.japonicus.IME2 ELSLASTL R IPKSAHGA Site 2782
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. HIFRELTD Y ARTHDIYS Site 2521
Gallus.gallus.CDK1 -------- - ----IKKF  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep -------- - -------P  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P IDNFTPMP K QEMMAKLD Site 2522
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -VSVKPRV L RQLRFNNL Site 2522
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. GTGEVSTT S GDVAGPSA Site 2521
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. FKPPRQLG A RVSKETPL Site 2525
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ -------- - -------E  
Kluyveromyces.waltii.IME2 VQENHDHS F SHTNSITF Site 2759
Debaryomyces.hansenii.SKY1 -PVGGSGE D IPGWSKEV Site 2521
Saccharomyces.cerevisiae.IME2 FEPHLSNS N QHFGNVTF Site 2743
Schizosaccharomyces.japonicus.b.IME2 SNASRSPS F RDAIAPSI Site 2817
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un DSHRPSGQ K GVDEGSAG Site 2518
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein -------- - SSGLTTAR  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a SPQIPHQT Y SSILKHLN Site 2839
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep LNSHLPSN Q STSELNTA Site 2521
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST AIEERLKH F VSAPSSSL Site 2521
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk ELTSFEPL V ADSKETSV Site 2521
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de GDCEGKNL K RNRFFFSR Site 2794
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act KNGVIRGQ P ASLAQVQQ Site 2521
Candida.albicans.IME2 KRSFTTFS L DSEEVVNL Site 2726
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d SKQEHFTH I CTATDEVK Site 2521
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -RDPLLMP T WPSSHKKT Site 2520
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. EVISFVPP P LDQEEMES Site 2521
Kluyveromyces.lactis.IME2 IQTSNSHN H TFQDGLSF Site 2793
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina QMDSPMLL A DLPDLQDP Site 2805
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DTDSSLEA S AGPLGCCR Site 2521
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. FKPPEPPK P PGSLEIEQ Site 2525
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 QLDKDKEK Q NGKPLIAD Site 2522
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. FKPLEPSQ L PGTHEIEQ Site 2525
Amphimedon.queenslandica.CDK1 -------- - --------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d RNEGRNRR R QQVLPLKS Site 2521
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U -------- - --LRRDYR  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME GITQRQLA M GPGFSLKF Site 2695
Neurospora.crassa.IME2 DWAASASA S IWAAGSRI Site 2811
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME -------- - -----SGH  
Dictyostelium.discoideum.DYRK2..Probable.serine.th -------- - -TAPSTPS  
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep -------- - -----DAE  
Hydra.magnipapillata.CDK1 -------- - ------NM  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar AASTSTGT E TQAKRAKP Site 2521
Ashbya.gossypii.IME2 VRHEPTPN H SFEDGLSF Site 2800
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi GQDSSSSK T FDKKRERK Site 2521
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos -------- - -VLPKLIS  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p SPDELSSV K KKLYPKSK Site 2521
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RTLRAHTS R GPASPPSV Site 2769
Schizosaccharomyces.pombe.b.IME2 NDHAKFET S KSLHLSSP Site 2754
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a KELIFEET A RFQPGYRS Site 2520
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom YTGFPLSP T KLSQYPYM Site 2928
Schizosaccharomyces.pombe.CDK1 -------- - -------H  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch -------- - -----ISR  
Saccoglossus.kowalevskii.CDK1 -------- - --PEHLPK  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas QIPGRVAS S GLQSVVHR Site 2521
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac KNGVIRGQ P SPLAQVQQ Site 2668
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep -------- - --AGRSSR  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable PPAGQEAP L QGEPLFRP Site 2786
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep -------- - --LQRFRH  
Yarrowia.lipolytica.IME2 DRKIGAGA I SSNNIEVE Site 2797
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil VSGNNASD E PSRKKNRR Site 2521
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli -------- - --VPPLRL  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K LLDRDQRR E DHFTGVVE Site 2521
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly IDNFTPMN K SEMMAKLD Site 2522
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk VKLDDFVP I PIHRARID Site 2520
Species Residue at Site 4915
in 'msaprobs'
muscle

The residue for every species at site 4915 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro -------- - -DYPNNKL  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo STVAQPSE M PPSPLVWE Site 2520
Scheffersomyces.stipitis.SKY1 -PVGGSGE D IPGWSKEL Site 2521
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep -------- - -------P  

Generated by PhyloBot at 02:15, October 16th 2019
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