cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4913 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4913 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4913 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4913 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 TLGVPGLTLK S DSHVTSETIS Site 2826
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ------PFLN  
Danio.rerio.CDK1 ---------- - ----VPPLRL  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge EEQMKELIYR E ALAFNPEYQQ Site 2518
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ---------P  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----NSRTLL  
Candida.guilliermondii.IME2 ASSEGTFSFS G SCVSLAQLMG Site 2519
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RDEPLHRSLE L LSLGGGGKRK Site 2722
Chlamydomonas.reinhardtii.LF4 NSKYISPYSL R QLAGQNAGQG Site 2815
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g SLDVDINNFE P IVVKQADADS Site 2519
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ILLEQLDKDK E KQNGKPLIAD Site 2520
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 AAQDRNSNKS S KGFFSKLGCC Site 2727
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SMGYSATSQQ P PQYSHQTHRY Site 2688
Schizosaccharomyces.octosporus.b.IME2 VYNPSSPVRI N RSTSEGFSKG Site 2796
Candida.albicans.MAPK3..Extracellular.signal.regul KDQLTIEDLK K LLYEEIMKPL Site 2518
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - --ESSRMRTQ  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 VLNAGIGGKD I SLFSNSRNRR Site 2519
Suberites.domuncula.JNK..Stress.activated.protein. QSIPLDQWKT R IYEEVKTYNS Site 2520
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - -------PSR  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - --------HT  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - -------ISR  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---NVLPPIV  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei GSTIYTGYPL S PTKISQYSYL Site 2926
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar ALDSKKYFCK T RKSNYHFPNI Site 2519
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - -------FNN  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - --SSGLTAAR  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM LKSLIFEETL K FKERQPDNAP Site 2516
Strongylocentrotus.purpuratus.CDK1 ---------- - ----PPRLPT  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca AQGSIDPHTR G SYSPGPSNRT Site 2519
Drosophila.melanogaster.CDK1 ---------- - ------LVRN  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 SQPFSMGLQS Q NMMNSYYQNR Site 2732
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. YRQNKVVVPQ S SSTTTKPPAK Site 2699
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH -----DAENV D DQMNNLHIKG Site 2519
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d GYRGLAFQQP G RGKNRRQSIF Site 2520
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. VQNNFHWYTT V LIGTQHYSHI Site 2521
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET TLASDTDSSL E TSAGPLGCCR Site 2519
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 VSGPPLSDDS G ADLPQMEHQH Site 2757
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U TLASDTDSSL E TSAGPLGCCR Site 2519
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. EIVNFSPIAR K DSRRRSGMKL Site 2523
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo SFISSTVAQP S EMPPSPLVWE Site 2518
Bombus.terrestris.CDK1 ---------- - ----PLPKKT  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ---------S  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar NTSLASQQKT T NNGTRGGPRR Site 2771
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. TLPSDTDSSL E TSAGTLGCCR Site 2519
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d KLYRGPTRVP P RGGRGRGVPY Site 2825
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. DIKPHLKHYH L PTINRKGGEY Site 2693
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. QFTPDEVEAM T EAQREYLLKK Site 2518
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G RFLPSEIEVM S EAQKAKLVRK Site 2518
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ILLEQLDKDK E KQNGKPLIAD Site 2520
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 HYESVVKGID N LQVSDEHHPH Site 2707
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QVAASKHAAH F APTNIWYGAE Site 2925
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - --ETSRMRSQ  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl SFISSTVAQP S EMPPSPLVWE Site 2518
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ALDNKKYYCD T KKLNYRFPNI Site 2519
Homo.sapiens.HIPK3..Homeodomain.interacting.protei ASPAYTGFPL S PTKLSQYPYM Site 2926
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O FHLTTTNQGA S AAGPGFSLKF Site 2521
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d GFTRAARTRM P NLNDLKETAL Site 2917
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - -------ISR  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O FHLTTTNQGA S AAGPGFSLKF Site 2521
Naegleria.gruberi.LF4 NSNKNEPIEK Q QKKYSLHYMI Site 2744
Saccharomyces.bayanus.IME2 SQEKFETHLS N QNQHFGNVTF Site 2741
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - --SSGLTAAR  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a FTEILTFQPA P AVAESKETAL Site 2519
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QSQPEPIQVD N VEQTQQAQQV Site 2519
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ---PHNNNNI  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---QSTAASS  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ---VLPKLVS  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RSRSSQPDEV I FLASHEKWKQ Site 2896
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a AYGTVCRSAL G RLPLLPGPRA Site 2753
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific NSGRKLDVSE C VKSSSQTLWK Site 2519
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---NILPPIV  
Aspergillus.nidulans.IME2 YDDGDWMNPA S TKFLTGSTYR Site 2793
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - --------CS  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se KNFASSSVAQ A SELPPSPQAW Site 2518
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. TQPVPSVHGR T DWVAKYGGHR Site 2786
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----VPHLRL  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. TLASDTDSSL E ASAGPLGCCR Site 2519
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. AEILVKLVPE H ARKQCPFLGL Site 2520
Penicillium.marneffei.IME2 YGEQEWASSV A NSILSGSTYR Site 2796
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen FESRDLEIEE W KSKIYIQNRN Site 2519
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a ACIPEHPGDL V QTEAFSKERW Site 2789
Drosophila.melanogaster.MAK KLTAWMVAEN G NLILDNHQQA Site 2790
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ---------K  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ---------I  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de KPYRGAARVL P RGGRGRGVPY Site 2823
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep SKPIPYPPRL P INKKKREFDD Site 2519
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d HHRNKRAAPA A AEGQSKRCRP Site 2519
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin TLASDTDSSL E ASAGPLGCCR Site 2519
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a TLASDTDSSL D ASTGPLEGCR Site 2516
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - --------SI  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - --------SL  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ILLEQLDKDK E KQNGKPLIAD Site 2520
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p VSSKRVLSTS L RSESKRFKGN Site 2519
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen ETPTSSDWQS T DATPTLTNSS Site 2519
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. DWEERSKNGV V KDQPSAQMQQ Site 2518
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - --PAAAGAQQ  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ---------K  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ACISEHPGDL V QTEAFSKERW Site 2789
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d IRSTSMPDSG R PAFRVVDTEF Site 2519
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - --PAAAGAQQ  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein YQGTKRGSQG G DNLHPRKKQK Site 2519
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. DSKRKSGMSI K DEFEGTCPLP Site 2518
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---QSTAASS  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - --SDAKIDGA  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH LFDFTSHELA S HTDLLAKVSL Site 2520
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD TTSSTTNNTT T TTTTTTTSNH Site 2692
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot IGIKRKRDSI E QGTLKKKLVF Site 2519
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str LFAELQNYYR T HDVYGVGQRR Site 2519
Debaryomyces.hansenii.IME2 LEDEFGIIAD I SFGSSHGIKC Site 2756
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati GELDEVPADI V RKLQPAVKTT Site 2518
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin NGTNIVSGSS S SNGPIRKKKR Site 2518
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE DQRMRSRRRT N RAASPNDHIF Site 2522
Caenorhabditis.briggsae.CDK1 ---------- - ------LQLE  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - --QMNPNNQQ  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de DRPLEESLLN P ELIRPFIPEG Site 2519
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ---VLPKLIS  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. CKENLDSHMS S SQNSSEVNAS Site 2519
Monosiga.brevicollis.CDK1 ---------- - ------RIAG  
Saccharomyces.cerevisiae.SKY1 -----SDIPG W FEEVRDHKRH Site 2517
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP EELTMLDLKE L LYEEIIKPLQ Site 2519
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U QHLELCNGAQ S GPYHSIKPSA Site 2519
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AATATGAIGA T NAGGANVTDS Site 2739
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas MLENKNRFDQ T ADQEGRVKQN Site 2519
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. AYGTVCHSAL G HLPLLEGHHV Site 2756
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d GAGSPLSDDS E ADLPRMEHQH Site 2764
Dictyostelium.discoideum.CDK10..Probable.cyclin.de QTNQNNKTSQ N NNMDSYKYSK Site 2519
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d RAQVNQAALL T YHENAALTGK Site 2926
Ajellomyces.capsulatus.CDK1 --------SA Y SGRERLQPYP Site 2519
Dictystelium.discoideum.MAPK3..Extracellular.signa NLLQQQKQQI H QQVNQQSIKN Site 2522
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep CKENLDSHLP P SQNTSELNTA Site 2519
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep NKRATPATSL G TESQSRRGRP Site 2519
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac TLASDTDSSL E AAAGPLGCCR Site 2519
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ISNFSPIARK D SRRRSGMKLQ Site 2519
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ---------L  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri FKTFIRSTAW H SSKVSKKEER Site 2518
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha TLASDTDSSL E ASAGPLGCCR Site 2519
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 AGKNNSISTV S FDSEDILNLH Site 2732
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen QTYEEMISFE P PVFDVDEMES Site 2519
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - -------ISR  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar SGSSNARQEP Q PKSRPTLQIP Site 2862
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. EESELQGLSS N DIYRLTGKLI Site 2518
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D YDHMRPTEDD I QEADSLPESN Site 2891
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - --------KK  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U TSTVYTGYPL T PPKVNQYPYI Site 2812
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d ALDNKKYHCS T KRFNYHFPNI Site 2519
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen AQTGQDWQPS D ATTATLASSS Site 2519
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ------LELF  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - -------NPE  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro SNFRPASGNI V QPAARKKARI Site 2519
Salmo.salar.CDK1 ---------- - ----MPHLRL  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d GIKRKRTEGM D QKDIAKKLSF Site 2515
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d DRPLEESLLN P ELIRPFILEG Site 2519
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi SGGESHNSSS S KTFEKKRGKK Site 2519
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TNAGDRGQTN N AASASASNST Site 2519
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable KPGLPPGGSP Q LGCTTSGGLE Site 2769
Aspergillus.fumigatus.IME2 RQWPTPPYEE R DWMNTTSSNF Site 2785
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SMGYSSTSQQ P PQYSHQTHRY Site 2688
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - -------GNK  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EILSFSPIAQ K DSKKRSGMSL Site 2523
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S KNFASSSVAQ A SELPPSPQAW Site 2518
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ASTVYTGYPL S PAKVNQYPYI Site 2926
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina RLKELIFQET A RFQPGVLEAP Site 2519
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d FRNSSYPETG H GKNRRQSMLF Site 2519
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. HHRNKRAAPA T SEGQSKRCKP Site 2519
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de AVENRRNYNN L RKFNYHLPNI Site 2519
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S KELIYEEVMD Y EAHNTNNRTR Site 2517
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. LVPFSLSPLL P FASPPLPAPL Site 2522
Candida.glabrata.IME2 KASTYEFAFS N PCHAIGNITF Site 2778
Homo.sapiens.MAK..Serine.threonine.protein.kinase. AQPIPSVHGR T DWVAKYGGHR Site 2786
Schizosaccharomyces.pombe.IME2 TLPDSKIIDR S KTHVSTQLLP Site 2814
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P KDELSIDDLK K MLYEEIMKPL Site 2518
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ---------H  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom HPHPHGPPRT T SFLQHVGGHH Site 2782
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. QQAQTPTGKQ T DKTKSNMKGF Site 2519
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d GYRGLAFQHP G RGKSRRQSIF Site 2520
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d SPTPDGRKQV V QLKFDHLPNI Site 2518
Branchiostoma.floridae.CDK1 ---------- - ----VPNLKG  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - -------ISR  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH DALPVKLDDF V PIPIHRARID Site 2518
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD QKQKWSKAGT Q KQSQTKLPKL Site 2686
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR LEMDGPNEVS A TGGDMAGPSA Site 2519
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PPAAQPVHGR T DWASKYASRR Site 2804
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - -------PSR  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---QSPVASS  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----VPHLRL  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act QREIQMDSPM L LADLPDLQEP Site 2803
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. LTYDEVISFV P PPLDQEEMES Site 2519
Lachancea.thermotolerans.SKY1 -----ADIPG W SQEVTGHPRH Site 2517
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a AMKSSPQIPH K TYSSILKHLN Site 2837
Dictyostelium.discoideum.CDK1 ---------- - -------SFF  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. EVLSFKPPRQ L GARVPKETAL Site 2523
Xenopus.tropicalis.IME2 ---------- - -----TPHLI  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U GSAIYTGYPL S PTNINQYSYL Site 2926
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - --PAAAGAQQ  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - -----TPHLI  
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----QQRHCR  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. MCDLSASYRK R HHLVGVNKCW Site 2519
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD EERKKQTNPT K PDTTAPTLST Site 2519
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---QSPVASS  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ANTGDRGQTN N AASASASNST Site 2519
Drosophila.melanogaster.GSK3H..Putative.glycogen.s SDDMDEASES D DDDFEEEDEN Site 2742
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD DRKKPEKKAE N QRKTSTITLS Site 2518
Encephalitozoon.cuniculi.CDK1 ---------- - -------IME  
Saccharomyces.kluyveri.IME2 STNTTVQEQH H SFTHVNGLTF Site 2768
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - --------RK  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a KEKLKELIFE E TARFQPGYRS Site 2519
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. MCDLLASYQK G HHPAQFSKCW Site 2519
Cryptococcus.neoformans.IME2 FSDIANYAFE G RNKQSQPPQQ Site 2825
Homo.sapiens.HIPK4..Homeodomain.interacting.protei SHQHGPPRGA T SFLQHVTGHH Site 2783
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ---------S  
Candida.lusitaniae.IME2 NVDHYDESFA N SSFDSHKIAC Site 2705
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom GSTIYTGYPL S PTKISQYSYL Site 2926
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQQQMMFN N QQQGGFQQRY Site 2724
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep RPLHESVVDP S LIQKHAMSCS Site 2519
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. SPAPEMKKHN K YKFDHHLPNI Site 2518
Gallus.gallus.CDK2 ---------- - ----VPHLRL  
Emericella.nidulans.CDK1 --------SY Y SGRARRNGFH Site 2518
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. KDLKPAPQQC R LPTIVRKGGR Site 2692
Homo.sapiens.CDK1 ---------- - ------IKKM  
Candida.albicans.CDK1 -RDHNNYNED N IGIDKHQNMQ Site 2519
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - --PTAAGAQP  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a QREIQMDSPM L LSDLPDLQEP Site 2803
Mus.musculus.ICK..Serine.threonine.protein.kinase. PPAAQPVHGR I DWSSKYPSRR Site 2804
Saccharomyces.castelli.IME2 EEVTNNCSLM N PNSFFGNLTF Site 2783
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - -------TRK  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ATKRKRAEAL E QGILPKKLIF Site 2518
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. ESMRAFGKNN S YGKSLSNSKH Site 2519
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly TPEMRARLVP E WYRGEGAGAA Site 2520
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS DDVVSSSEAD L LDKDVLLISE Site 2519
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli IGIKRKRDSI E QGTLKKKLVF Site 2518
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho QSTNQSRNPA T TNQTEFERVF Site 2518
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ASTVYTGYPL S PAKVNQYPYI Site 2926
Acyrthosiphon.pisum.CDK1 ---------- - ---ASLPETP  
Candida.tropicalis.CDK1 VGGTKRSFTT F SMESEEIANL Site 2725
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQMM F NQQQNFQRFN Site 2678
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G GAGGTSSSLH K PGHNSSELNH Site 2520
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - --QGPISTTE  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LRSSSMPDSG R PAFRVVDTEF Site 2519
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - --ETSRMRSQ  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d FRNSSYPETG H GKNRRQSMLF Site 2519
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EILSFSPIAR K DSKKRSGMSL Site 2523
Candida.albicans.SSN3..Serine.threonine.protein.ki NSTYKRSGID D LPGGIRKKRG Site 2691
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF QKAPVSHRTD K YVSPYGQQRR Site 2735
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA DTPEPSTSAT A SSATGGSSSK Site 2519
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara VRSFVPFPRR D SKRRNTLTMS Site 2519
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de STSDLKSPSF H ENSNVDDTPK Site 2762
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - --AAAAGATQ  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U ASPAYAGFPM S PTKLSQYPYM Site 2926
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d FHLTTTNQGA S AAGPGFSLKF Site 2521
Candida.dubliniensis.IME2 AAGTKRSFTT F SLDSEEVVNL Site 2724
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a TLASDTDSSL D ASTGPLEGCR Site 2519
Aspergillus.niger.IME2 EDGDWAKPAP A KFLTGSATYR Site 2796
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge LTYEEVTCFV P PPLDSEEMES Site 2519
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d QEGGDGHCEG K NLKRNRFFFW Site 2785
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. ESMRAFGKNN S YGKSLSNSKH Site 2519
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - --PAATGAQQ  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ---DYPNNKL  
Schizosaccharomyces.japonicus.IME2 DSFDELSLAS T LRIPKSAHGA Site 2780
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. SWREHIFREL T DYARTHDIYS Site 2519
Gallus.gallus.CDK1 ---------- - ------IKKF  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ---------P  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RGLDIDNFTP M PKQEMMAKLD Site 2520
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE -----VSVKP R VLRQLRFNNL Site 2520
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. DGPMGTGEVS T TSGDVAGPSA Site 2519
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. EVLSFKPPRQ L GARVSKETPL Site 2523
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ---------E  
Kluyveromyces.waltii.IME2 CSTSVQENHD H SFSHTNSITF Site 2757
Debaryomyces.hansenii.SKY1 -----PVGGS G EDIPGWSKEV Site 2519
Saccharomyces.cerevisiae.IME2 SREKFEPHLS N SNQHFGNVTF Site 2741
Schizosaccharomyces.japonicus.b.IME2 ARIQSNASRS P SFRDAIAPSI Site 2815
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un KDSVDSHRPS G QKGVDEGSAG Site 2516
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - --SSGLTTAR  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a AMKSSPQIPH Q TYSSILKHLN Site 2837
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep YKDNLNSHLP S NQSTSELNTA Site 2519
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST VERPAIEERL K HFVSAPSSSL Site 2519
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk LTHEELTSFE P LVADSKETSV Site 2519
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de EGGDGDCEGK N LKRNRFFFSR Site 2792
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EERTKNGVIR G QPASLAQVQQ Site 2519
Candida.albicans.IME2 VAGTKRSFTT F SLDSEEVVNL Site 2724
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --ACSKQEHF T HICTATDEVK Site 2519
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k -----RDPLL M PTWPSSHKKT Site 2518
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. LTYDEVISFV P PPLDQEEMES Site 2519
Kluyveromyces.lactis.IME2 SQNLIQTSNS H NHTFQDGLSF Site 2791
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina QREIQMDSPM L LADLPDLQDP Site 2803
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. TLASDTDSSL E ASAGPLGCCR Site 2519
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. EVLSFKPPEP P KPPGSLEIEQ Site 2523
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ILLEQLDKDK E KQNGKPLIAD Site 2520
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. EVLSFKPLEP S QLPGTHEIEQ Site 2523
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d KRKARNEGRN R RRQQVLPLKS Site 2519
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----LRRDYR  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME VLNAGITQRQ L AMGPGFSLKF Site 2693
Neurospora.crassa.IME2 NDEGDWAASA S ASIWAAGSRI Site 2809
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - -------SGH  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ---TAPSTPS  
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - -------DAE  
Hydra.magnipapillata.CDK1 ---------- - --------NM  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar RNKRAASTST G TETQAKRAKP Site 2519
Ashbya.gossypii.IME2 PPAQVRHEPT P NHSFEDGLSF Site 2798
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi NCGEGQDSSS S KTFDKKRERK Site 2519
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ---VLPKLIS  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LGHLSPDELS S VKKKLYPKSK Site 2519
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace TLKGRTLRAH T SRGPASPPSV Site 2767
Schizosaccharomyces.pombe.b.IME2 QNICNDHAKF E TSKSLHLSSP Site 2752
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a KEKLKELIFE E TARFQPGYRS Site 2518
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom ASPAYTGFPL S PTKLSQYPYM Site 2926
Schizosaccharomyces.pombe.CDK1 ---------- - ---------H  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - -------ISR  
Saccoglossus.kowalevskii.CDK1 ---------- - ----PEHLPK  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas MSTSQIPGRV A SSGLQSVVHR Site 2519
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EERTKNGVIR G QPSPLAQVQQ Site 2528
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----AGRSSR  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable DQLEPPAGQE A PLQGEPLFRP Site 2784
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----LQRFRH  
Yarrowia.lipolytica.IME2 NSFRDRKIGA G AISSNNIEVE Site 2795
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil AAAAVSGNNA S DEPSRKKNRR Site 2519
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----VPPLRL  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --EDLLDRDQ R REDHFTGVVE Site 2519
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly KGLDIDNFTP M NKSEMMAKLD Site 2520
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk DALPVKLDDF V PIPIHRARID Site 2518
Species Residue at Site 4913
in 'msaprobs'
muscle

The residue for every species at site 4913 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ---DYPNNKL  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo SFISSTVAQP S EMPPSPLVWE Site 2518
Scheffersomyces.stipitis.SKY1 -----PVGGS G EDIPGWSKEL Site 2519
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ---------P  

Generated by PhyloBot at 15:41, December 15th 2019
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