cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4909 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4909 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4909 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4909 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 SLADTLGVPG L TLKSDSHVTS Site 2822
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - --------VP  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge HALTEEQMKE L IYREALAFNP Site 2514
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - --------NS  
Candida.guilliermondii.IME2 QLKGASSEGT F SFSGSCVSLA Site 2515
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ARGARDEPLH R SLELLSLGGG Site 2718
Chlamydomonas.reinhardtii.LF4 VGKTNSKYIS P YSLRQLAGQN Site 2811
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g HVYESLDVDI N NFEPIVVKQA Site 2515
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 PNPAILLEQL D KDKEKQNGKP Site 2516
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NAKNAAQDRN S NKSSKGFFSK Site 2723
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho QPQSSMGYSA T SQQPPQYSHQ Site 2684
Schizosaccharomyces.octosporus.b.IME2 PNFMVYNPSS P VRINRSTSEG Site 2792
Candida.albicans.MAPK3..Extracellular.signal.regul FDKMKDQLTI E DLKKLLYEEI Site 2514
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ------ESSR  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 NASHVLNAGI G GKDISLFSNS Site 2515
Suberites.domuncula.JNK..Stress.activated.protein. ALDEQSIPLD Q WKTRIYEEVK Site 2516
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - -------NVL  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei GSSRGSTIYT G YPLSPTKISQ Site 2922
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar NVLPALDSKK Y FCKTRKSNYH Site 2515
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ------SSGL  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM SRDALKSLIF E ETLKFKERQP Site 2512
Strongylocentrotus.purpuratus.CDK1 ---------- - --------PP  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca THSKAQGSID P HTRGSYSPGP Site 2515
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 SQMLSQPFSM G LQSQNMMNSY Site 2728
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. QTTFYRQNKV V VPQSSSTTTK Site 2695
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------D A ENVDDQMNNL Site 2515
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d QKDPGYRGLA F QQPGRGKNRR Site 2516
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. QFSLVQNNFH W YTTVLIGTQH Site 2517
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET STDQTLASDT D SSLETSAGPL Site 2515
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 VTTLVSGPPL S DDSGADLPQM Site 2753
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U STDQTLASDT D SSLETSAGPL Site 2515
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. HIYKEIVNFS P IARKDSRRRS Site 2519
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo AAFKSFISST V AQPSEMPPSP Site 2514
Bombus.terrestris.CDK1 ---------- - --------PL  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar IDLHNTSLAS Q QKTTNNGTRG Site 2767
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. STDPTLPSDT D SSLETSAGTL Site 2515
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SAYGKLYRGP T RVPPRGGRGR Site 2821
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. DTQKDIKPHL K HYHLPTINRK Site 2689
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. AHLYQFTPDE V EAMTEAQREY Site 2514
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G EDLFRFLPSE I EVMSEAQKAK Site 2514
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 PNPAILLEQL D KDKEKQNGKP Site 2516
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 STRRHYESVV K GIDNLQVSDE Site 2703
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO LSPAQVAASK H AAHFAPTNIW Site 2921
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ------ETSR  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl AAFKSFISST V AQPSEMPPSP Site 2514
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 SILPALDNKK Y YCDTKKLNYR Site 2515
Homo.sapiens.HIPK3..Homeodomain.interacting.protei SYIAASPAYT G FPLSPTKLSQ Site 2922
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O KETGFHLTTT N QGASAAGPGF Site 2517
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d QNGIGFTRAA R TRMPNLNDLK Site 2913
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O KETGFHLTTT N QGASAAGPGF Site 2517
Naegleria.gruberi.LF4 ASLSNSNKNE P IEKQQKKYSL Site 2740
Saccharomyces.bayanus.IME2 TLEKSQEKFE T HLSNQNQHFG Site 2737
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ------SSGL  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a KRLTFTEILT F QPAPAVAESK Site 2515
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQIQSQPEP I QVDNVEQTQQ Site 2515
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - -------PHN  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - -------QST  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - -------VLP  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d WKHSRSRSSQ P DEVIFLASHE Site 2892
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a GYSQAYGTVC R SALGRLPLLP Site 2749
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific AMMCNSGRKL D VSECVKSSSQ Site 2515
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - -------NIL  
Aspergillus.nidulans.IME2 PTPPYDDGDW M NPASTKFLTG Site 2789
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se SAAYKNFASS S VAQASELPPS Site 2514
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. IVNRTQPVPS V HGRTDWVAKY Site 2782
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - --------VP  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. STDQTLASDT D SSLEASAGPL Site 2515
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. KGVPAEILVK L VPEHARKQCP Site 2516
Penicillium.marneffei.IME2 PTPPYGEQEW A SSVANSILSG Site 2792
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen YDQSFESRDL E IEEWKSKIYI Site 2515
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DLNGACIPEH P GDLVQTEAFS Site 2785
Drosophila.melanogaster.MAK TEDEKLTAWM V AENGNLILDN Site 2786
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de QSYGKPYRGA A RVLPRGGRGR Site 2819
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep PNAFSKPIPY P PRLPINKKKR Site 2515
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d PTFPHHRNKR A APAAAEGQSK Site 2515
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin STDQTLASDT D SSLEASAGPL Site 2515
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a STEQTLASDT D SSLDASTGPL Site 2512
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 PNPAILLEQL D KDKEKQNGKP Site 2516
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p DDSEVSSKRV L STSLRSESKR Site 2515
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen QALTETPTSS D WQSTDATPTL Site 2515
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. KEVMDWEERS K NGVVKDQPSA Site 2514
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ------PAAA  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a DLNGACISEH P GDLVQTEAFS Site 2785
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d KEANIRSTSM P DSGRPAFRVV Site 2515
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ------PAAA  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein KTMTYQGTKR G SQGGDNLHPR Site 2515
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. ILRKDSKRKS G MSIKDEFEGT Site 2514
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - -------QST  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ------SDAK  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ALPPLFDFTS H ELASHTDLLA Site 2516
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD STTNTTSSTT N NTTTTTTTTT Site 2688
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ENLLIGIKRK R DSIEQGTLKK Site 2515
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str WRAMLFAELQ N YYRTHDVYGV Site 2515
Debaryomyces.hansenii.IME2 LKEPLEDEFG I IADISFGSSH Site 2752
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati NWLPGELDEV P ADIVRKLQPA Site 2514
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AVQVNGTNIV S GSSSSNGPIR Site 2514
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE KEEIDQRMRS R RRTNRAASPN Site 2518
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ------QMNP  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de DFHVDRPLEE S LLNPELIRPF Site 2515
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - -------VLP  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ----CKENLD S HMSSSQNSSE Site 2515
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------S D IPGWFEEVRD Site 2513
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP DRRKEELTML D LKELLYEEII Site 2515
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U KRFSQHLELC N GAQSGPYHSI Site 2515
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AATAAATATG A IGATNAGGAN Site 2735
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas DKKKMLENKN R FDQTADQEGR Site 2085
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GYSQAYGTVC H SALGHLPLLE Site 2752
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d ASHQGAGSPL S DDSEADLPRM Site 2760
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NQNNQTNQNN K TSQNNNMDSY Site 2515
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d ALIHRAQVNQ A ALLTYHENAA Site 2922
Ajellomyces.capsulatus.CDK1 ---------- - -SAYSGRERL  
Dictystelium.discoideum.MAPK3..Extracellular.signa SELFNLLQQQ K QQIHQQVNQQ Site 2518
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ----CKENLD S HLPPSQNTSE Site 2515
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep PHHRNKRATP A TSLGTESQSR Site 2515
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac STDPTLASDT D SSLEAAAGPL Site 2515
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. IYKEISNFSP I ARKDSRRRSG Site 2515
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri HSAAFKTFIR S TAWHSSKVSK Site 2514
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha STDQTLASDT D SSLEASAGPL Site 2515
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 AQSPAGKNNS I STVSFDSEDI Site 2728
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen EWKRQTYEEM I SFEPPVFDVD Site 2515
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar QSSSSGSSNA R QEPQPKSRPT Site 2858
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. LLHFEESELQ G LSSNDIYRLT Site 2514
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D HHAPYDHMRP T EDDIQEADSL Site 2887
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U PASPTSTVYT G YPLTPPKVNQ Site 2808
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d RILPALDNKK Y HCSTKRFNYH Site 2515
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ALTEAQTGQD W QPSDATTATL Site 2515
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro LPSSSNFRPA S GNIVQPAARK Site 2515
Salmo.salar.CDK1 ---------- - --------MP  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d NLNLGIKRKR T EGMDQKDIAK Site 2511
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d DFHVDRPLEE S LLNPELIRPF Site 2515
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi YEHYSGGESH N SSSSKTFEKK Site 2515
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen AASDTNAGDR G QTNNAASASA Site 2515
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SAFSKPGLPP G GSPQLGCTTS Site 2765
Aspergillus.fumigatus.IME2 ASSNRQWPTP P YEERDWMNTT Site 2781
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan LPQSSMGYSS T SQQPPQYSHQ Site 2684
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha HIYKEILSFS P IAQKDSKKRS Site 2519
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S SAAYKNFASS S VAQASELPPS Site 2514
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma SASPASTVYT G YPLSPAKVNQ Site 2922
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina LPKERLKELI F QETARFQPGV Site 2515
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d KDPGFRNSSY P ETGHGKNRRQ Site 2515
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. PTFPHHRNKR A APATSEGQSK Site 2515
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de TVFPAVENRR N YNNLRKFNYH Site 2515
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S VEQWKELIYE E VMDYEAHNTN Site 2513
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. NDFSLVPFSL S PLLPFASPPL Site 2518
Candida.glabrata.IME2 TNEAKASTYE F AFSNPCHAIG Site 2774
Homo.sapiens.MAK..Serine.threonine.protein.kinase. IVNRAQPIPS V HGRTDWVAKY Site 2782
Schizosaccharomyces.pombe.IME2 AGSLTLPDSK I IDRSKTHVST Site 2810
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P FDKRKDELSI D DLKKMLYEEI Site 2514
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom LPAHHPHPHG P PRTTSFLQHV Site 2778
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. SGQGQQAQTP T GKQTDKTKSN Site 2515
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d QKDPGYRGLA F QHPGRGKSRR Site 2516
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d GSHISPTPDG R KQVVQLKFDH Site 2514
Branchiostoma.floridae.CDK1 ---------- - --------VP  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH SHARDALPVK L DDFVPIPIHR Site 2514
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD KQRKQKQKWS K AGTQKQSQTK Site 2682
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ALPQLEMDGP N EVSATGGDMA Site 2515
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. LIPRPPAAQP V HGRTDWASKY Site 2800
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - -------QSP  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - --------VP  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act IESLQREIQM D SPMLLADLPD Site 2799
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. EWKSLTYDEV I SFVPPPLDQE Site 2515
Lachancea.thermotolerans.SKY1 ---------A D IPGWSQEVTG Site 2513
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a LTPSAMKSSP Q IPHKTYSSIL Site 2833
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. VTYKEVLSFK P PRQLGARVPK Site 2519
Xenopus.tropicalis.IME2 ---------- - ---------T  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U GASRGSAIYT G YPLSPTNINQ Site 2922
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ------PAAA  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ---------T  
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - --------QQ  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LKPEMCDLSA S YRKRHHLVGV Site 2515
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD KKKKEERKKQ T NPTKPDTTAP Site 2515
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - -------QSP  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen AASDANTGDR G QTNNAASASA Site 2515
Drosophila.melanogaster.GSK3H..Putative.glycogen.s STYISDDMDE A SESDDDDFEE Site 2738
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD QNQTDRKKPE K KAENQRKTST Site 2514
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 DTTTSTNTTV Q EQHHSFTHVN Site 2764
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a DDLPKEKLKE L IFEETARFQP Site 2515
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LKPEMCDLLA S YQKGHHPAQF Site 2515
Cryptococcus.neoformans.IME2 TLPSFSDIAN Y AFEGRNKQSQ Site 2821
Homo.sapiens.HIPK4..Homeodomain.interacting.protei PPRRSHQHGP P RGATSFLQHV Site 2779
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 AFYENVDHYD E SFANSSFDSH Site 2701
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom GSSRGSTIYT G YPLSPTKISQ Site 2922
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQQQQQQQ M MFNNQQQGGF Site 2720
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep FTVDRPLHES V VDPSLIQKHA Site 2515
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. SSNMSPAPEM K KHNKYKFDHH Site 2514
Gallus.gallus.CDK2 ---------- - --------VP  
Emericella.nidulans.CDK1 ---------- - -SYYSGRARR  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. TDPQKDLKPA P QQCRLPTIVR Site 2688
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 -----RDHNN Y NEDNIGIDKH Site 2515
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ------PTAA  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a IESLQREIQM D SPMLLSDLPD Site 2799
Mus.musculus.ICK..Serine.threonine.protein.kinase. LIPRPPAAQP V HGRIDWSSKY Site 2800
Saccharomyces.castelli.IME2 LGPSEEVTNN C SLMNPNSFFG Site 2779
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep NPTVATKRKR A EALEQGILPK Site 2514
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. PEAGESMRAF G KNNSYGKSLS Site 2515
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly LRACTPEMRA R LVPEWYRGEG Site 2516
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS STDEDDVVSS S EADLLDKDVL Site 2515
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ENLLIGIKRK R DSIEQGTLKK Site 2514
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho QITQQSTNQS R NPATTNQTEF Site 2514
Homo.sapiens.HIPK2..Homeodomain.interacting.protei SASPASTVYT G YPLSPAKVNQ Site 2922
Acyrthosiphon.pisum.CDK1 ---------- - -------ASL  
Candida.tropicalis.CDK1 KSNQVGGTKR S FTTFSMESEE Site 2721
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QMMFNQQQNF Site 2674
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G HYSGGAGGTS S SLHKPGHNSS Site 2516
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ------QGPI  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de KEASLRSSSM P DSGRPAFRVV Site 2515
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ------ETSR  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d KDPGFRNSSY P ETGHGKNRRQ Site 2515
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA HIYKEILSFS P IARKDSKKRS Site 2519
Candida.albicans.SSN3..Serine.threonine.protein.ki SHGANSTYKR S GIDDLPGGIR Site 2687
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GVGGQKAPVS H RTDKYVSPYG Site 2731
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TAPHDTPEPS T SATASSATGG Site 2515
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara SFKEVRSFVP F PRRDSKRRNT Site 2515
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de LHQQSTSDLK S PSFHENSNVD Site 2758
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ------AAAA  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SYITASPAYA G FPMSPTKLSQ Site 2922
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d KETGFHLTTT N QGASAAGPGF Site 2517
Candida.dubliniensis.IME2 KQSKAAGTKR S FTTFSLDSEE Site 2720
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a STEHTLASDT D SSLDASTGPL Site 2515
Aspergillus.niger.IME2 TPPYEDGDWA K PAPAKFLTGS Site 2792
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge EWKRLTYEEV T CFVPPPLDSE Site 2515
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d NQEKQEGGDG H CEGKNLKRNR Site 2781
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. PEAGESMRAF G KNNSYGKSLS Site 2515
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ------PAAT  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - -------DYP  
Schizosaccharomyces.japonicus.IME2 EGFHDSFDEL S LASTLRIPKS Site 2776
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. QNVDSWREHI F RELTDYARTH Site 2515
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P VLAARGLDID N FTPMPKQEMM Site 2516
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------V S VKPRVLRQLR Site 2516
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. TLEMDGPMGT G EVSTTSGDVA Site 2515
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. VTYKEVLSFK P PRQLGARVSK Site 2519
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 ISEECSTSVQ E NHDHSFSHTN Site 2753
Debaryomyces.hansenii.SKY1 ---------P V GGSGEDIPGW Site 2515
Saccharomyces.cerevisiae.IME2 TLKKSREKFE P HLSNSNQHFG Site 2737
Schizosaccharomyces.japonicus.b.IME2 PIRNARIQSN A SRSPSFRDAI Site 2811
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ----KDSVDS H RPSGQKGVDE Site 2512
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ------SSGL  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a LTPSAMKSSP Q IPHQTYSSIL Site 2833
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ----YKDNLN S HLPSNQSTSE Site 2515
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST HVPLVERPAI E ERLKHFVSAP Site 2515
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk EWKRLTHEEL T SFEPLVADSK Site 2515
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de QEKQEGGDGD C EGKNLKRNRF Site 2788
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act VLEWEERTKN G VIRGQPASLA Site 2515
Candida.albicans.IME2 KSSKVAGTKR S FTTFSLDSEE Site 2720
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ------ACSK Q EHFTHICTAT Site 2515
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------R D PLLMPTWPSS Site 2243
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. EWKSLTYDEV I SFVPPPLDQE Site 2515
Kluyveromyces.lactis.IME2 SEHASQNLIQ T SNSHNHTFQD Site 2787
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina IESLQREIQM D SPMLLADLPD Site 2799
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. STDQTLASDT D SSLEASAGPL Site 2515
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. LTYQEVLSFK P PEPPKPPGSL Site 2519
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 PNPAILLEQL D KDKEKQNGKP Site 2516
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. LTYQEVLSFK P LEPSQLPGTH Site 2519
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -AQIKRKARN E GRNRRRQQVL Site 2515
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - --------LR  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME STGFVLNAGI T QRQLAMGPGF Site 2689
Neurospora.crassa.IME2 TPPYNDEGDW A ASASASIWAA Site 2805
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - -------TAP  
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar FPHHRNKRAA S TSTGTETQAK Site 2515
Ashbya.gossypii.IME2 HDILPPAQVR H EPTPNHSFED Site 2794
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi YERYNCGEGQ D SSSSKTFDKK Site 2515
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - -------VLP  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ENVELGHLSP D ELSSVKKKLY Site 2515
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RKRTTLKGRT L RAHTSRGPAS Site 2763
Schizosaccharomyces.pombe.b.IME2 PAEVQNICND H AKFETSKSLH Site 2748
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a DDLPKEKLKE L IFEETARFQP Site 2514
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom SYIAASPAYT G FPLSPTKLSQ Site 2922
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - --------PE  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas DTSRMSTSQI P GRVASSGLQS Site 2515
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac VMDLEERTKN G VIRGQPSPLA Site 2524
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - --------AG  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable GLQEDQLEPP A GQEAPLQGEP Site 2780
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - --------LQ  
Yarrowia.lipolytica.IME2 GLQTNSFRDR K IGAGAISSNN Site 2791
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil AAAAAAAAVS G NNASDEPSRK Site 2515
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - --------VP  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ------EDLL D RDQRREDHFT Site 2515
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly VLASKGLDID N FTPMNKSEMM Site 2516
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk SHARDALPVK L DDFVPIPIHR Site 2514
Species Residue at Site 4909
in 'msaprobs'
muscle

The residue for every species at site 4909 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - -------DYP  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo AAFKSFISST V AQPSEMPPSP Site 2514
Scheffersomyces.stipitis.SKY1 ---------P V GGSGEDIPGW Site 2515
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 15:35, October 23rd 2019
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