cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4908 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4908 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4908 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4908 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 TSLADTLGVP G LTLKSDSHVT Site 2821
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ---------V  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge QHALTEEQMK E LIYREALAFN Site 2513
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ---------N  
Candida.guilliermondii.IME2 NQLKGASSEG T FSFSGSCVSL Site 2514
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ VARGARDEPL H RSLELLSLGG Site 2717
Chlamydomonas.reinhardtii.LF4 NVGKTNSKYI S PYSLRQLAGQ Site 2810
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g PHVYESLDVD I NNFEPIVVKQ Site 2514
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 QPNPAILLEQ L DKDKEKQNGK Site 2515
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 QNAKNAAQDR N SNKSSKGFFS Site 2722
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SQPQSSMGYS A TSQQPPQYSH Site 2683
Schizosaccharomyces.octosporus.b.IME2 YPNFMVYNPS S PVRINRSTSE Site 2791
Candida.albicans.MAPK3..Extracellular.signal.regul DFDKMKDQLT I EDLKKLLYEE Site 2513
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - -------ESS  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 PNASHVLNAG I GGKDISLFSN Site 2514
Suberites.domuncula.JNK..Stress.activated.protein. HALDEQSIPL D QWKTRIYEEV Site 2515
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - --------NV  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei IGSSRGSTIY T GYPLSPTKIS Site 2921
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar SNVLPALDSK K YFCKTRKSNY Site 2514
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - -------SSG  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ISRDALKSLI F EETLKFKERQ Site 2511
Strongylocentrotus.purpuratus.CDK1 ---------- - ---------P  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ATHSKAQGSI D PHTRGSYSPG Site 2514
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ASQMLSQPFS M GLQSQNMMNS Site 2727
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. NQTTFYRQNK V VVPQSSSTTT Site 2694
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- D AENVDDQMNN Site 2514
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LQKDPGYRGL A FQQPGRGKNR Site 2515
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. QQFSLVQNNF H WYTTVLIGTQ Site 2516
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET MSTDQTLASD T DSSLETSAGP Site 2514
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 NVTTLVSGPP L SDDSGADLPQ Site 2752
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U MSTDQTLASD T DSSLETSAGP Site 2514
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. QHIYKEIVNF S PIARKDSRRR Site 2518
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo SAAFKSFISS T VAQPSEMPPS Site 2513
Bombus.terrestris.CDK1 ---------- - ---------P  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar AIDLHNTSLA S QQKTTNNGTR Site 2766
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. MSTDPTLPSD T DSSLETSAGT Site 2514
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SSAYGKLYRG P TRVPPRGGRG Site 2820
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. TDTQKDIKPH L KHYHLPTINR Site 2688
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. PAHLYQFTPD E VEAMTEAQRE Site 2513
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G PEDLFRFLPS E IEVMSEAQKA Site 2513
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 QPNPAILLEQ L DKDKEKQNGK Site 2515
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 KSTRRHYESV V KGIDNLQVSD Site 2702
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PLSPAQVAAS K HAAHFAPTNI Site 2920
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - -------ETS  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl SAAFKSFISS T VAQPSEMPPS Site 2513
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 SSILPALDNK K YYCDTKKLNY Site 2514
Homo.sapiens.HIPK3..Homeodomain.interacting.protei HSYIAASPAY T GFPLSPTKLS Site 2921
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O LKETGFHLTT T NQGASAAGPG Site 2516
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d GQNGIGFTRA A RTRMPNLNDL Site 2912
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LKETGFHLTT T NQGASAAGPG Site 2516
Naegleria.gruberi.LF4 HASLSNSNKN E PIEKQQKKYS Site 2739
Saccharomyces.bayanus.IME2 PTLEKSQEKF E THLSNQNQHF Site 2736
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - -------SSG  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a WKRLTFTEIL T FQPAPAVAES Site 2514
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQQIQSQPE P IQVDNVEQTQ Site 2514
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - --------PH  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - --------QS  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - --------VL  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d GWKHSRSRSS Q PDEVIFLASH Site 2891
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a GGYSQAYGTV C RSALGRLPLL Site 2748
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific LAMMCNSGRK L DVSECVKSSS Site 2514
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - --------NI  
Aspergillus.nidulans.IME2 WPTPPYDDGD W MNPASTKFLT Site 2788
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se QSAAYKNFAS S SVAQASELPP Site 2513
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. NIVNRTQPVP S VHGRTDWVAK Site 2781
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ---------V  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. MSTDQTLASD T DSSLEASAGP Site 2514
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. LKGVPAEILV K LVPEHARKQC Site 2515
Penicillium.marneffei.IME2 WPTPPYGEQE W ASSVANSILS Site 2791
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen PYDQSFESRD L EIEEWKSKIY Site 2514
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a GDLNGACIPE H PGDLVQTEAF Site 2784
Drosophila.melanogaster.MAK RTEDEKLTAW M VAENGNLILD Site 2785
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de AQSYGKPYRG A ARVLPRGGRG Site 2818
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep LPNAFSKPIP Y PPRLPINKKK Site 2514
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d MPTFPHHRNK R AAPAAAEGQS Site 2514
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin MSTDQTLASD T DSSLEASAGP Site 2514
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a MSTEQTLASD T DSSLDASTGP Site 2511
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 QPNPAILLEQ L DKDKEKQNGK Site 2515
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p EDDSEVSSKR V LSTSLRSESK Site 2514
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen SQALTETPTS S DWQSTDATPT Site 2514
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. YKEVMDWEER S KNGVVKDQPS Site 2513
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - -------PAA  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a GDLNGACISE H PGDLVQTEAF Site 2784
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d QKEANIRSTS M PDSGRPAFRV Site 2514
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - -------PAA  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein IKTMTYQGTK R GSQGGDNLHP Site 2514
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. PILRKDSKRK S GMSIKDEFEG Site 2513
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - --------QS  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - -------SDA  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH NALPPLFDFT S HELASHTDLL Site 2515
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD PSTTNTTSST T NNTTTTTTTT Site 2687
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot KENLLIGIKR K RDSIEQGTLK Site 2514
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str EWRAMLFAEL Q NYYRTHDVYG Site 2514
Debaryomyces.hansenii.IME2 ALKEPLEDEF G IIADISFGSS Site 2751
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati FNWLPGELDE V PADIVRKLQP Site 2513
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAVQVNGTNI V SGSSSSNGPI Site 2513
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE LKEEIDQRMR S RRRTNRAASP Site 2517
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - -------QMN  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de HDFHVDRPLE E SLLNPELIRP Site 2514
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - --------VL  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -----CKENL D SHMSSSQNSS Site 2514
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- S DIPGWFEEVR Site 2512
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP FDRRKEELTM L DLKELLYEEI Site 2514
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U DKRFSQHLEL C NGAQSGPYHS Site 2514
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GAATAAATAT G AIGATNAGGA Site 2734
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas KDKKKMLENK N RFDQTADQEG Site 2084
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GGYSQAYGTV C HSALGHLPLL Site 2751
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d VASHQGAGSP L SDDSEADLPR Site 2759
Dictyostelium.discoideum.CDK10..Probable.cyclin.de TNQNNQTNQN N KTSQNNNMDS Site 2514
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d EALIHRAQVN Q AALLTYHENA Site 2921
Ajellomyces.capsulatus.CDK1 ---------- - --SAYSGRER  
Dictystelium.discoideum.MAPK3..Extracellular.signa SSELFNLLQQ Q KQQIHQQVNQ Site 2517
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -----CKENL D SHLPPSQNTS Site 2514
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep FPHHRNKRAT P ATSLGTESQS Site 2514
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac MSTDPTLASD T DSSLEAAAGP Site 2514
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. HIYKEISNFS P IARKDSRRRS Site 2514
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri PHSAAFKTFI R STAWHSSKVS Site 2513
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha MSTDQTLASD T DSSLEASAGP Site 2514
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 YAQSPAGKNN S ISTVSFDSED Site 2727
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen EEWKRQTYEE M ISFEPPVFDV Site 2514
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar SQSSSSGSSN A RQEPQPKSRP Site 2857
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. PLLHFEESEL Q GLSSNDIYRL Site 2513
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D NHHAPYDHMR P TEDDIQEADS Site 2886
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U IPASPTSTVY T GYPLTPPKVN Site 2807
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d SRILPALDNK K YHCSTKRFNY Site 2514
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen QALTEAQTGQ D WQPSDATTAT Site 2514
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro RLPSSSNFRP A SGNIVQPAAR Site 2514
Salmo.salar.CDK1 ---------- - ---------M  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d QNLNLGIKRK R TEGMDQKDIA Site 2510
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d HDFHVDRPLE E SLLNPELIRP Site 2514
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi LYEHYSGGES H NSSSSKTFEK Site 2514
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TAASDTNAGD R GQTNNAASAS Site 2514
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SSAFSKPGLP P GGSPQLGCTT Site 2764
Aspergillus.fumigatus.IME2 HASSNRQWPT P PYEERDWMNT Site 2780
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SLPQSSMGYS S TSQQPPQYSH Site 2683
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha KHIYKEILSF S PIAQKDSKKR Site 2518
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S QSAAYKNFAS S SVAQASELPP Site 2513
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma ISASPASTVY T GYPLSPAKVN Site 2921
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina DLPKERLKEL I FQETARFQPG Site 2514
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d QKDPGFRNSS Y PETGHGKNRR Site 2514
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. MPTFPHHRNK R AAPATSEGQS Site 2514
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de STVFPAVENR R NYNNLRKFNY Site 2514
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S TVEQWKELIY E EVMDYEAHNT Site 2512
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. SNDFSLVPFS L SPLLPFASPP Site 2517
Candida.glabrata.IME2 NTNEAKASTY E FAFSNPCHAI Site 2773
Homo.sapiens.MAK..Serine.threonine.protein.kinase. NIVNRAQPIP S VHGRTDWVAK Site 2781
Schizosaccharomyces.pombe.IME2 LAGSLTLPDS K IIDRSKTHVS Site 2809
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P DFDKRKDELS I DDLKKMLYEE Site 2513
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom GLPAHHPHPH G PPRTTSFLQH Site 2777
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. SSGQGQQAQT P TGKQTDKTKS Site 2514
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LQKDPGYRGL A FQHPGRGKSR Site 2515
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d PGSHISPTPD G RKQVVQLKFD Site 2513
Branchiostoma.floridae.CDK1 ---------- - ---------V  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH PSHARDALPV K LDDFVPIPIH Site 2513
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD AKQRKQKQKW S KAGTQKQSQT Site 2681
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR RALPQLEMDG P NEVSATGGDM Site 2514
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. GLIPRPPAAQ P VHGRTDWASK Site 2799
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - --------QS  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ---------V  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act DIESLQREIQ M DSPMLLADLP Site 2798
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. DEWKSLTYDE V ISFVPPPLDQ Site 2514
Lachancea.thermotolerans.SKY1 ---------- A DIPGWSQEVT Site 2512
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a TLTPSAMKSS P QIPHKTYSSI Site 2832
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. RVTYKEVLSF K PPRQLGARVP Site 2518
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U IGASRGSAIY T GYPLSPTNIN Site 2921
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - -------PAA  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ---------Q  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. KLKPEMCDLS A SYRKRHHLVG Site 2514
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD IKKKKEERKK Q TNPTKPDTTA Site 2514
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - --------QS  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TAASDANTGD R GQTNNAASAS Site 2514
Drosophila.melanogaster.GSK3H..Putative.glycogen.s NSTYISDDMD E ASESDDDDFE Site 2737
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD RQNQTDRKKP E KKAENQRKTS Site 2513
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 NDTTTSTNTT V QEQHHSFTHV Site 2763
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a LDDLPKEKLK E LIFEETARFQ Site 2514
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. RLKPEMCDLL A SYQKGHHPAQ Site 2514
Cryptococcus.neoformans.IME2 QTLPSFSDIA N YAFEGRNKQS Site 2820
Homo.sapiens.HIPK4..Homeodomain.interacting.protei LPPRRSHQHG P PRGATSFLQH Site 2778
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 DAFYENVDHY D ESFANSSFDS Site 2700
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom IGSSRGSTIY T GYPLSPTKIS Site 2921
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQQQQQQQQQ Q MMFNNQQQGG Site 2719
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep EFTVDRPLHE S VVDPSLIQKH Site 2514
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. ASSNMSPAPE M KKHNKYKFDH Site 2513
Gallus.gallus.CDK2 ---------- - ---------V  
Emericella.nidulans.CDK1 ---------- - --SYYSGRAR  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. KTDPQKDLKP A PQQCRLPTIV Site 2687
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ------RDHN N YNEDNIGIDK Site 2514
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - -------PTA  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a DIESLQREIQ M DSPMLLSDLP Site 2798
Mus.musculus.ICK..Serine.threonine.protein.kinase. GLIPRPPAAQ P VHGRIDWSSK Site 2799
Saccharomyces.castelli.IME2 HLGPSEEVTN N CSLMNPNSFF Site 2778
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep ANPTVATKRK R AEALEQGILP Site 2513
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. QPEAGESMRA F GKNNSYGKSL Site 2514
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly ELRACTPEMR A RLVPEWYRGE Site 2515
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ESTDEDDVVS S SEADLLDKDV Site 2514
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli KENLLIGIKR K RDSIEQGTLK Site 2513
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho SQITQQSTNQ S RNPATTNQTE Site 2513
Homo.sapiens.HIPK2..Homeodomain.interacting.protei ISASPASTVY T GYPLSPAKVN Site 2921
Acyrthosiphon.pisum.CDK1 ---------- - --------AS  
Candida.tropicalis.CDK1 KKSNQVGGTK R SFTTFSMESE Site 2720
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQMMFNQQQN Site 2673
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G NHYSGGAGGT S SSLHKPGHNS Site 2515
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - -------QGP  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de QKEASLRSSS M PDSGRPAFRV Site 2514
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - -------ETS  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d QKDPGFRNSS Y PETGHGKNRR Site 2514
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA KHIYKEILSF S PIARKDSKKR Site 2518
Candida.albicans.SSN3..Serine.threonine.protein.ki QSHGANSTYK R SGIDDLPGGI Site 2686
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF SGVGGQKAPV S HRTDKYVSPY Site 2730
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA STAPHDTPEP S TSATASSATG Site 2514
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara LSFKEVRSFV P FPRRDSKRRN Site 2514
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SLHQQSTSDL K SPSFHENSNV Site 2757
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - -------AAA  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U HSYITASPAY A GFPMSPTKLS Site 2921
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d LKETGFHLTT T NQGASAAGPG Site 2516
Candida.dubliniensis.IME2 KKQSKAAGTK R SFTTFSLDSE Site 2719
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a MSTEHTLASD T DSSLDASTGP Site 2514
Aspergillus.niger.IME2 PTPPYEDGDW A KPAPAKFLTG Site 2791
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge EEWKRLTYEE V TCFVPPPLDS Site 2514
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d QNQEKQEGGD G HCEGKNLKRN Site 2780
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. QPEAGESMRA F GKNNSYGKSL Site 2514
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - -------PAA  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - --------DY  
Schizosaccharomyces.japonicus.IME2 TEGFHDSFDE L SLASTLRIPK Site 2775
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. EQNVDSWREH I FRELTDYART Site 2514
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P SVLAARGLDI D NFTPMPKQEM Site 2515
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- V SVKPRVLRQL Site 2515
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. PTLEMDGPMG T GEVSTTSGDV Site 2514
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. RVTYKEVLSF K PPRQLGARVS Site 2518
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 RISEECSTSV Q ENHDHSFSHT Site 2752
Debaryomyces.hansenii.SKY1 ---------- P VGGSGEDIPG Site 2514
Saccharomyces.cerevisiae.IME2 PTLKKSREKF E PHLSNSNQHF Site 2736
Schizosaccharomyces.japonicus.b.IME2 TPIRNARIQS N ASRSPSFRDA Site 2810
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -----KDSVD S HRPSGQKGVD Site 2511
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - -------SSG  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a TLTPSAMKSS P QIPHQTYSSI Site 2832
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -----YKDNL N SHLPSNQSTS Site 2514
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST GHVPLVERPA I EERLKHFVSA Site 2514
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk EEWKRLTHEE L TSFEPLVADS Site 2514
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de NQEKQEGGDG D CEGKNLKRNR Site 2787
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EVLEWEERTK N GVIRGQPASL Site 2514
Candida.albicans.IME2 KKSSKVAGTK R SFTTFSLDSE Site 2719
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d -------ACS K QEHFTHICTA Site 2514
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- R DPLLMPTWPS Site 2242
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. DEWKSLTYDE V ISFVPPPLDQ Site 2514
Kluyveromyces.lactis.IME2 PSEHASQNLI Q TSNSHNHTFQ Site 2786
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina DIESLQREIQ M DSPMLLADLP Site 2798
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. MSTDQTLASD T DSSLEASAGP Site 2514
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ELTYQEVLSF K PPEPPKPPGS Site 2518
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 QPNPAILLEQ L DKDKEKQNGK Site 2515
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ELTYQEVLSF K PLEPSQLPGT Site 2518
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d --AQIKRKAR N EGRNRRRQQV Site 2514
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ---------L  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ASTGFVLNAG I TQRQLAMGPG Site 2688
Neurospora.crassa.IME2 PTPPYNDEGD W AASASASIWA Site 2804
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - --------TA  
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar TFPHHRNKRA A STSTGTETQA Site 2514
Ashbya.gossypii.IME2 QHDILPPAQV R HEPTPNHSFE Site 2793
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi LYERYNCGEG Q DSSSSKTFDK Site 2514
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - --------VL  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p DENVELGHLS P DELSSVKKKL Site 2514
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace TRKRTTLKGR T LRAHTSRGPA Site 2762
Schizosaccharomyces.pombe.b.IME2 NPAEVQNICN D HAKFETSKSL Site 2747
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a LDDLPKEKLK E LIFEETARFQ Site 2513
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom HSYIAASPAY T GFPLSPTKLS Site 2921
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ---------P  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas QDTSRMSTSQ I PGRVASSGLQ Site 2514
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EVMDLEERTK N GVIRGQPSPL Site 2523
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ---------A  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable PGLQEDQLEP P AGQEAPLQGE Site 2779
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ---------L  
Yarrowia.lipolytica.IME2 PGLQTNSFRD R KIGAGAISSN Site 2790
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil AAAAAAAAAV S GNNASDEPSR Site 2514
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ---------V  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K -------EDL L DRDQRREDHF Site 2243
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly PVLASKGLDI D NFTPMNKSEM Site 2515
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk PSHARDALPV K LDDFVPIPIH Site 2513
Species Residue at Site 4908
in 'msaprobs'
muscle

The residue for every species at site 4908 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - --------DY  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo SAAFKSFISS T VAQPSEMPPS Site 2513
Scheffersomyces.stipitis.SKY1 ---------- P VGGSGEDIPG Site 2514
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 12:46, February 25th 2020
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