cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4907 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4907 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4907 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4907 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 VTSLADTLGV P GLTLKSDSHV Site 2820
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge EQHALTEEQM K ELIYREALAF Site 2512
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 PNQLKGASSE G TFSFSGSCVS Site 2513
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ AVARGARDEP L HRSLELLSLG Site 2716
Chlamydomonas.reinhardtii.LF4 ANVGKTNSKY I SPYSLRQLAG Site 2809
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g PPHVYESLDV D INNFEPIVVK Site 2513
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 GQPNPAILLE Q LDKDKEKQNG Site 2514
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 EQNAKNAAQD R NSNKSSKGFF Site 2721
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho TSQPQSSMGY S ATSQQPPQYS Site 2682
Schizosaccharomyces.octosporus.b.IME2 AYPNFMVYNP S SPVRINRSTS Site 2790
Candida.albicans.MAPK3..Extracellular.signal.regul FDFDKMKDQL T IEDLKKLLYE Site 2512
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - --------ES  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 SPNASHVLNA G IGGKDISLFS Site 2513
Suberites.domuncula.JNK..Stress.activated.protein. DHALDEQSIP L DQWKTRIYEE Site 2267
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---------N  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei YIGSSRGSTI Y TGYPLSPTKI Site 2920
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar SSNVLPALDS K KYFCKTRKSN Site 2513
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - --------SS  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM DISRDALKSL I FEETLKFKER Site 2510
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca HATHSKAQGS I DPHTRGSYSP Site 2513
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 NASQMLSQPF S MGLQSQNMMN Site 2726
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. PNQTTFYRQN K VVVPQSSSTT Site 2693
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - DAENVDDQMN  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d QLQKDPGYRG L AFQQPGRGKN Site 2514
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. TQQFSLVQNN F HWYTTVLIGT Site 2515
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SMSTDQTLAS D TDSSLETSAG Site 2513
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 INVTTLVSGP P LSDDSGADLP Site 2751
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SMSTDQTLAS D TDSSLETSAG Site 2513
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. KQHIYKEIVN F SPIARKDSRR Site 2517
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QSAAFKSFIS S TVAQPSEMPP Site 2512
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar AAIDLHNTSL A SQQKTTNNGT Site 2765
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SMSTDPTLPS D TDSSLETSAG Site 2513
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d QSSAYGKLYR G PTRVPPRGGR Site 2819
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. KTDTQKDIKP H LKHYHLPTIN Site 2687
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. LPAHLYQFTP D EVEAMTEAQR Site 2512
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G LPEDLFRFLP S EIEVMSEAQK Site 2512
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 GQPNPAILLE Q LDKDKEKQNG Site 2514
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 GKSTRRHYES V VKGIDNLQVS Site 2701
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO GPLSPAQVAA S KHAAHFAPTN Site 2919
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - --------ET  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl QSAAFKSFIS S TVAQPSEMPP Site 2512
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 GSSILPALDN K KYYCDTKKLN Site 2513
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PHSYIAASPA Y TGFPLSPTKL Site 2920
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O DLKETGFHLT T TNQGASAAGP Site 2515
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d GGQNGIGFTR A ARTRMPNLND Site 2911
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O DLKETGFHLT T TNQGASAAGP Site 2515
Naegleria.gruberi.LF4 VHASLSNSNK N EPIEKQQKKY Site 2738
Saccharomyces.bayanus.IME2 IPTLEKSQEK F ETHLSNQNQH Site 2735
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - --------SS  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a QWKRLTFTEI L TFQPAPAVAE Site 2513
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQQQIQSQP E PIQVDNVEQT Site 2513
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ---------P  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---------Q  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ---------V  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d NGWKHSRSRS S QPDEVIFLAS Site 2890
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a LGGYSQAYGT V CRSALGRLPL Site 2747
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific NLAMMCNSGR K LDVSECVKSS Site 2513
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ---------N  
Aspergillus.nidulans.IME2 QWPTPPYDDG D WMNPASTKFL Site 2787
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se PQSAAYKNFA S SSVAQASELP Site 2512
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. LNIVNRTQPV P SVHGRTDWVA Site 2780
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SMSTDQTLAS D TDSSLEASAG Site 2513
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. ELKGVPAEIL V KLVPEHARKQ Site 2514
Penicillium.marneffei.IME2 QWPTPPYGEQ E WASSVANSIL Site 2790
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen DPYDQSFESR D LEIEEWKSKI Site 2513
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a LGDLNGACIP E HPGDLVQTEA Site 2783
Drosophila.melanogaster.MAK NRTEDEKLTA W MVAENGNLIL Site 2784
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de PAQSYGKPYR G AARVLPRGGR Site 2817
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep -LPNAFSKPI P YPPRLPINKK Site 2513
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d LMPTFPHHRN K RAAPAAAEGQ Site 2513
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SMSTDQTLAS D TDSSLEASAG Site 2513
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SMSTEQTLAS D TDSSLDASTG Site 2510
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 GQPNPAILLE Q LDKDKEKQNG Site 2514
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p SEDDSEVSSK R VLSTSLRSES Site 2513
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen SSQALTETPT S SDWQSTDATP Site 2513
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. IYKEVMDWEE R SKNGVVKDQP Site 2512
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - --------PA  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a LGDLNGACIS E HPGDLVQTEA Site 2783
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d LQKEANIRST S MPDSGRPAFR Site 2513
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - --------PA  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein DIKTMTYQGT K RGSQGGDNLH Site 2513
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. TPILRKDSKR K SGMSIKDEFE Site 2512
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ---------Q  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - --------SD  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH GNALPPLFDF T SHELASHTDL Site 2514
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SPSTTNTTSS T TNNTTTTTTT Site 2686
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot EKENLLIGIK R KRDSIEQGTL Site 2513
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str EEWRAMLFAE L QNYYRTHDVY Site 2513
Debaryomyces.hansenii.IME2 AALKEPLEDE F GIIADISFGS Site 2750
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati LFNWLPGELD E VPADIVRKLQ Site 2512
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAAVQVNGTN I VSGSSSSNGP Site 2512
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE KLKEEIDQRM R SRRRTNRAAS Site 2516
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - --------QM  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de VHDFHVDRPL E ESLLNPELIR Site 2513
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ---------V  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ------CKEN L DSHMSSSQNS Site 2513
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - SDIPGWFEEV  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP DFDRRKEELT M LDLKELLYEE Site 2513
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ADKRFSQHLE L CNGAQSGPYH Site 2513
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AGAATAAATA T GAIGATNAGG Site 2733
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas EKDKKKMLEN K NRFDQTADQE Site 2076
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. LGGYSQAYGT V CHSALGHLPL Site 2750
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d SVASHQGAGS P LSDDSEADLP Site 2758
Dictyostelium.discoideum.CDK10..Probable.cyclin.de QTNQNNQTNQ N NKTSQNNNMD Site 2513
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d REALIHRAQV N QAALLTYHEN Site 2920
Ajellomyces.capsulatus.CDK1 ---------- - ---SAYSGRE  
Dictystelium.discoideum.MAPK3..Extracellular.signa SSSELFNLLQ Q QKQQIHQQVN Site 2516
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ------CKEN L DSHLPPSQNT Site 2513
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep TFPHHRNKRA T PATSLGTESQ Site 2513
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SMSTDPTLAS D TDSSLEAAAG Site 2513
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. QHIYKEISNF S PIARKDSRRR Site 2513
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri NPHSAAFKTF I RSTAWHSSKV Site 2512
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SMSTDQTLAS D TDSSLEASAG Site 2513
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 DYAQSPAGKN N SISTVSFDSE Site 2726
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen IEEWKRQTYE E MISFEPPVFD Site 2513
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar MSQSSSSGSS N ARQEPQPKSR Site 2856
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. LPLLHFEESE L QGLSSNDIYR Site 2512
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D PNHHAPYDHM R PTEDDIQEAD Site 2885
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U YIPASPTSTV Y TGYPLTPPKV Site 2806
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d SSRILPALDN K KYHCSTKRFN Site 2513
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SQALTEAQTG Q DWQPSDATTA Site 2513
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GRLPSSSNFR P ASGNIVQPAA Site 2513
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d QQNLNLGIKR K RTEGMDQKDI Site 2509
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d IHDFHVDRPL E ESLLNPELIR Site 2513
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi TLYEHYSGGE S HNSSSSKTFE Site 2513
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ATAASDTNAG D RGQTNNAASA Site 2513
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable DSSAFSKPGL P PGGSPQLGCT Site 2763
Aspergillus.fumigatus.IME2 DHASSNRQWP T PPYEERDWMN Site 2779
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan TSLPQSSMGY S STSQQPPQYS Site 2682
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha KKHIYKEILS F SPIAQKDSKK Site 2517
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S PQSAAYKNFA S SSVAQASELP Site 2512
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma YISASPASTV Y TGYPLSPAKV Site 2920
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina DDLPKERLKE L IFQETARFQP Site 2513
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d LQKDPGFRNS S YPETGHGKNR Site 2513
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. LMPTFPHHRN K RAAPATSEGQ Site 2513
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de SSTVFPAVEN R RNYNNLRKFN Site 2513
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S HTVEQWKELI Y EEVMDYEAHN Site 2511
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. KSNDFSLVPF S LSPLLPFASP Site 2516
Candida.glabrata.IME2 PNTNEAKAST Y EFAFSNPCHA Site 2772
Homo.sapiens.MAK..Serine.threonine.protein.kinase. LNIVNRAQPI P SVHGRTDWVA Site 2780
Schizosaccharomyces.pombe.IME2 SLAGSLTLPD S KIIDRSKTHV Site 2808
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P FDFDKRKDEL S IDDLKKMLYE Site 2512
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom QGLPAHHPHP H GPPRTTSFLQ Site 2776
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. SSSGQGQQAQ T PTGKQTDKTK Site 2513
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d QLQKDPGYRG L AFQHPGRGKS Site 2514
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d IPGSHISPTP D GRKQVVQLKF Site 2512
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IPSHARDALP V KLDDFVPIPI Site 2512
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD NAKQRKQKQK W SKAGTQKQSQ Site 2680
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR GRALPQLEMD G PNEVSATGGD Site 2513
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PGLIPRPPAA Q PVHGRTDWAS Site 2798
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---------Q  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ADIESLQREI Q MDSPMLLADL Site 2797
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. IDEWKSLTYD E VISFVPPPLD Site 2513
Lachancea.thermotolerans.SKY1 ---------- - ADIPGWSQEV  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a ATLTPSAMKS S PQIPHKTYSS Site 2831
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. KRVTYKEVLS F KPPRQLGARV Site 2517
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U YIGASRGSAI Y TGYPLSPTNI Site 2920
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - --------PA  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. VKLKPEMCDL S ASYRKRHHLV Site 2513
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD IIKKKKEERK K QTNPTKPDTT Site 2513
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ---------Q  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ATAASDANTG D RGQTNNAASA Site 2513
Drosophila.melanogaster.GSK3H..Putative.glycogen.s CNSTYISDDM D EASESDDDDF Site 2736
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD SRQNQTDRKK P EKKAENQRKT Site 2512
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 DNDTTTSTNT T VQEQHHSFTH Site 2762
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ELDDLPKEKL K ELIFEETARF Site 2513
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. VRLKPEMCDL L ASYQKGHHPA Site 2513
Cryptococcus.neoformans.IME2 AQTLPSFSDI A NYAFEGRNKQ Site 2819
Homo.sapiens.HIPK4..Homeodomain.interacting.protei GLPPRRSHQH G PPRGATSFLQ Site 2777
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 VDAFYENVDH Y DESFANSSFD Site 2699
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom YIGSSRGSTI Y TGYPLSPTKI Site 2920
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AQQQQQQQQQ Q QMMFNNQQQG Site 2718
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep HEFTVDRPLH E SVVDPSLIQK Site 2513
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. LASSNMSPAP E MKKHNKYKFD Site 2512
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ---SYYSGRA  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. KKTDPQKDLK P APQQCRLPTI Site 2686
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 -------RDH N NYNEDNIGID Site 2513
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - --------PT  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ADIESLQREI Q MDSPMLLSDL Site 2797
Mus.musculus.ICK..Serine.threonine.protein.kinase. PGLIPRPPAA Q PVHGRIDWSS Site 2798
Saccharomyces.castelli.IME2 PHLGPSEEVT N NCSLMNPNSF Site 2777
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep PANPTVATKR K RAEALEQGIL Site 2512
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. LQPEAGESMR A FGKNNSYGKS Site 2513
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly DELRACTPEM R ARLVPEWYRG Site 2514
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS GESTDEDDVV S SSEADLLDKD Site 2513
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli EKENLLIGIK R KRDSIEQGTL Site 2512
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho GSQITQQSTN Q SRNPATTNQT Site 2512
Homo.sapiens.HIPK2..Homeodomain.interacting.protei YISASPASTV Y TGYPLSPAKV Site 2920
Acyrthosiphon.pisum.CDK1 ---------- - ---------A  
Candida.tropicalis.CDK1 KKKSNQVGGT K RSFTTFSMES Site 2719
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQMMFNQQQ Site 2672
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G GNHYSGGAGG T SSSLHKPGHN Site 2514
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - --------QG  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de LQKEASLRSS S MPDSGRPAFR Site 2513
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - --------ET  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d LQKDPGFRNS S YPETGHGKNR Site 2513
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA KKHIYKEILS F SPIARKDSKK Site 2517
Candida.albicans.SSN3..Serine.threonine.protein.ki LQSHGANSTY K RSGIDDLPGG Site 2685
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF PSGVGGQKAP V SHRTDKYVSP Site 2729
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SSTAPHDTPE P STSATASSAT Site 2513
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara RLSFKEVRSF V PFPRRDSKRR Site 2513
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de TSLHQQSTSD L KSPSFHENSN Site 2756
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - --------AA  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U SHSYITASPA Y AGFPMSPTKL Site 2920
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d DLKETGFHLT T TNQGASAAGP Site 2515
Candida.dubliniensis.IME2 KKKQSKAAGT K RSFTTFSLDS Site 2718
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SMSTEHTLAS D TDSSLDASTG Site 2513
Aspergillus.niger.IME2 WPTPPYEDGD W AKPAPAKFLT Site 2790
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge IEEWKRLTYE E VTCFVPPPLD Site 2513
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d DQNQEKQEGG D GHCEGKNLKR Site 2779
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. LQPEAGESMR A FGKNNSYGKS Site 2513
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - --------PA  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ---------D  
Schizosaccharomyces.japonicus.IME2 FTEGFHDSFD E LSLASTLRIP Site 2774
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. VEQNVDSWRE H IFRELTDYAR Site 2513
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P RSVLAARGLD I DNFTPMPKQE Site 2514
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - VSVKPRVLRQ  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. LPTLEMDGPM G TGEVSTTSGD Site 2513
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. KRVTYKEVLS F KPPRQLGARV Site 2517
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 PRISEECSTS V QENHDHSFSH Site 2751
Debaryomyces.hansenii.SKY1 ---------- - PVGGSGEDIP  
Saccharomyces.cerevisiae.IME2 IPTLKKSREK F EPHLSNSNQH Site 2735
Schizosaccharomyces.japonicus.b.IME2 ETPIRNARIQ S NASRSPSFRD Site 2809
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ------KDSV D SHRPSGQKGV Site 2510
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - --------SS  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a ATLTPSAMKS S PQIPHQTYSS Site 2831
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ------YKDN L NSHLPSNQST Site 2513
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST LGHVPLVERP A IEERLKHFVS Site 2513
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk LEEWKRLTHE E LTSFEPLVAD Site 2513
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de PNQEKQEGGD G DCEGKNLKRN Site 2786
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act KEVLEWEERT K NGVIRGQPAS Site 2513
Candida.albicans.IME2 KKKSSKVAGT K RSFTTFSLDS Site 2718
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d --------AC S KQEHFTHICT Site 2243
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - RDPLLMPTWP  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. IDEWKSLTYD E VISFVPPPLD Site 2513
Kluyveromyces.lactis.IME2 DPSEHASQNL I QTSNSHNHTF Site 2785
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ADIESLQREI Q MDSPMLLADL Site 2797
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SMSTDQTLAS D TDSSLEASAG Site 2513
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. KELTYQEVLS F KPPEPPKPPG Site 2517
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 GQPNPAILLE Q LDKDKEKQNG Site 2514
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. KELTYQEVLS F KPLEPSQLPG Site 2517
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---AQIKRKA R NEGRNRRRQQ Site 2513
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SASTGFVLNA G ITQRQLAMGP Site 2687
Neurospora.crassa.IME2 WPTPPYNDEG D WAASASASIW Site 2803
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ---------T  
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar PTFPHHRNKR A ASTSTGTETQ Site 2513
Ashbya.gossypii.IME2 PQHDILPPAQ V RHEPTPNHSF Site 2792
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi TLYERYNCGE G QDSSSSKTFD Site 2513
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ---------V  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p FDENVELGHL S PDELSSVKKK Site 2513
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace HTRKRTTLKG R TLRAHTSRGP Site 2761
Schizosaccharomyces.pombe.b.IME2 PNPAEVQNIC N DHAKFETSKS Site 2746
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ELDDLPKEKL K ELIFEETARF Site 2512
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PHSYIAASPA Y TGFPLSPTKL Site 2920
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas RQDTSRMSTS Q IPGRVASSGL Site 2513
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac KEVMDLEERT K NGVIRGQPSP Site 2522
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable QPGLQEDQLE P PAGQEAPLQG Site 2778
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 YPGLQTNSFR D RKIGAGAISS Site 2789
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil LAAAAAAAAA V SGNNASDEPS Site 2513
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K --------ED L LDRDQRREDH Site 2242
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RPVLASKGLD I DNFTPMNKSE Site 2514
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IPSHARDALP V KLDDFVPIPI Site 2512
Species Residue at Site 4907
in 'msaprobs'
muscle

The residue for every species at site 4907 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ---------D  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QSAAFKSFIS S TVAQPSEMPP Site 2512
Scheffersomyces.stipitis.SKY1 ---------- - PVGGSGEDIP  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 01:45, December 7th 2019
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