cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


Select an Alignment:

Select a Site:

Site 4906 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4906 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4906 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4906 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 CVTSLADTLG V PGLTLKSDSH Site 2819
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge FEQHALTEEQ M KELIYREALA Site 2511
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 NPNQLKGASS E GTFSFSGSCV Site 2512
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ AAVARGARDE P LHRSLELLSL Site 2715
Chlamydomonas.reinhardtii.LF4 KANVGKTNSK Y ISPYSLRQLA Site 2808
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LPPHVYESLD V DINNFEPIVV Site 2512
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 QGQPNPAILL E QLDKDKEKQN Site 2513
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 DEQNAKNAAQ D RNSNKSSKGF Site 2720
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho STSQPQSSMG Y SATSQQPPQY Site 2681
Schizosaccharomyces.octosporus.b.IME2 QAYPNFMVYN P SSPVRINRST Site 2789
Candida.albicans.MAPK3..Extracellular.signal.regul FFDFDKMKDQ L TIEDLKKLLY Site 2511
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ---------E  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 NSPNASHVLN A GIGGKDISLF Site 2512
Suberites.domuncula.JNK..Stress.activated.protein. YDHALDEQSI P LDQWKTRIYE Site 2266
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei SYIGSSRGST I YTGYPLSPTK Site 2919
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar SSSNVLPALD S KKYFCKTRKS Site 2512
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ---------S  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM DDISRDALKS L IFEETLKFKE Site 2509
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca DHATHSKAQG S IDPHTRGSYS Site 2512
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 SNASQMLSQP F SMGLQSQNMM Site 2725
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. NPNQTTFYRQ N KVVVPQSSST Site 2692
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - -DAENVDDQM  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d IQLQKDPGYR G LAFQQPGRGK Site 2513
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. GTQQFSLVQN N FHWYTTVLIG Site 2514
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SSMSTDQTLA S DTDSSLETSA Site 2512
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 NINVTTLVSG P PLSDDSGADL Site 2750
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SSMSTDQTLA S DTDSSLETSA Site 2512
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. WKQHIYKEIV N FSPIARKDSR Site 2516
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo PQSAAFKSFI S STVAQPSEMP Site 2511
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar LAAIDLHNTS L ASQQKTTNNG Site 2764
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SSMSTDPTLP S DTDSSLETSA Site 2512
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d TQSSAYGKLY R GPTRVPPRGG Site 2818
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. KKTDTQKDIK P HLKHYHLPTI Site 2686
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. PLPAHLYQFT P DEVEAMTEAQ Site 2511
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G DLPEDLFRFL P SEIEVMSEAQ Site 2511
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 QGQPNPAILL E QLDKDKEKQN Site 2513
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 AGKSTRRHYE S VVKGIDNLQV Site 2700
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO FGPLSPAQVA A SKHAAHFAPT Site 2918
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ---------E  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl PQSAAFKSFI S STVAQPSEMP Site 2511
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 TGSSILPALD N KKYYCDTKKL Site 2512
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PPHSYIAASP A YTGFPLSPTK Site 2919
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O DDLKETGFHL T TTNQGASAAG Site 2514
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d KGGQNGIGFT R AARTRMPNLN Site 2910
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O DDLKETGFHL T TTNQGASAAG Site 2514
Naegleria.gruberi.LF4 NVHASLSNSN K NEPIEKQQKK Site 2737
Saccharomyces.bayanus.IME2 LIPTLEKSQE K FETHLSNQNQ Site 2734
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ---------S  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a EQWKRLTFTE I LTFQPAPAVA Site 2512
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQQQQIQSQ P EPIQVDNVEQ Site 2512
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d YNGWKHSRSR S SQPDEVIFLA Site 2889
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a ALGGYSQAYG T VCRSALGRLP Site 2746
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific SNLAMMCNSG R KLDVSECVKS Site 2512
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 RQWPTPPYDD G DWMNPASTKF Site 2786
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se NPQSAAYKNF A SSSVAQASEL Site 2511
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. NLNIVNRTQP V PSVHGRTDWV Site 2779
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SSMSTDQTLA S DTDSSLEASA Site 2512
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. HELKGVPAEI L VKLVPEHARK Site 2513
Penicillium.marneffei.IME2 RQWPTPPYGE Q EWASSVANSI Site 2789
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ADPYDQSFES R DLEIEEWKSK Site 2512
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a KLGDLNGACI P EHPGDLVQTE Site 2782
Drosophila.melanogaster.MAK SNRTEDEKLT A WMVAENGNLI Site 2783
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GPAQSYGKPY R GAARVLPRGG Site 2816
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep --LPNAFSKP I PYPPRLPINK Site 2512
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ELMPTFPHHR N KRAAPAAAEG Site 2512
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SSMSTDQTLA S DTDSSLEASA Site 2512
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SSMSTEQTLA S DTDSSLDAST Site 2509
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 QGQPNPAILL E QLDKDKEKQN Site 2513
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p ISEDDSEVSS K RVLSTSLRSE Site 2512
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen PSSQALTETP T SSDWQSTDAT Site 2512
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. LIYKEVMDWE E RSKNGVVKDQ Site 2511
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ---------P  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a KLGDLNGACI S EHPGDLVQTE Site 2782
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d QLQKEANIRS T SMPDSGRPAF Site 2512
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ---------P  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein SDIKTMTYQG T KRGSQGGDNL Site 2512
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. YTPILRKDSK R KSGMSIKDEF Site 2511
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ---------S  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH NGNALPPLFD F TSHELASHTD Site 2513
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD QSPSTTNTTS S TTNNTTTTTT Site 2685
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot KEKENLLIGI K RKRDSIEQGT Site 2512
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str VEEWRAMLFA E LQNYYRTHDV Site 2512
Debaryomyces.hansenii.IME2 LAALKEPLED E FGIIADISFG Site 2749
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati PLFNWLPGEL D EVPADIVRKL Site 2511
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAAAVQVNGT N IVSGSSSSNG Site 2511
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE AKLKEEIDQR M RSRRRTNRAA Site 2515
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ---------Q  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de HVHDFHVDRP L EESLLNPELI Site 2512
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. -------CKE N LDSHMSSSQN Site 2512
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - -SDIPGWFEE  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP FDFDRRKEEL T MLDLKELLYE Site 2512
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U FADKRFSQHL E LCNGAQSGPY Site 2512
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GAGAATAAAT A TGAIGATNAG Site 2732
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas SEKDKKKMLE N KNRFDQTADQ Site 2075
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. LLGGYSQAYG T VCHSALGHLP Site 2749
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d SSVASHQGAG S PLSDDSEADL Site 2757
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NQTNQNNQTN Q NNKTSQNNNM Site 2512
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d MREALIHRAQ V NQAALLTYHE Site 2919
Ajellomyces.capsulatus.CDK1 ---------- - ----SAYSGR  
Dictystelium.discoideum.MAPK3..Extracellular.signa QSSSELFNLL Q QQKQQIHQQV Site 2515
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep -------CKE N LDSHLPPSQN Site 2512
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep PTFPHHRNKR A TPATSLGTES Site 2512
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SSMSTDPTLA S DTDSSLEAAA Site 2512
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. KQHIYKEISN F SPIARKDSRR Site 2512
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri INPHSAAFKT F IRSTAWHSSK Site 2511
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SSMSTDQTLA S DTDSSLEASA Site 2512
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 RDYAQSPAGK N NSISTVSFDS Site 2725
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen DIEEWKRQTY E EMISFEPPVF Site 2512
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar PMSQSSSSGS S NARQEPQPKS Site 2855
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. SLPLLHFEES E LQGLSSNDIY Site 2511
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KPNHHAPYDH M RPTEDDIQEA Site 2884
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U TYIPASPTST V YTGYPLTPPK Site 2805
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d TSSRILPALD N KKYHCSTKRF Site 2512
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen SSQALTEAQT G QDWQPSDATT Site 2512
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GGRLPSSSNF R PASGNIVQPA Site 2512
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d EQQNLNLGIK R KRTEGMDQKD Site 2508
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d HIHDFHVDRP L EESLLNPELI Site 2512
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi KTLYEHYSGG E SHNSSSSKTF Site 2512
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen NATAASDTNA G DRGQTNNAAS Site 2512
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SDSSAFSKPG L PPGGSPQLGC Site 2762
Aspergillus.fumigatus.IME2 IDHASSNRQW P TPPYEERDWM Site 2778
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan STSLPQSSMG Y SSTSQQPPQY Site 2681
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha WKKHIYKEIL S FSPIAQKDSK Site 2516
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S NPQSAAYKNF A SSSVAQASEL Site 2511
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma TYISASPAST V YTGYPLSPAK Site 2919
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina LDDLPKERLK E LIFQETARFQ Site 2512
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d QLQKDPGFRN S SYPETGHGKN Site 2512
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ELMPTFPHHR N KRAAPATSEG Site 2512
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de ASSTVFPAVE N RRNYNNLRKF Site 2512
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EHTVEQWKEL I YEEVMDYEAH Site 2510
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. WKSNDFSLVP F SLSPLLPFAS Site 2515
Candida.glabrata.IME2 SPNTNEAKAS T YEFAFSNPCH Site 2771
Homo.sapiens.MAK..Serine.threonine.protein.kinase. NLNIVNRAQP I PSVHGRTDWV Site 2779
Schizosaccharomyces.pombe.IME2 TSLAGSLTLP D SKIIDRSKTH Site 2807
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P FFDFDKRKDE L SIDDLKKMLY Site 2511
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom AQGLPAHHPH P HGPPRTTSFL Site 2775
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ASSSGQGQQA Q TPTGKQTDKT Site 2512
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d IQLQKDPGYR G LAFQHPGRGK Site 2513
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d LIPGSHISPT P DGRKQVVQLK Site 2511
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LIPSHARDAL P VKLDDFVPIP Site 2511
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SNAKQRKQKQ K WSKAGTQKQS Site 2679
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR SGRALPQLEM D GPNEVSATGG Site 2512
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. TPGLIPRPPA A QPVHGRTDWA Site 2797
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act PADIESLQRE I QMDSPMLLAD Site 2796
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. LIDEWKSLTY D EVISFVPPPL Site 2512
Lachancea.thermotolerans.SKY1 ---------- - -ADIPGWSQE  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a QATLTPSAMK S SPQIPHKTYS Site 2830
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. WKRVTYKEVL S FKPPRQLGAR Site 2516
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SYIGASRGSA I YTGYPLSPTN Site 2919
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ---------P  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. GVKLKPEMCD L SASYRKRHHL Site 2512
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD DIIKKKKEER K KQTNPTKPDT Site 2512
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen NATAASDANT G DRGQTNNAAS Site 2512
Drosophila.melanogaster.GSK3H..Putative.glycogen.s QCNSTYISDD M DEASESDDDD Site 2735
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD KSRQNQTDRK K PEKKAENQRK Site 2511
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 SDNDTTTSTN T TVQEQHHSFT Site 2761
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a MELDDLPKEK L KELIFEETAR Site 2512
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. GVRLKPEMCD L LASYQKGHHP Site 2512
Cryptococcus.neoformans.IME2 SAQTLPSFSD I ANYAFEGRNK Site 2818
Homo.sapiens.HIPK4..Homeodomain.interacting.protei QGLPPRRSHQ H GPPRGATSFL Site 2776
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 NVDAFYENVD H YDESFANSSF Site 2698
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom SYIGSSRGST I YTGYPLSPTK Site 2919
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AAQQQQQQQQ Q QQMMFNNQQQ Site 2717
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep PHEFTVDRPL H ESVVDPSLIQ Site 2512
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. QLASSNMSPA P EMKKHNKYKF Site 2511
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----SYYSGR  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SKKTDPQKDL K PAPQQCRLPT Site 2685
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 --------RD H NNYNEDNIGI Site 2243
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ---------P  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a PADIESLQRE I QMDSPMLLSD Site 2796
Mus.musculus.ICK..Serine.threonine.protein.kinase. TPGLIPRPPA A QPVHGRIDWS Site 2797
Saccharomyces.castelli.IME2 IPHLGPSEEV T NNCSLMNPNS Site 2776
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep EPANPTVATK R KRAEALEQGI Site 2511
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. RLQPEAGESM R AFGKNNSYGK Site 2512
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly EDELRACTPE M RARLVPEWYR Site 2513
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS DGESTDEDDV V SSSEADLLDK Site 2512
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli KEKENLLIGI K RKRDSIEQGT Site 2511
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho KGSQITQQST N QSRNPATTNQ Site 2511
Homo.sapiens.HIPK2..Homeodomain.interacting.protei TYISASPAST V YTGYPLSPAK Site 2919
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 DKKKSNQVGG T KRSFTTFSME Site 2718
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQMMFNQQ Site 2671
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G SGNHYSGGAG G TSSSLHKPGH Site 2513
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ---------Q  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de QLQKEASLRS S SMPDSGRPAF Site 2512
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ---------E  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d QLQKDPGFRN S SYPETGHGKN Site 2512
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA WKKHIYKEIL S FSPIARKDSK Site 2516
Candida.albicans.SSN3..Serine.threonine.protein.ki QLQSHGANST Y KRSGIDDLPG Site 2684
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF PPSGVGGQKA P VSHRTDKYVS Site 2728
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SSSTAPHDTP E PSTSATASSA Site 2512
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara KRLSFKEVRS F VPFPRRDSKR Site 2512
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de STSLHQQSTS D LKSPSFHENS Site 2755
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ---------A  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PSHSYITASP A YAGFPMSPTK Site 2919
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d DDLKETGFHL T TTNQGASAAG Site 2514
Candida.dubliniensis.IME2 LKKKQSKAAG T KRSFTTFSLD Site 2717
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SSMSTEHTLA S DTDSSLDAST Site 2512
Aspergillus.niger.IME2 QWPTPPYEDG D WAKPAPAKFL Site 2789
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge DIEEWKRLTY E EVTCFVPPPL Site 2512
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d VDQNQEKQEG G DGHCEGKNLK Site 2778
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. RLQPEAGESM R AFGKNNSYGK Site 2512
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ---------P  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 FFTEGFHDSF D ELSLASTLRI Site 2773
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. DVEQNVDSWR E HIFRELTDYA Site 2512
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P QRSVLAARGL D IDNFTPMPKQ Site 2513
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - -VSVKPRVLR  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. PLPTLEMDGP M GTGEVSTTSG Site 2512
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. WKRVTYKEVL S FKPPRQLGAR Site 2516
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 VPRISEECST S VQENHDHSFS Site 2750
Debaryomyces.hansenii.SKY1 ---------- - -PVGGSGEDI  
Saccharomyces.cerevisiae.IME2 LIPTLKKSRE K FEPHLSNSNQ Site 2734
Schizosaccharomyces.japonicus.b.IME2 QETPIRNARI Q SNASRSPSFR Site 2808
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un -------KDS V DSHRPSGQKG Site 2509
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ---------S  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a QATLTPSAMK S SPQIPHQTYS Site 2830
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep -------YKD N LNSHLPSNQS Site 2512
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ELGHVPLVER P AIEERLKHFV Site 2512
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk PLEEWKRLTH E ELTSFEPLVA Site 2512
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de DPNQEKQEGG D GDCEGKNLKR Site 2785
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act YKEVLEWEER T KNGVIRGQPA Site 2512
Candida.albicans.IME2 LKKKSSKVAG T KRSFTTFSLD Site 2717
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------A C SKQEHFTHIC Site 2242
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - -RDPLLMPTW  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. LIDEWKSLTY D EVISFVPPPL Site 2512
Kluyveromyces.lactis.IME2 LDPSEHASQN L IQTSNSHNHT Site 2784
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina PADIESLQRE I QMDSPMLLAD Site 2796
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SSMSTDQTLA S DTDSSLEASA Site 2512
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. WKELTYQEVL S FKPPEPPKPP Site 2516
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 QGQPNPAILL E QLDKDKEKQN Site 2513
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. WKELTYQEVL S FKPLEPSQLP Site 2516
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ----AQIKRK A RNEGRNRRRQ Site 2512
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME SSASTGFVLN A GITQRQLAMG Site 2686
Neurospora.crassa.IME2 KWPTPPYNDE G DWAASASASI Site 2802
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar MPTFPHHRNK R AASTSTGTET Site 2512
Ashbya.gossypii.IME2 IPQHDILPPA Q VRHEPTPNHS Site 2791
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi KTLYERYNCG E GQDSSSSKTF Site 2512
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p EFDENVELGH L SPDELSSVKK Site 2512
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace CHTRKRTTLK G RTLRAHTSRG Site 2760
Schizosaccharomyces.pombe.b.IME2 TPNPAEVQNI C NDHAKFETSK Site 2745
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a MELDDLPKEK L KELIFEETAR Site 2511
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PPHSYIAASP A YTGFPLSPTK Site 2919
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas GRQDTSRMST S QIPGRVASSG Site 2512
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac YKEVMDLEER T KNGVIRGQPS Site 2521
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable AQPGLQEDQL E PPAGQEAPLQ Site 2777
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 VYPGLQTNSF R DRKIGAGAIS Site 2788
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ILAAAAAAAA A VSGNNASDEP Site 2512
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------E D LLDRDQRRED Site 2241
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly MRPVLASKGL D IDNFTPMNKS Site 2513
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LIPSHARDAL P VKLDDFVPIP Site 2511
Species Residue at Site 4906
in 'msaprobs'
muscle

The residue for every species at site 4906 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo PQSAAFKSFI S STVAQPSEMP Site 2511
Scheffersomyces.stipitis.SKY1 ---------- - -PVGGSGEDI  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 00:30, August 11th 2020
Questions/Comments? help@phylobot.com