cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4905 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4905 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4905 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4905 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 FCVTSLADTL G VPGLTLKSDS Site 2818
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge DFEQHALTEE Q MKELIYREAL Site 2510
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 LNPNQLKGAS S EGTFSFSGSC Site 2511
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RAAVARGARD E PLHRSLELLS Site 2714
Chlamydomonas.reinhardtii.LF4 YKANVGKTNS K YISPYSLRQL Site 2807
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ILPPHVYESL D VDINNFEPIV Site 2511
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 HQGQPNPAIL L EQLDKDKEKQ Site 2512
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NDEQNAKNAA Q DRNSNKSSKG Site 2719
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PSTSQPQSSM G YSATSQQPPQ Site 2680
Schizosaccharomyces.octosporus.b.IME2 CQAYPNFMVY N PSSPVRINRS Site 2788
Candida.albicans.MAPK3..Extracellular.signal.regul DFFDFDKMKD Q LTIEDLKKLL Site 2510
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 SNSPNASHVL N AGIGGKDISL Site 2511
Suberites.domuncula.JNK..Stress.activated.protein. RYDHALDEQS I PLDQWKTRIY Site 2265
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QSYIGSSRGS T IYTGYPLSPT Site 2918
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar LSSSNVLPAL D SKKYFCKTRK Site 2511
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM NDDISRDALK S LIFEETLKFK Site 2508
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca MDHATHSKAQ G SIDPHTRGSY Site 2511
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ESNASQMLSQ P FSMGLQSQNM Site 2724
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. SNPNQTTFYR Q NKVVVPQSSS Site 2691
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - --DAENVDDQ  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d EIQLQKDPGY R GLAFQQPGRG Site 2512
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. IGTQQFSLVQ N NFHWYTTVLI Site 2513
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ISSMSTDQTL A SDTDSSLETS Site 2511
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 YNINVTTLVS G PPLSDDSGAD Site 2749
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ISSMSTDQTL A SDTDSSLETS Site 2511
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. EWKQHIYKEI V NFSPIARKDS Site 2515
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo NPQSAAFKSF I SSTVAQPSEM Site 2510
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar SLAAIDLHNT S LASQQKTTNN Site 2763
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. ASSMSTDPTL P SDTDSSLETS Site 2511
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PTQSSAYGKL Y RGPTRVPPRG Site 2817
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. NKKTDTQKDI K PHLKHYHLPT Site 2685
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. NPLPAHLYQF T PDEVEAMTEA Site 2510
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G KDLPEDLFRF L PSEIEVMSEA Site 2510
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 HQGQPNPAIL L EQLDKDKEKQ Site 2512
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 EAGKSTRRHY E SVVKGIDNLQ Site 2699
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QFGPLSPAQV A ASKHAAHFAP Site 2917
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl NPQSAAFKSF I SSTVAQPSEM Site 2510
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 LTGSSILPAL D NKKYYCDTKK Site 2511
Homo.sapiens.HIPK3..Homeodomain.interacting.protei FPPHSYIAAS P AYTGFPLSPT Site 2918
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O DDDLKETGFH L TTTNQGASAA Site 2513
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d NKGGQNGIGF T RAARTRMPNL Site 2909
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O DDDLKETGFH L TTTNQGASAA Site 2513
Naegleria.gruberi.LF4 NNVHASLSNS N KNEPIEKQQK Site 2736
Saccharomyces.bayanus.IME2 FLIPTLEKSQ E KFETHLSNQN Site 2733
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a LEQWKRLTFT E ILTFQPAPAV Site 2511
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQQQQQIQS Q PEPIQVDNVE Site 2511
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d RYNGWKHSRS R SSQPDEVIFL Site 2888
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a AALGGYSQAY G TVCRSALGRL Site 2745
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ASNLAMMCNS G RKLDVSECVK Site 2511
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 TRQWPTPPYD D GDWMNPASTK Site 2785
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se INPQSAAYKN F ASSSVAQASE Site 2510
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. KNLNIVNRTQ P VPSVHGRTDW Site 2778
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ISSMSTDQTL A SDTDSSLEAS Site 2511
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. SHELKGVPAE I LVKLVPEHAR Site 2512
Penicillium.marneffei.IME2 SRQWPTPPYG E QEWASSVANS Site 2788
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen EADPYDQSFE S RDLEIEEWKS Site 2511
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a NKLGDLNGAC I PEHPGDLVQT Site 2781
Drosophila.melanogaster.MAK ESNRTEDEKL T AWMVAENGNL Site 2782
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GGPAQSYGKP Y RGAARVLPRG Site 2815
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---LPNAFSK P IPYPPRLPIN Site 2511
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d PELMPTFPHH R NKRAAPAAAE Site 2511
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ISSMSTDQTL A SDTDSSLEAS Site 2511
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ISSMSTEQTL A SDTDSSLDAS Site 2508
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 HQGQPNPAIL L EQLDKDKEKQ Site 2512
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p RISEDDSEVS S KRVLSTSLRS Site 2511
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen TPSSQALTET P TSSDWQSTDA Site 2511
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. ELIYKEVMDW E ERSKNGVVKD Site 2510
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a NKLGDLNGAC I SEHPGDLVQT Site 2781
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d VQLQKEANIR S TSMPDSGRPA Site 2511
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein DSDIKTMTYQ G TKRGSQGGDN Site 2511
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. NYTPILRKDS K RKSGMSIKDE Site 2510
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH PNGNALPPLF D FTSHELASHT Site 2512
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD VQSPSTTNTT S STTNNTTTTT Site 2684
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot LKEKENLLIG I KRKRDSIEQG Site 2511
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str TVEEWRAMLF A ELQNYYRTHD Site 2511
Debaryomyces.hansenii.IME2 NLAALKEPLE D EFGIIADISF Site 2748
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati PPLFNWLPGE L DEVPADIVRK Site 2510
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAAAAVQVNG T NIVSGSSSSN Site 2510
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE VAKLKEEIDQ R MRSRRRTNRA Site 2266
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PHVHDFHVDR P LEESLLNPEL Site 2511
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. --------CK E NLDSHMSSSQ Site 2243
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - --SDIPGWFE  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP FFDFDRRKEE L TMLDLKELLY Site 2511
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -FADKRFSQH L ELCNGAQSGP Site 2511
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GGAGAATAAA T ATGAIGATNA Site 2731
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ASEKDKKKML E NKNRFDQTAD Site 2074
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ALLGGYSQAY G TVCHSALGHL Site 2748
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d VSSVASHQGA G SPLSDDSEAD Site 2756
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NNQTNQNNQT N QNNKTSQNNN Site 2511
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d VMREALIHRA Q VNQAALLTYH Site 2918
Ajellomyces.capsulatus.CDK1 ---------- - -----SAYSG  
Dictystelium.discoideum.MAPK3..Extracellular.signa IQSSSELFNL L QQQKQQIHQQ Site 2514
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep --------CK E NLDSHLPPSQ Site 2243
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep MPTFPHHRNK R ATPATSLGTE Site 2511
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac VSSMSTDPTL A SDTDSSLEAA Site 2511
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. WKQHIYKEIS N FSPIARKDSR Site 2511
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri CINPHSAAFK T FIRSTAWHSS Site 2510
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ISSMSTDQTL A SDTDSSLEAS Site 2511
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 KRDYAQSPAG K NNSISTVSFD Site 2724
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen LDIEEWKRQT Y EEMISFEPPV Site 2511
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar HPMSQSSSSG S SNARQEPQPK Site 2854
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. DSLPLLHFEE S ELQGLSSNDI Site 2510
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D HKPNHHAPYD H MRPTEDDIQE Site 2883
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U QTYIPASPTS T VYTGYPLTPP Site 2804
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d LTSSRILPAL D NKKYHCSTKR Site 2511
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PSSQALTEAQ T GQDWQPSDAT Site 2511
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro AGGRLPSSSN F RPASGNIVQP Site 2511
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d KEQQNLNLGI K RKRTEGMDQK Site 2507
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PHIHDFHVDR P LEESLLNPEL Site 2511
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi AKTLYEHYSG G ESHNSSSSKT Site 2511
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ANATAASDTN A GDRGQTNNAA Site 2511
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable VSDSSAFSKP G LPPGGSPQLG Site 2761
Aspergillus.fumigatus.IME2 KIDHASSNRQ W PTPPYEERDW Site 2777
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan PSTSLPQSSM G YSSTSQQPPQ Site 2680
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EWKKHIYKEI L SFSPIAQKDS Site 2515
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S INPQSAAYKN F ASSSVAQASE Site 2510
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma QTYISASPAS T VYTGYPLSPA Site 2918
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ELDDLPKERL K ELIFQETARF Site 2511
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d IQLQKDPGFR N SSYPETGHGK Site 2511
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. PELMPTFPHH R NKRAAPATSE Site 2511
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de LASSTVFPAV E NRRNYNNLRK Site 2511
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S REHTVEQWKE L IYEEVMDYEA Site 2509
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. EWKSNDFSLV P FSLSPLLPFA Site 2514
Candida.glabrata.IME2 RSPNTNEAKA S TYEFAFSNPC Site 2770
Homo.sapiens.MAK..Serine.threonine.protein.kinase. KNLNIVNRAQ P IPSVHGRTDW Site 2778
Schizosaccharomyces.pombe.IME2 ITSLAGSLTL P DSKIIDRSKT Site 2806
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P DFFDFDKRKD E LSIDDLKKML Site 2510
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom RAQGLPAHHP H PHGPPRTTSF Site 2774
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. AASSSGQGQQ A QTPTGKQTDK Site 2243
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d EIQLQKDPGY R GLAFQHPGRG Site 2512
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d PLIPGSHISP T PDGRKQVVQL Site 2510
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH KLIPSHARDA L PVKLDDFVPI Site 2510
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD KSNAKQRKQK Q KWSKAGTQKQ Site 2678
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR PSGRALPQLE M DGPNEVSATG Site 2511
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. STPGLIPRPP A AQPVHGRTDW Site 2796
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act NPADIESLQR E IQMDSPMLLA Site 2795
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. LLIDEWKSLT Y DEVISFVPPP Site 2511
Lachancea.thermotolerans.SKY1 ---------- - --ADIPGWSQ  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a IQATLTPSAM K SSPQIPHKTY Site 2829
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. EWKRVTYKEV L SFKPPRQLGA Site 2515
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U QSYIGASRGS A IYTGYPLSPT Site 2918
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. SGVKLKPEMC D LSASYRKRHH Site 2511
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD NDIIKKKKEE R KKQTNPTKPD Site 2511
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TNATAASDAN T GDRGQTNNAA Site 2511
Drosophila.melanogaster.GSK3H..Putative.glycogen.s GQCNSTYISD D MDEASESDDD Site 2734
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD YKSRQNQTDR K KPEKKAENQR Site 2510
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 ISDNDTTTST N TTVQEQHHSF Site 2760
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a DMELDDLPKE K LKELIFEETA Site 2511
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. SGVRLKPEMC D LLASYQKGHH Site 2511
Cryptococcus.neoformans.IME2 QSAQTLPSFS D IANYAFEGRN Site 2817
Homo.sapiens.HIPK4..Homeodomain.interacting.protei AQGLPPRRSH Q HGPPRGATSF Site 2775
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 ENVDAFYENV D HYDESFANSS Site 2697
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QSYIGSSRGS T IYTGYPLSPT Site 2918
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AAAQQQQQQQ Q QQQMMFNNQQ Site 2716
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep PPHEFTVDRP L HESVVDPSLI Site 2511
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. PQLASSNMSP A PEMKKHNKYK Site 2510
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - -----SYYSG  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. ASKKTDPQKD L KPAPQQCRLP Site 2684
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------R D HNNYNEDNIG Site 2242
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a NPADIESLQR E IQMDSPMLLS Site 2795
Mus.musculus.ICK..Serine.threonine.protein.kinase. STPGLIPRPP A AQPVHGRIDW Site 2796
Saccharomyces.castelli.IME2 EIPHLGPSEE V TNNCSLMNPN Site 2775
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep KEPANPTVAT K RKRAEALEQG Site 2510
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. VRLQPEAGES M RAFGKNNSYG Site 2511
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly TEDELRACTP E MRARLVPEWY Site 2512
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS LDGESTDEDD V VSSSEADLLD Site 2511
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli LKEKENLLIG I KRKRDSIEQG Site 2510
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho RKGSQITQQS T NQSRNPATTN Site 2510
Homo.sapiens.HIPK2..Homeodomain.interacting.protei QTYISASPAS T VYTGYPLSPA Site 2918
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 GDKKKSNQVG G TKRSFTTFSM Site 2717
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQMMFNQ Site 2670
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TSGNHYSGGA G GTSSSLHKPG Site 2512
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de IQLQKEASLR S SSMPDSGRPA Site 2511
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d IQLQKDPGFR N SSYPETGHGK Site 2511
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EWKKHIYKEI L SFSPIARKDS Site 2515
Candida.albicans.SSN3..Serine.threonine.protein.ki QQLQSHGANS T YKRSGIDDLP Site 2683
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF EPPSGVGGQK A PVSHRTDKYV Site 2727
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SSSSTAPHDT P EPSTSATASS Site 2511
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara WKRLSFKEVR S FVPFPRRDSK Site 2511
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SSTSLHQQST S DLKSPSFHEN Site 2754
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U FPSHSYITAS P AYAGFPMSPT Site 2918
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d DDDLKETGFH L TTTNQGASAA Site 2513
Candida.dubliniensis.IME2 DLKKKQSKAA G TKRSFTTFSL Site 2716
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ISSMSTEHTL A SDTDSSLDAS Site 2511
Aspergillus.niger.IME2 RQWPTPPYED G DWAKPAPAKF Site 2788
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge LDIEEWKRLT Y EEVTCFVPPP Site 2511
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d NVDQNQEKQE G GDGHCEGKNL Site 2777
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. VRLQPEAGES M RAFGKNNSYG Site 2511
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 TFFTEGFHDS F DELSLASTLR Site 2772
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. MDVEQNVDSW R EHIFRELTDY Site 2511
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P HQRSVLAARG L DIDNFTPMPK Site 2512
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - --VSVKPRVL  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. RPLPTLEMDG P MGTGEVSTTS Site 2511
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. EWKRVTYKEV L SFKPPRQLGA Site 2515
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 AVPRISEECS T SVQENHDHSF Site 2749
Debaryomyces.hansenii.SKY1 ---------- - --PVGGSGED  
Saccharomyces.cerevisiae.IME2 FLIPTLKKSR E KFEPHLSNSN Site 2733
Schizosaccharomyces.japonicus.b.IME2 NQETPIRNAR I QSNASRSPSF Site 2807
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un --------KD S VDSHRPSGQK Site 2508
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a IQATLTPSAM K SSPQIPHQTY Site 2829
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep --------YK D NLNSHLPSNQ Site 2243
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST TELGHVPLVE R PAIEERLKHF Site 2511
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk LPLEEWKRLT H EELTSFEPLV Site 2511
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de MDPNQEKQEG G DGDCEGKNLK Site 2784
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act IYKEVLEWEE R TKNGVIRGQP Site 2511
Candida.albicans.IME2 DLKKKSSKVA G TKRSFTTFSL Site 2716
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- A CSKQEHFTHI Site 2241
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - --RDPLLMPT  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. LLIDEWKSLT Y DEVISFVPPP Site 2511
Kluyveromyces.lactis.IME2 LLDPSEHASQ N LIQTSNSHNH Site 2783
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina NPADIESLQR E IQMDSPMLLA Site 2795
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ISSMSTDQTL A SDTDSSLEAS Site 2511
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. EWKELTYQEV L SFKPPEPPKP Site 2515
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 HQGQPNPAIL L EQLDKDKEKQ Site 2512
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. EWKELTYQEV L SFKPLEPSQL Site 2515
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d -----AQIKR K ARNEGRNRRR Site 2511
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME GSSASTGFVL N AGITQRQLAM Site 2685
Neurospora.crassa.IME2 YKWPTPPYND E GDWAASASAS Site 2801
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar LMPTFPHHRN K RAASTSTGTE Site 2511
Ashbya.gossypii.IME2 TIPQHDILPP A QVRHEPTPNH Site 2790
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi AKTLYERYNC G EGQDSSSSKT Site 2511
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LEFDENVELG H LSPDELSSVK Site 2511
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace RCHTRKRTTL K GRTLRAHTSR Site 2759
Schizosaccharomyces.pombe.b.IME2 STPNPAEVQN I CNDHAKFETS Site 2744
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a DMELDDLPKE K LKELIFEETA Site 2510
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom FPPHSYIAAS P AYTGFPLSPT Site 2918
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas TGRQDTSRMS T SQIPGRVASS Site 2511
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac IYKEVMDLEE R TKNGVIRGQP Site 2520
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable NAQPGLQEDQ L EPPAGQEAPL Site 2776
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 PVYPGLQTNS F RDRKIGAGAI Site 2787
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil RILAAAAAAA A AVSGNNASDE Site 2511
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- E DLLDRDQRRE Site 2240
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly HMRPVLASKG L DIDNFTPMNK Site 2512
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk KLIPSHARDA L PVKLDDFVPI Site 2510
Species Residue at Site 4905
in 'msaprobs'
muscle

The residue for every species at site 4905 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo NPQSAAFKSF I SSTVAQPSEM Site 2510
Scheffersomyces.stipitis.SKY1 ---------- - --PVGGSGED  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 01:05, December 7th 2019
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