cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4904 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4904 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4904 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4904 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 DFCVTSLADT L GVPGLTLKSD Site 2817
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge FDFEQHALTE E QMKELIYREA Site 2509
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 PLNPNQLKGA S SEGTFSFSGS Site 2510
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ SRAAVARGAR D EPLHRSLELL Site 2713
Chlamydomonas.reinhardtii.LF4 KYKANVGKTN S KYISPYSLRQ Site 2806
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g AILPPHVYES L DVDINNFEPI Site 2510
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 THQGQPNPAI L LEQLDKDKEK Site 2087
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ANDEQNAKNA A QDRNSNKSSK Site 2718
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho GPSTSQPQSS M GYSATSQQPP Site 2679
Schizosaccharomyces.octosporus.b.IME2 SCQAYPNFMV Y NPSSPVRINR Site 2787
Candida.albicans.MAPK3..Extracellular.signal.regul EDFFDFDKMK D QLTIEDLKKL Site 2509
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 VSNSPNASHV L NAGIGGKDIS Site 2510
Suberites.domuncula.JNK..Stress.activated.protein. KRYDHALDEQ S IPLDQWKTRI Site 2264
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei TQSYIGSSRG S TIYTGYPLSP Site 2917
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar QLSSSNVLPA L DSKKYFCKTR Site 2510
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ENDDISRDAL K SLIFEETLKF Site 2507
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca PMDHATHSKA Q GSIDPHTRGS Site 2510
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 LESNASQMLS Q PFSMGLQSQN Site 2723
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. SSNPNQTTFY R QNKVVVPQSS Site 2690
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ---DAENVDD  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d KEIQLQKDPG Y RGLAFQQPGR Site 2511
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. LIGTQQFSLV Q NNFHWYTTVL Site 2512
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET DISSMSTDQT L ASDTDSSLET Site 2510
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 IYNINVTTLV S GPPLSDDSGA Site 2748
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U DISSMSTDQT L ASDTDSSLET Site 2510
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. DEWKQHIYKE I VNFSPIARKD Site 2514
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo INPQSAAFKS F ISSTVAQPSE Site 2509
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar PSLAAIDLHN T SLASQQKTTN Site 2762
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. DASSMSTDPT L PSDTDSSLET Site 2510
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GPTQSSAYGK L YRGPTRVPPR Site 2816
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. VNKKTDTQKD I KPHLKHYHLP Site 2684
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. GNPLPAHLYQ F TPDEVEAMTE Site 2509
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G NKDLPEDLFR F LPSEIEVMSE Site 2509
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 THQGQPNPAI L LEQLDKDKEK Site 2087
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 GEAGKSTRRH Y ESVVKGIDNL Site 2698
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO SQFGPLSPAQ V AASKHAAHFA Site 2916
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl INPQSAAFKS F ISSTVAQPSE Site 2509
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 QLTGSSILPA L DNKKYYCDTK Site 2510
Homo.sapiens.HIPK3..Homeodomain.interacting.protei IFPPHSYIAA S PAYTGFPLSP Site 2917
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O GDDDLKETGF H LTTTNQGASA Site 2512
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d ANKGGQNGIG F TRAARTRMPN Site 2908
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O GDDDLKETGF H LTTTNQGASA Site 2512
Naegleria.gruberi.LF4 QNNVHASLSN S NKNEPIEKQQ Site 2735
Saccharomyces.bayanus.IME2 NFLIPTLEKS Q EKFETHLSNQ Site 2732
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a SLEQWKRLTF T EILTFQPAPA Site 2510
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQQQQQQIQ S QPEPIQVDNV Site 2510
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d LRYNGWKHSR S RSSQPDEVIF Site 2887
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RAALGGYSQA Y GTVCRSALGR Site 2744
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific AASNLAMMCN S GRKLDVSECV Site 2510
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 ATRQWPTPPY D DGDWMNPAST Site 2784
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se CINPQSAAYK N FASSSVAQAS Site 2509
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. AKNLNIVNRT Q PVPSVHGRTD Site 2777
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. DISSMSTDQT L ASDTDSSLEA Site 2510
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. KSHELKGVPA E ILVKLVPEHA Site 2511
Penicillium.marneffei.IME2 SSRQWPTPPY G EQEWASSVAN Site 2787
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen PEADPYDQSF E SRDLEIEEWK Site 2510
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a DNKLGDLNGA C IPEHPGDLVQ Site 2780
Drosophila.melanogaster.MAK DESNRTEDEK L TAWMVAENGN Site 2781
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de WGGPAQSYGK P YRGAARVLPR Site 2814
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ----LPNAFS K PIPYPPRLPI Site 2510
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d EPELMPTFPH H RNKRAAPAAA Site 2510
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin DISSMSTDQT L ASDTDSSLEA Site 2510
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a DISSMSTEQT L ASDTDSSLDA Site 2507
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 THQGQPNPAI L LEQLDKDKEK Site 2087
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p RRISEDDSEV S SKRVLSTSLR Site 2510
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LTPSSQALTE T PTSSDWQSTD Site 2510
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. KELIYKEVMD W EERSKNGVVK Site 2509
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a ENKLGDLNGA C ISEHPGDLVQ Site 2780
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d EVQLQKEANI R STSMPDSGRP Site 2510
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein EDSDIKTMTY Q GTKRGSQGGD Site 2510
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. INYTPILRKD S KRKSGMSIKD Site 2509
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH LPNGNALPPL F DFTSHELASH Site 2511
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD PVQSPSTTNT T SSTTNNTTTT Site 2683
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot ALKEKENLLI G IKRKRDSIEQ Site 2510
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str HTVEEWRAML F AELQNYYRTH Site 2510
Debaryomyces.hansenii.IME2 NNLAALKEPL E DEFGIIADIS Site 2747
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati LPPLFNWLPG E LDEVPADIVR Site 2509
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin AAAAAAVQVN G TNIVSGSSSS Site 2509
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE SVAKLKEEID Q RMRSRRRTNR Site 2265
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PPHVHDFHVD R PLEESLLNPE Site 2510
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------C K ENLDSHMSSS Site 2242
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ---SDIPGWF  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP DFFDFDRRKE E LTMLDLKELL Site 2510
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --FADKRFSQ H LELCNGAQSG Site 2510
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GGGAGAATAA A TATGAIGATN Site 2730
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas YASEKDKKKM L ENKNRFDQTA Site 2073
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. RALLGGYSQA Y GTVCHSALGH Site 2747
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d HVSSVASHQG A GSPLSDDSEA Site 2755
Dictyostelium.discoideum.CDK10..Probable.cyclin.de QNNQTNQNNQ T NQNNKTSQNN Site 2510
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d HVMREALIHR A QVNQAALLTY Site 2917
Ajellomyces.capsulatus.CDK1 ---------- - ------SAYS  
Dictystelium.discoideum.MAPK3..Extracellular.signa RIQSSSELFN L LQQQKQQIHQ Site 2513
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------C K ENLDSHLPPS Site 2242
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep LMPTFPHHRN K RATPATSLGT Site 2510
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac DVSSMSTDPT L ASDTDSSLEA Site 2510
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. EWKQHIYKEI S NFSPIARKDS Site 2510
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LCINPHSAAF K TFIRSTAWHS Site 2509
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha DISSMSTDQT L ASDTDSSLEA Site 2510
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 FKRDYAQSPA G KNNSISTVSF Site 2723
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen ELDIEEWKRQ T YEEMISFEPP Site 2510
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar IHPMSQSSSS G SSNARQEPQP Site 2853
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. IDSLPLLHFE E SELQGLSSND Site 2509
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D HHKPNHHAPY D HMRPTEDDIQ Site 2882
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U HQTYIPASPT S TVYTGYPLTP Site 2803
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d QLTSSRILPA L DNKKYHCSTK Site 2510
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen NPSSQALTEA Q TGQDWQPSDA Site 2510
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro MAGGRLPSSS N FRPASGNIVQ Site 2510
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d LKEQQNLNLG I KRKRTEGMDQ Site 2506
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PPHIHDFHVD R PLEESLLNPE Site 2510
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi AAKTLYEHYS G GESHNSSSSK Site 2510
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen PANATAASDT N AGDRGQTNNA Site 2510
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable LVSDSSAFSK P GLPPGGSPQL Site 2760
Aspergillus.fumigatus.IME2 EKIDHASSNR Q WPTPPYEERD Site 2776
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan GPSTSLPQSS M GYSSTSQQPP Site 2679
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EEWKKHIYKE I LSFSPIAQKD Site 2514
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S CINPQSAAYK N FASSSVAQAS Site 2509
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma HQTYISASPA S TVYTGYPLSP Site 2917
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina MELDDLPKER L KELIFQETAR Site 2510
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d EIQLQKDPGF R NSSYPETGHG Site 2510
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. EPELMPTFPH H RNKRAAPATS Site 2510
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de QLASSTVFPA V ENRRNYNNLR Site 2510
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EREHTVEQWK E LIYEEVMDYE Site 2508
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. SEWKSNDFSL V PFSLSPLLPF Site 2513
Candida.glabrata.IME2 LRSPNTNEAK A STYEFAFSNP Site 2769
Homo.sapiens.MAK..Serine.threonine.protein.kinase. AKNLNIVNRA Q PIPSVHGRTD Site 2777
Schizosaccharomyces.pombe.IME2 GITSLAGSLT L PDSKIIDRSK Site 2805
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P EDFFDFDKRK D ELSIDDLKKM Site 2509
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom SRAQGLPAHH P HPHGPPRTTS Site 2773
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. QAASSSGQGQ Q AQTPTGKQTD Site 2242
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d KEIQLQKDPG Y RGLAFQHPGR Site 2511
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d LPLIPGSHIS P TPDGRKQVVQ Site 2509
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH QKLIPSHARD A LPVKLDDFVP Site 2509
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD IKSNAKQRKQ K QKWSKAGTQK Site 2677
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR LPSGRALPQL E MDGPNEVSAT Site 2510
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. RSTPGLIPRP P AAQPVHGRTD Site 2795
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act MNPADIESLQ R EIQMDSPMLL Site 2794
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. DLLIDEWKSL T YDEVISFVPP Site 2510
Lachancea.thermotolerans.SKY1 ---------- - ---ADIPGWS  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a SIQATLTPSA M KSSPQIPHKT Site 2828
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. EEWKRVTYKE V LSFKPPRQLG Site 2514
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U AQSYIGASRG S AIYTGYPLSP Site 2917
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. VSGVKLKPEM C DLSASYRKRH Site 2510
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD YNDIIKKKKE E RKKQTNPTKP Site 2510
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen PTNATAASDA N TGDRGQTNNA Site 2510
Drosophila.melanogaster.GSK3H..Putative.glycogen.s GGQCNSTYIS D DMDEASESDD Site 2733
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD NYKSRQNQTD R KKPEKKAENQ Site 2509
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 LISDNDTTTS T NTTVQEQHHS Site 2759
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a FDMELDDLPK E KLKELIFEET Site 2510
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. VSGVRLKPEM C DLLASYQKGH Site 2510
Cryptococcus.neoformans.IME2 QQSAQTLPSF S DIANYAFEGR Site 2816
Homo.sapiens.HIPK4..Homeodomain.interacting.protei RAQGLPPRRS H QHGPPRGATS Site 2774
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 KENVDAFYEN V DHYDESFANS Site 2696
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom TQSYIGSSRG S TIYTGYPLSP Site 2917
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A AAAAQQQQQQ Q QQQQMMFNNQ Site 2715
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep QPPHEFTVDR P LHESVVDPSL Site 2510
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. LPQLASSNMS P APEMKKHNKY Site 2509
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ------SYYS  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. PASKKTDPQK D LKPAPQQCRL Site 2683
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- R DHNNYNEDNI Site 2241
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a MNPADIESLQ R EIQMDSPMLL Site 2794
Mus.musculus.ICK..Serine.threonine.protein.kinase. RSTPGLIPRP P AAQPVHGRID Site 2795
Saccharomyces.castelli.IME2 FEIPHLGPSE E VTNNCSLMNP Site 2774
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep LKEPANPTVA T KRKRAEALEQ Site 2509
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. NVRLQPEAGE S MRAFGKNNSY Site 2510
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly FTEDELRACT P EMRARLVPEW Site 2511
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS LLDGESTDED D VVSSSEADLL Site 2510
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli ALKEKENLLI G IKRKRDSIEQ Site 2509
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho RRKGSQITQQ S TNQSRNPATT Site 2509
Homo.sapiens.HIPK2..Homeodomain.interacting.protei HQTYISASPA S TVYTGYPLSP Site 2917
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 SGDKKKSNQV G GTKRSFTTFS Site 2716
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QQQQQQQQQQ Q QQQQQQMMFN Site 2669
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G STSGNHYSGG A GGTSSSLHKP Site 2511
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de EIQLQKEASL R SSSMPDSGRP Site 2510
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d EIQLQKDPGF R NSSYPETGHG Site 2510
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EEWKKHIYKE I LSFSPIARKD Site 2514
Candida.albicans.SSN3..Serine.threonine.protein.ki SQQLQSHGAN S TYKRSGIDDL Site 2682
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF MEPPSGVGGQ K APVSHRTDKY Site 2726
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA NSSSSTAPHD T PEPSTSATAS Site 2510
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara EWKRLSFKEV R SFVPFPRRDS Site 2510
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de PSSTSLHQQS T SDLKSPSFHE Site 2753
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U IFPSHSYITA S PAYAGFPMSP Site 2917
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d GDDDLKETGF H LTTTNQGASA Site 2512
Candida.dubliniensis.IME2 SDLKKKQSKA A GTKRSFTTFS Site 2715
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a DISSMSTEHT L ASDTDSSLDA Site 2510
Aspergillus.niger.IME2 SRQWPTPPYE D GDWAKPAPAK Site 2787
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge ELDIEEWKRL T YEEVTCFVPP Site 2510
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d LNVDQNQEKQ E GGDGHCEGKN Site 2776
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. NVRLQPEAGE S MRAFGKNNSY Site 2510
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 DTFFTEGFHD S FDELSLASTL Site 2771
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. NMDVEQNVDS W REHIFRELTD Site 2510
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P PHQRSVLAAR G LDIDNFTPMP Site 2511
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ---VSVKPRV  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. GRPLPTLEMD G PMGTGEVSTT Site 2510
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. DEWKRVTYKE V LSFKPPRQLG Site 2514
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 FAVPRISEEC S TSVQENHDHS Site 2748
Debaryomyces.hansenii.SKY1 ---------- - ---PVGGSGE  
Saccharomyces.cerevisiae.IME2 NFLIPTLKKS R EKFEPHLSNS Site 2732
Schizosaccharomyces.japonicus.b.IME2 SNQETPIRNA R IQSNASRSPS Site 2806
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------K D SVDSHRPSGQ Site 2243
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a SIQATLTPSA M KSSPQIPHQT Site 2828
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------Y K DNLNSHLPSN Site 2242
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST ETELGHVPLV E RPAIEERLKH Site 2510
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk NLPLEEWKRL T HEELTSFEPL Site 2510
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de SMDPNQEKQE G GDGDCEGKNL Site 2783
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act LIYKEVLEWE E RTKNGVIRGQ Site 2510
Candida.albicans.IME2 HDLKKKSSKV A GTKRSFTTFS Site 2715
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ACSKQEHFTH  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ---RDPLLMP  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. DLLIDEWKSL T YDEVISFVPP Site 2510
Kluyveromyces.lactis.IME2 CLLDPSEHAS Q NLIQTSNSHN Site 2782
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina MNPADIESLQ R EIQMDSPMLL Site 2794
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. DISSMSTDQT L ASDTDSSLEA Site 2510
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. EEWKELTYQE V LSFKPPEPPK Site 2514
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 THQGQPNPAI L LEQLDKDKEK Site 2087
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. EEWKELTYQE V LSFKPLEPSQ Site 2514
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ------AQIK R KARNEGRNRR Site 2510
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME GGSSASTGFV L NAGITQRQLA Site 2684
Neurospora.crassa.IME2 EYKWPTPPYN D EGDWAASASA Site 2800
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ELMPTFPHHR N KRAASTSTGT Site 2510
Ashbya.gossypii.IME2 TTIPQHDILP P AQVRHEPTPN Site 2789
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi TAKTLYERYN C GEGQDSSSSK Site 2510
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p LLEFDENVEL G HLSPDELSSV Site 2510
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace HRCHTRKRTT L KGRTLRAHTS Site 2758
Schizosaccharomyces.pombe.b.IME2 YSTPNPAEVQ N ICNDHAKFET Site 2743
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a FDMELDDLPK E KLKELIFEET Site 2509
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom IFPPHSYIAA S PAYTGFPLSP Site 2917
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas LTGRQDTSRM S TSQIPGRVAS Site 2510
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac LIYKEVMDLE E RTKNGVIRGQ Site 2519
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ANAQPGLQED Q LEPPAGQEAP Site 2775
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 CPVYPGLQTN S FRDRKIGAGA Site 2786
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil RRILAAAAAA A AAVSGNNASD Site 2510
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - EDLLDRDQRR  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly SHMRPVLASK G LDIDNFTPMN Site 2511
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk QKLIPSHARD A LPVKLDDFVP Site 2509
Species Residue at Site 4904
in 'msaprobs'
muscle

The residue for every species at site 4904 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo INPQSAAFKS F ISSTVAQPSE Site 2509
Scheffersomyces.stipitis.SKY1 ---------- - ---PVGGSGE  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 16:23, October 23rd 2019
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