cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4899 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4899 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4899 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4899 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 EHDFPDFCVT S LADTLGVPGL Site 2812
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge MTPFSFDFEQ H ALTEEQMKEL Site 2504
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 DEAMNPLNPN Q LKGASSEGTF Site 2505
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ RATSLSRAAV A RGARDEPLHR Site 2708
Chlamydomonas.reinhardtii.LF4 GVGVNKYKAN V GKTNSKYISP Site 2801
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g PNLNKAILPP H VYESLDVDIN Site 2505
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 MLKQKTHQGQ P NPAILLEQLD Site 2074
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 NAQPTANDEQ N AKNAAQDRNS Site 2713
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho AYPNPGPSTS Q PQSSMGYSAT Site 2674
Schizosaccharomyces.octosporus.b.IME2 ASRSISCQAY P NFMVYNPSSP Site 2782
Candida.albicans.MAPK3..Extracellular.signal.regul SDKIPEDFFD F DKMKDQLTIE Site 2504
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 SKQNVVSNSP N ASHVLNAGIG Site 2505
Suberites.domuncula.JNK..Stress.activated.protein. HAPPPKRYDH A LDEQSIPLDQ Site 2259
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei QHQFATQSYI G SSRGSTIYTG Site 2912
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar FQYLPQLSSS N VLPALDSKKY Site 2505
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM FRINMENDDI S RDALKSLIFE Site 2502
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca DNADAPMDHA T HSKAQGSIDP Site 2505
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 LNNKRLESNA S QMLSQPFSMG Site 2718
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. TTTTSSSNPN Q TTFYRQNKVV Site 2685
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - --------DA  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d SIFSLKEIQL Q KDPGYRGLAF Site 2506
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. WYTTVLIGTQ Q FSLVQNNFHW Site 2507
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SSSINDISSM S TDQTLASDTD Site 2505
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 HSPSGIYNIN V TTLVSGPPLS Site 2743
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SSSINDISSM S TDQTLASDTD Site 2505
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. EKLTVDEWKQ H IYKEIVNFSP Site 2509
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo RVPLCINPQS A AFKSFISSTV Site 2504
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar SESRVPSLAA I DLHNTSLASQ Site 2757
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SSSSGDASSM S TDPTLPSDTD Site 2505
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d GLHWGGPTQS S AYGKLYRGPT Site 2811
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LKCAAVNKKT D TQKDIKPHLK Site 2679
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. TKLPSGNPLP A HLYQFTPDEV Site 2504
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G TKLPNNKDLP E DLFRFLPSEI Site 2504
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 MLKQKTHQGQ P NPAILLEQLD Site 2074
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 PRNSPGEAGK S TRRHYESVVK Site 2693
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO IPTQYSQFGP L SPAQVAASKH Site 2911
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl RVPLCINPQS A AFKSFISSTV Site 2504
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 LQYLPQLTGS S ILPALDNKKY Site 2505
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TQYKPIFPPH S YIAASPAYTG Site 2912
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O GYSQLGDDDL K ETGFHLTTTN Site 2507
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d YPDQLANKGG Q NGIGFTRAAR Site 2903
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O GYSQLGDDDL K ETGFHLTTTN Site 2507
Naegleria.gruberi.LF4 APPIFQNNVH A SLSNSNKNEP Site 2730
Saccharomyces.bayanus.IME2 DFTPRNFLIP T LEKSQEKFET Site 2727
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a DEADQSLEQW K RLTFTEILTF Site 2464
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QKQQQQQQQQ Q QQIQSQPEPI Site 2505
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d PGSSLLRYNG W KHSRSRSSQP Site 2882
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a AQGAARAALG G YSQAYGTVCR Site 2739
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific NSIARAASNL A MMCNSGRKLD Site 2505
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 KSATSATRQW P TPPYDDGDWM Site 2779
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se YGVALCINPQ S AAYKNFASSS Site 2504
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. TYNPTAKNLN I VNRTQPVPSV Site 2772
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SSSVNDISSM S TDQTLASDTD Site 2505
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. PLFNFKSHEL K GVPAEILVKL Site 2506
Penicillium.marneffei.IME2 IPEDTSSRQW P TPPYGEQEWA Site 2782
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---DEPEADP Y DQSFESRDLE Site 2505
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a PEDLPDNKLG D LNGACIPEHP Site 2775
Drosophila.melanogaster.MAK SSFPWDESNR T EDEKLTAWMV Site 2776
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GTTLQWGGPA Q SYGKPYRGAA Site 2809
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------L P NAFSKPIPYP Site 2239
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ----CEPELM P TFPHHRNKRA Site 2505
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SSSVNDISSM S TDQTLASDTD Site 2505
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a SSSINDISSM S TEQTLASDTD Site 2502
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 MLKQKTHQGQ P NPAILLEQLD Site 2074
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p IHYPERRISE D DSEVSSKRVL Site 2505
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen AGTTTLTPSS Q ALTETPTSSD Site 2505
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. AIEEWKELIY K EVMDWEERSK Site 2504
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a PEDLPENKLG D LNGACISEHP Site 2775
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d IFALKEVQLQ K EANIRSTSMP Site 2505
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein RRISCEDSDI K TMTYQGTKRG Site 2505
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. TYEEVINYTP I LRKDSKRKSG Site 2504
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH --RTRLPNGN A LPPLFDFTSH Site 2506
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD TPNSIPVQSP S TTNTTSSTTN Site 2678
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot NSSTEALKEK E NLLIGIKRKR Site 2505
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str LVDGEHTVEE W RAMLFAELQN Site 2505
Debaryomyces.hansenii.IME2 EQYIPNNLAA L KEPLEDEFGI Site 2742
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati PNGRSLPPLF N WLPGELDEVP Site 2504
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin ILAAAAAAAA A VQVNGTNIVS Site 2504
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE TQNRPSVAKL K EEIDQRMRSR Site 2260
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de KAHPGPPHVH D FHVDRPLEES Site 2505
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ---CKENLDS  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - --------SD  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP APLEDDFFDF D RRKEELTMLD Site 2505
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U -------FAD K RFSQHLELCN Site 2243
Drosophila.melanogaster.GSK3..Protein.kinase.shagg GGAGGGGGAG A ATAAATATGA Site 2725
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas DWTCVYASEK D KKKMLENKNR Site 2067
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. AQGGARALLG G YSQAYGTVCH Site 2742
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d AAIDLHVSSV A SHQGAGSPLS Site 2750
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NNQTNQNNQT N QNNQTNQNNK Site 2505
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d SFFVRHVMRE A LIHRAQVNQA Site 2912
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa NFNLSRIQSS S ELFNLLQQQK Site 2508
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ---CKENLDS  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -CEPELMPTF P HHRNKRATPA Site 2505
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SSSVNDVSSM S TDPTLASDTD Site 2505
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. KLSVDEWKQH I YKEISNFSPI Site 2505
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri GKRPPLCINP H SAAFKTFIRS Site 2504
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SSSANDISSM S TDQTLASDTD Site 2505
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 RSINEFKRDY A QSPAGKNNSI Site 2718
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen SFESRELDIE E WKRQTYEEMI Site 2505
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar FSEVRIHPMS Q SSSSGSSNAR Site 2848
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. SNLSLIDSLP L LHFEESELQG Site 2504
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D ACRHRHHKPN H HAPYDHMRPT Site 2877
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U QAQFAHQTYI P ASPTSTVYTG Site 2798
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d LQYLPQLTSS R ILPALDNKKY Site 2505
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen LTTSYNPSSQ A LTEAQTGQDW Site 2505
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro SLPQSMAGGR L PSSSNFRPAS Site 2505
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d CSIEALKEQQ N LNLGIKRKRT Site 2501
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d KAHPGPPHIH D FHVDRPLEES Site 2505
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi NSILKAAKTL Y EHYSGGESHN Site 2505
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen AAASPPANAT A ASDTNAGDRG Site 2505
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable RFTSSLVSDS S AFSKPGLPPG Site 2755
Aspergillus.fumigatus.IME2 PCRRDEKIDH A SSNRQWPTPP Site 2771
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan AYQNPGPSTS L PQSSMGYSST Site 2674
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha EKLSIEEWKK H IYKEILSFSP Site 2509
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S YGVALCINPQ S AAYKNFASSS Site 2504
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PAQFAHQTYI S ASPASTVYTG Site 2912
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina PFTFAMELDD L PKERLKELIF Site 2505
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d IFSLKEIQLQ K DPGFRNSSYP Site 2505
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ----CEPELM P TFPHHRNKRA Site 2505
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de PGYLPQLASS T VFPAVENRRN Site 2505
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S DHSVDEREHT V EQWKELIYEE Site 2503
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. VELETSEWKS N DFSLVPFSLS Site 2508
Candida.glabrata.IME2 ENNSELRSPN T NEAKASTYEF Site 2764
Homo.sapiens.MAK..Serine.threonine.protein.kinase. TYNPTAKNLN I VNRAQPIPSV Site 2772
Schizosaccharomyces.pombe.IME2 DFPDFGITSL A GSLTLPDSKI Site 2800
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P SEKIPEDFFD F DKRKDELSID Site 2504
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom EGIRGSRAQG L PAHHPHPHGP Site 2768
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. QKAAQQAASS S GQGQQAQTPT Site 2237
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d SIFSLKEIQL Q KDPGYRGLAF Site 2506
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d QQNQLLPLIP G SHISPTPDGR Site 2504
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH RPDLNQKLIP S HARDALPVKL Site 2504
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD LSMPEIKSNA K QRKQKQKWSK Site 2672
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---ARLPSGR A LPQLEMDGPN Site 2505
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. FHTQPRSTPG L IPRPPAAQPV Site 2790
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act LEGHGMNPAD I ESLQREIQMD Site 2789
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. SFESRDLLID E WKSLTYDEVI Site 2505
Lachancea.thermotolerans.SKY1 ---------- - --------AD  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a GSPLKSIQAT L TPSAMKSSPQ Site 2823
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. VDRTLEEWKR V TYKEVLSFKP Site 2509
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U PHQFAAQSYI G ASRGSAIYTG Site 2912
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ESLFAVSGVK L KPEMCDLSAS Site 2505
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD YRNRLYNDII K KKKEERKKQT Site 2505
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen AAASTPTNAT A ASDANTGDRG Site 2505
Drosophila.melanogaster.GSK3H..Putative.glycogen.s YDYDDGGQCN S TYISDDMDEA Site 2728
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD MPDFPNYKSR Q NQTDRKKPEK Site 2504
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 GFMVPLISDN D TTTSTNTTVQ Site 2754
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a EAPFKFDMEL D DLPKEKLKEL Site 2505
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ESLFTVSGVR L KPEMCDLLAS Site 2505
Cryptococcus.neoformans.IME2 ASLQYQQSAQ T LPSFSDIANY Site 2811
Homo.sapiens.HIPK4..Homeodomain.interacting.protei SVRGPRAQGL P PRRSHQHGPP Site 2769
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 SSAVGKENVD A FYENVDHYDE Site 2691
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom QHQFATQSYI G SSRGSTIYTG Site 2912
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QAAAAAAAAQ Q QQQQQQQQQM Site 2710
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep SRQRMQPPHE F TVDRPLHESV Site 2505
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. QGLQYLPQLA S SNMSPAPEMK Site 2504
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. PLKCIPASKK T DPQKDLKPAP Site 2678
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----RDHNNY  
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a LEGHGMNPAD I ESLQREIQMD Site 2789
Mus.musculus.ICK..Serine.threonine.protein.kinase. FHTQPRSTPG L IPRPPAAQPV Site 2790
Saccharomyces.castelli.IME2 VAPRTFEIPH L GPSEEVTNNC Site 2769
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep CPVEALKEPA N PTVATKRKRA Site 2504
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. IFTVPNVRLQ P EAGESMRAFG Site 2505
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly PPLFDFTEDE L RACTPEMRAR Site 2506
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS --NTYLLDGE S TDEDDVVSSS Site 2505
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli NSSTEALKEK E NLLIGIKRKR Site 2504
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho YLAPPRRKGS Q ITQQSTNQSR Site 2504
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PAQFAHQTYI S ASPASTVYTG Site 2912
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 GVNGTSGDKK K SNQVGGTKRS Site 2711
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin DFHHQQQQQQ Q QQQQQQQQQQ Site 2526
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G DHAHSSTSGN H YSGGAGGTSS Site 2506
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de IFALKEIQLQ K EASLRSSSMP Site 2505
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d IFSLKEIQLQ K DPGFRNSSYP Site 2505
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA EKLSIEEWKK H IYKEILSFSP Site 2509
Candida.albicans.SSN3..Serine.threonine.protein.ki QQQIHSQQLQ S HGANSTYKRS Site 2677
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF SVRERMEPPS G VGGQKAPVSH Site 2721
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA PHVSQNSSSS T APHDTPEPST Site 2505
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara TLPLEEWKRL S FKEVRSFVPF Site 2505
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de TNEQHPSSTS L HQQSTSDLKS Site 2748
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TQFKPIFPSH S YITASPAYAG Site 2912
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d GYSQLGDDDL K ETGFHLTTTN Site 2507
Candida.dubliniensis.IME2 AGNGTSDLKK K QSKAAGTKRS Site 2710
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a SSSINDISSM S TEHTLASDTD Site 2505
Aspergillus.niger.IME2 TDANTSRQWP T PPYEDGDWAK Site 2782
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge SFESRELDIE E WKRLTYEEVT Site 2505
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d KIPTLLNVDQ N QEKQEGGDGH Site 2771
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. IFTVPNVRLQ P EAGESMRAFG Site 2505
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 DLLNPDTFFT E GFHDSFDELS Site 2766
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. LPYDHNMDVE Q NVDSWREHIF Site 2505
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P TRHVPPHQRS V LAARGLDIDN Site 2506
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - --------VS  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ARLPSGRPLP T LEMDGPMGTG Site 2505
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. VDRTLDEWKR V TYKEVLSFKP Site 2509
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 RIPRSFAVPR I SEECSTSVQE Site 2743
Debaryomyces.hansenii.SKY1 ---------- - --------PV  
Saccharomyces.cerevisiae.IME2 DFTPRNFLIP T LKKSREKFEP Site 2727
Schizosaccharomyces.japonicus.b.IME2 TPGFPSNQET P IRNARIQSNA Site 2801
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ---KDSVDSH  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a GSPLKSIQAT L TPSAMKSSPQ Site 2823
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ---YKDNLNS  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST FDFDVETELG H VPLVERPAIE Site 2505
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk SFDNVNLPLE E WKRLTHEELT Site 2505
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de IPTLLSMDPN Q EKQEGGDGDC Site 2778
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EEWKELIYKE V LEWEERTKNG Site 2505
Candida.albicans.IME2 AGNEAHDLKK K SSKVAGTKRS Site 2710
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - -----ACSKQ  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - --------RD  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. SFESRDLLID E WKSLTYDEVI Site 2505
Kluyveromyces.lactis.IME2 QRVLDCLLDP S EHASQNLIQT Site 2777
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina LEGHGMNPAD I ESLQREIQMD Site 2789
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SSAVNDISSM S TDQTLASDTD Site 2505
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. KERTLEEWKE L TYQEVLSFKP Site 2509
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 MLKQKTHQGQ P NPAILLEQLD Site 2074
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. KERTLEEWKE L TYQEVLSFKP Site 2509
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - AQIKRKARNE  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME KSHGAGGSSA S TGFVLNAGIT Site 2679
Neurospora.crassa.IME2 KKRSSEYKWP T PPYNDEGDWA Site 2795
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar --CEPELMPT F PHHRNKRAAS Site 2505
Ashbya.gossypii.IME2 FIMEPTTIPQ H DILPPAQVRH Site 2784
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi NSILKTAKTL Y ERYNCGEGQD Site 2505
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p TTDLKLLEFD E NVELGHLSPD Site 2505
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace HRCHIHRCHT R KRTTLKGRTL Site 2753
Schizosaccharomyces.pombe.b.IME2 TSVLEYSTPN P AEVQNICNDH Site 2738
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a EAPFKFDMEL D DLPKEKLKEL Site 2504
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TQYKPIFPPH S YIAASPAYTG Site 2912
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas VSSSDLTGRQ D TSRMSTSQIP Site 2505
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EEWKELIYKE V MDLEERTKNG Site 2514
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable LQVLEANAQP G LQEDQLEPPA Site 2770
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 SEELECPVYP G LQTNSFRDRK Site 2781
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GLGVNRRILA A AAAAAAAVSG Site 2505
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - -----EDLLD  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly HKLVPSHMRP V LASKGLDIDN Site 2506
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk RPDLNQKLIP S HARDALPVKL Site 2504
Species Residue at Site 4899
in 'msaprobs'
muscle

The residue for every species at site 4899 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo RVPLCINPQS A AFKSFISSTV Site 2504
Scheffersomyces.stipitis.SKY1 ---------- - --------PV  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:40, October 16th 2019
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