cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4898 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4898 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4898 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4898 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 LEHDFPDFCV T SLADTLGVPG Site 2811
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge CMTPFSFDFE Q HALTEEQMKE Site 2503
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 IDEAMNPLNP N QLKGASSEGT Site 2504
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -RATSLSRAA V ARGARDEPLH Site 2707
Chlamydomonas.reinhardtii.LF4 GGVGVNKYKA N VGKTNSKYIS Site 2800
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g RPNLNKAILP P HVYESLDVDI Site 2504
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -MLKQKTHQG Q PNPAILLEQL Site 2073
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -NAQPTANDE Q NAKNAAQDRN Site 2712
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho AAYPNPGPST S QPQSSMGYSA Site 2673
Schizosaccharomyces.octosporus.b.IME2 QASRSISCQA Y PNFMVYNPSS Site 2781
Candida.albicans.MAPK3..Extracellular.signal.regul ISDKIPEDFF D FDKMKDQLTI Site 2503
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -SKQNVVSNS P NASHVLNAGI Site 2504
Suberites.domuncula.JNK..Stress.activated.protein. VHAPPPKRYD H ALDEQSIPLD Site 2258
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei YQHQFATQSY I GSSRGSTIYT Site 2911
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar GFQYLPQLSS S NVLPALDSKK Site 2504
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM PFRINMENDD I SRDALKSLIF Site 2501
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -DNADAPMDH A THSKAQGSID Site 2504
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -LNNKRLESN A SQMLSQPFSM Site 2717
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -TTTTSSSNP N QTTFYRQNKV Site 2684
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ---------D  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ASIFSLKEIQ L QKDPGYRGLA Site 2505
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. HWYTTVLIGT Q QFSLVQNNFH Site 2506
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET PSSSINDISS M STDQTLASDT Site 2504
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 RHSPSGIYNI N VTTLVSGPPL Site 2742
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U PSSSINDISS M STDQTLASDT Site 2504
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. HEKLTVDEWK Q HIYKEIVNFS Site 2508
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo NRVPLCINPQ S AAFKSFISST Site 2503
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar VSESRVPSLA A IDLHNTSLAS Site 2756
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. TSSSSGDASS M STDPTLPSDT Site 2504
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d AGLHWGGPTQ S SAYGKLYRGP Site 2810
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. PLKCAAVNKK T DTQKDIKPHL Site 2678
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -TKLPSGNPL P AHLYQFTPDE Site 2503
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -TKLPNNKDL P EDLFRFLPSE Site 2503
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -MLKQKTHQG Q PNPAILLEQL Site 2073
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -PRNSPGEAG K STRRHYESVV Site 2692
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO QIPTQYSQFG P LSPAQVAASK Site 2910
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl NRVPLCINPQ S AAFKSFISST Site 2503
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 KLQYLPQLTG S SILPALDNKK Site 2504
Homo.sapiens.HIPK3..Homeodomain.interacting.protei QTQYKPIFPP H SYIAASPAYT Site 2911
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O LGYSQLGDDD L KETGFHLTTT Site 2506
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d PYPDQLANKG G QNGIGFTRAA Site 2902
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O LGYSQLGDDD L KETGFHLTTT Site 2506
Naegleria.gruberi.LF4 KAPPIFQNNV H ASLSNSNKNE Site 2729
Saccharomyces.bayanus.IME2 PDFTPRNFLI P TLEKSQEKFE Site 2726
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a LDEADQSLEQ W KRLTFTEILT Site 2463
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki LQKQQQQQQQ Q QQQIQSQPEP Site 2504
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d LPGSSLLRYN G WKHSRSRSSQ Site 2881
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a GAQGAARAAL G GYSQAYGTVC Site 2738
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific PNSIARAASN L AMMCNSGRKL Site 2504
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 EKSATSATRQ W PTPPYDDGDW Site 2778
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se LYGVALCINP Q SAAYKNFASS Site 2503
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. RTYNPTAKNL N IVNRTQPVPS Site 2771
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. PSSSVNDISS M STDQTLASDT Site 2504
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. PPLFNFKSHE L KGVPAEILVK Site 2505
Penicillium.marneffei.IME2 KIPEDTSSRQ W PTPPYGEQEW Site 2781
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ----DEPEAD P YDQSFESRDL Site 2504
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a KPEDLPDNKL G DLNGACIPEH Site 2774
Drosophila.melanogaster.MAK ASSFPWDESN R TEDEKLTAWM Site 2775
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de SGTTLQWGGP A QSYGKPYRGA Site 2808
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- L PNAFSKPIPY Site 2238
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -----CEPEL M PTFPHHRNKR Site 2504
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin PSSSVNDISS M STDQTLASDT Site 2504
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a QSSSINDISS M STEQTLASDT Site 2501
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -MLKQKTHQG Q PNPAILLEQL Site 2073
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p PIHYPERRIS E DDSEVSSKRV Site 2504
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen PAGTTTLTPS S QALTETPTSS Site 2504
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. HAIEEWKELI Y KEVMDWEERS Site 2503
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a KPEDLPENKL G DLNGACISEH Site 2774
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d SIFALKEVQL Q KEANIRSTSM Site 2504
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein PRRISCEDSD I KTMTYQGTKR Site 2504
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. YTYEEVINYT P ILRKDSKRKS Site 2503
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---RTRLPNG N ALPPLFDFTS Site 2505
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD STPNSIPVQS P STTNTTSSTT Site 2677
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot PNSSTEALKE K ENLLIGIKRK Site 2504
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str LLVDGEHTVE E WRAMLFAELQ Site 2504
Debaryomyces.hansenii.IME2 TEQYIPNNLA A LKEPLEDEFG Site 2741
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati LPNGRSLPPL F NWLPGELDEV Site 2503
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin RILAAAAAAA A AVQVNGTNIV Site 2503
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE FTQNRPSVAK L KEEIDQRMRS Site 2259
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PKAHPGPPHV H DFHVDRPLEE Site 2504
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----CKENLD  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ---------S  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP AAPLEDDFFD F DRRKEELTML Site 2504
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U --------FA D KRFSQHLELC Site 2242
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AGGAGGGGGA G AATAAATATG Site 2724
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -DWTCVYASE K DKKKMLENKN Site 2051
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. GAQGGARALL G GYSQAYGTVC Site 2741
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d LAAIDLHVSS V ASHQGAGSPL Site 2749
Dictyostelium.discoideum.CDK10..Probable.cyclin.de QNNQTNQNNQ T NQNNQTNQNN Site 2504
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d FSFFVRHVMR E ALIHRAQVNQ Site 2911
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa PNFNLSRIQS S SELFNLLQQQ Site 2507
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----CKENLD  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep --CEPELMPT F PHHRNKRATP Site 2504
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac SSSSVNDVSS M STDPTLASDT Site 2504
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. EKLSVDEWKQ H IYKEISNFSP Site 2504
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri QGKRPPLCIN P HSAAFKTFIR Site 2503
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha PSSSANDISS M STDQTLASDT Site 2504
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 PRSINEFKRD Y AQSPAGKNNS Site 2717
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen QSFESRELDI E EWKRQTYEEM Site 2504
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar AFSEVRIHPM S QSSSSGSSNA Site 2847
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. DSNLSLIDSL P LLHFEESELQ Site 2503
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D KACRHRHHKP N HHAPYDHMRP Site 2876
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U YQAQFAHQTY I PASPTSTVYT Site 2797
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d GLQYLPQLTS S RILPALDNKK Site 2504
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PLTTSYNPSS Q ALTEAQTGQD Site 2504
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro GSLPQSMAGG R LPSSSNFRPA Site 2504
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d NCSIEALKEQ Q NLNLGIKRKR Site 2500
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PKAHPGPPHI H DFHVDRPLEE Site 2504
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi PNSILKAAKT L YEHYSGGESH Site 2504
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen QAAASPPANA T AASDTNAGDR Site 2504
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable ERFTSSLVSD S SAFSKPGLPP Site 2754
Aspergillus.fumigatus.IME2 TPCRRDEKID H ASSNRQWPTP Site 2770
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan AAYQNPGPST S LPQSSMGYSS Site 2673
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha REKLSIEEWK K HIYKEILSFS Site 2508
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S LYGVALCINP Q SAAYKNFASS Site 2503
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma YPAQFAHQTY I SASPASTVYT Site 2911
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina EPFTFAMELD D LPKERLKELI Site 2504
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d SIFSLKEIQL Q KDPGFRNSSY Site 2504
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -----CEPEL M PTFPHHRNKR Site 2504
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de PPGYLPQLAS S TVFPAVENRR Site 2504
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S YDHSVDEREH T VEQWKELIYE Site 2502
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. GVELETSEWK S NDFSLVPFSL Site 2507
Candida.glabrata.IME2 FENNSELRSP N TNEAKASTYE Site 2763
Homo.sapiens.MAK..Serine.threonine.protein.kinase. RTYNPTAKNL N IVNRAQPIPS Site 2771
Schizosaccharomyces.pombe.IME2 RDFPDFGITS L AGSLTLPDSK Site 2799
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P VSEKIPEDFF D FDKRKDELSI Site 2503
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom LEGIRGSRAQ G LPAHHPHPHG Site 2767
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -QKAAQQAAS S SGQGQQAQTP Site 2076
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ASIFSLKEIQ L QKDPGYRGLA Site 2505
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d RQQNQLLPLI P GSHISPTPDG Site 2503
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH IRPDLNQKLI P SHARDALPVK Site 2503
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD TLSMPEIKSN A KQRKQKQKWS Site 2671
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ----ARLPSG R ALPQLEMDGP Site 2504
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. FFHTQPRSTP G LIPRPPAAQP Site 2789
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act WLEGHGMNPA D IESLQREIQM Site 2788
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. QSFESRDLLI D EWKSLTYDEV Site 2504
Lachancea.thermotolerans.SKY1 ---------- - ---------A  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a VGSPLKSIQA T LTPSAMKSSP Site 2822
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. DVDRTLEEWK R VTYKEVLSFK Site 2508
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U YPHQFAAQSY I GASRGSAIYT Site 2911
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. EESLFAVSGV K LKPEMCDLSA Site 2504
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD EYRNRLYNDI I KKKKEERKKQ Site 2504
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen QAAASTPTNA T AASDANTGDR Site 2504
Drosophila.melanogaster.GSK3H..Putative.glycogen.s DYDYDDGGQC N STYISDDMDE Site 2727
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD EMPDFPNYKS R QNQTDRKKPE Site 2503
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 RGFMVPLISD N DTTTSTNTTV Site 2753
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a AEAPFKFDME L DDLPKEKLKE Site 2504
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. EESLFTVSGV R LKPEMCDLLA Site 2504
Cryptococcus.neoformans.IME2 SASLQYQQSA Q TLPSFSDIAN Site 2810
Homo.sapiens.HIPK4..Homeodomain.interacting.protei ESVRGPRAQG L PPRRSHQHGP Site 2768
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 KSSAVGKENV D AFYENVDHYD Site 2690
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom YQHQFATQSY I GSSRGSTIYT Site 2911
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQAAAAAAAA Q QQQQQQQQQQ Site 2709
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep HSRQRMQPPH E FTVDRPLHES Site 2504
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. TQGLQYLPQL A SSNMSPAPEM Site 2503
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. RPLKCIPASK K TDPQKDLKPA Site 2677
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - -----RDHNN  
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a WLEGHGMNPA D IESLQREIQM Site 2788
Mus.musculus.ICK..Serine.threonine.protein.kinase. FFHTQPRSTP G LIPRPPAAQP Site 2789
Saccharomyces.castelli.IME2 DVAPRTFEIP H LGPSEEVTNN Site 2768
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep NCPVEALKEP A NPTVATKRKR Site 2503
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. SIFTVPNVRL Q PEAGESMRAF Site 2504
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly LPPLFDFTED E LRACTPEMRA Site 2505
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---NTYLLDG E STDEDDVVSS Site 2504
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli PNSSTEALKE K ENLLIGIKRK Site 2503
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho EYLAPPRRKG S QITQQSTNQS Site 2503
Homo.sapiens.HIPK2..Homeodomain.interacting.protei YPAQFAHQTY I SASPASTVYT Site 2911
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 VGVNGTSGDK K KSNQVGGTKR Site 2710
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin QDFHHQQQQQ Q QQQQQQQQQQ Site 2525
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G QDHAHSSTSG N HYSGGAGGTS Site 2505
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de SIFALKEIQL Q KEASLRSSSM Site 2504
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d SIFSLKEIQL Q KDPGFRNSSY Site 2504
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA HEKLSIEEWK K HIYKEILSFS Site 2508
Candida.albicans.SSN3..Serine.threonine.protein.ki MQQQIHSQQL Q SHGANSTYKR Site 2676
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GSVRERMEPP S GVGGQKAPVS Site 2720
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA PPHVSQNSSS S TAPHDTPEPS Site 2504
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara ATLPLEEWKR L SFKEVRSFVP Site 2504
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de KTNEQHPSST S LHQQSTSDLK Site 2747
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U QTQFKPIFPS H SYITASPAYA Site 2911
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d LGYSQLGDDD L KETGFHLTTT Site 2506
Candida.dubliniensis.IME2 RAGNGTSDLK K KQSKAAGTKR Site 2709
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a QSSSINDISS M STEHTLASDT Site 2504
Aspergillus.niger.IME2 KTDANTSRQW P TPPYEDGDWA Site 2781
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge QSFESRELDI E EWKRLTYEEV Site 2504
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d SKIPTLLNVD Q NQEKQEGGDG Site 2770
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. SIFTVPNVRL Q PEAGESMRAF Site 2504
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 EDLLNPDTFF T EGFHDSFDEL Site 2765
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. PLPYDHNMDV E QNVDSWREHI Site 2504
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P FTRHVPPHQR S VLAARGLDID Site 2505
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ---------V  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -ARLPSGRPL P TLEMDGPMGT Site 2504
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. DVDRTLDEWK R VTYKEVLSFK Site 2508
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 NRIPRSFAVP R ISEECSTSVQ Site 2742
Debaryomyces.hansenii.SKY1 ---------- - ---------P  
Saccharomyces.cerevisiae.IME2 PDFTPRNFLI P TLKKSREKFE Site 2726
Schizosaccharomyces.japonicus.b.IME2 YTPGFPSNQE T PIRNARIQSN Site 2800
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----KDSVDS  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a VGSPLKSIQA T LTPSAMKSSP Site 2822
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----YKDNLN  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST IFDFDVETEL G HVPLVERPAI Site 2504
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk DSFDNVNLPL E EWKRLTHEEL Site 2504
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KIPTLLSMDP N QEKQEGGDGD Site 2777
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act VEEWKELIYK E VLEWEERTKN Site 2504
Candida.albicans.IME2 RAGNEAHDLK K KSSKVAGTKR Site 2709
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ------ACSK  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ---------R  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. QSFESRDLLI D EWKSLTYDEV Site 2504
Kluyveromyces.lactis.IME2 QQRVLDCLLD P SEHASQNLIQ Site 2776
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina WLEGHGMNPA D IESLQREIQM Site 2788
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. PSSAVNDISS M STDQTLASDT Site 2504
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. AKERTLEEWK E LTYQEVLSFK Site 2508
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -MLKQKTHQG Q PNPAILLEQL Site 2073
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. AKERTLEEWK E LTYQEVLSFK Site 2508
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - -AQIKRKARN  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME KKSHGAGGSS A STGFVLNAGI Site 2678
Neurospora.crassa.IME2 PKKRSSEYKW P TPPYNDEGDW Site 2794
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---CEPELMP T FPHHRNKRAA Site 2504
Ashbya.gossypii.IME2 DFIMEPTTIP Q HDILPPAQVR Site 2783
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi PNSILKTAKT L YERYNCGEGQ Site 2504
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ITTDLKLLEF D ENVELGHLSP Site 2504
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace THRCHIHRCH T RKRTTLKGRT Site 2752
Schizosaccharomyces.pombe.b.IME2 MTSVLEYSTP N PAEVQNICND Site 2737
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a AEAPFKFDME L DDLPKEKLKE Site 2503
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom QTQYKPIFPP H SYIAASPAYT Site 2911
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -VSSSDLTGR Q DTSRMSTSQI Site 2504
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac IEEWKELIYK E VMDLEERTKN Site 2513
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ILQVLEANAQ P GLQEDQLEPP Site 2769
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 RSEELECPVY P GLQTNSFRDR Site 2780
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil GGLGVNRRIL A AAAAAAAAVS Site 2504
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ------EDLL  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly NHKLVPSHMR P VLASKGLDID Site 2505
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk IRPDLNQKLI P SHARDALPVK Site 2503
Species Residue at Site 4898
in 'msaprobs'
muscle

The residue for every species at site 4898 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo NRVPLCINPQ S AAFKSFISST Site 2503
Scheffersomyces.stipitis.SKY1 ---------- - ---------P  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 00:31, August 11th 2020
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