cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4896 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4896 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4896 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4896 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 DILEHDFPDF C VTSLADTLGV Site 2809
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge PVCMTPFSFD F EQHALTEEQM Site 2501
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 LEIDEAMNPL N PNQLKGASSE Site 2502
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---RATSLSR A AVARGARDEP Site 2705
Chlamydomonas.reinhardtii.LF4 GVGGVGVNKY K ANVGKTNSKY Site 2798
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g SIRPNLNKAI L PPHVYESLDV Site 2502
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---MLKQKTH Q GQPNPAILLE Site 2071
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---NAQPTAN D EQNAKNAAQD Site 2710
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho PHAAYPNPGP S TSQPQSSMGY Site 2671
Schizosaccharomyces.octosporus.b.IME2 DFQASRSISC Q AYPNFMVYNP Site 2779
Candida.albicans.MAPK3..Extracellular.signal.regul EPISDKIPED F FDFDKMKDQL Site 2501
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---SKQNVVS N SPNASHVLNA Site 2502
Suberites.domuncula.JNK..Stress.activated.protein. AEVHAPPPKR Y DHALDEQSIP Site 2252
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei AQYQHQFATQ S YIGSSRGSTI Site 2909
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar VPGFQYLPQL S SSNVLPALDS Site 2502
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM EVPFRINMEN D DISRDALKSL Site 2499
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---DNADAPM D HATHSKAQGS Site 2502
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---LNNKRLE S NASQMLSQPF Site 2715
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---TTTTSSS N PNQTTFYRQN Site 2682
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d DTASIFSLKE I QLQKDPGYRG Site 2503
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. NFHWYTTVLI G TQQFSLVQNN Site 2504
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET LPPSSSINDI S SMSTDQTLAS Site 2502
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 PNRHSPSGIY N INVTTLVSGP Site 2740
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U PPPSSSINDI S SMSTDQTLAS Site 2502
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. LEHEKLTVDE W KQHIYKEIVN Site 2506
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo KGNRVPLCIN P QSAAFKSFIS Site 2501
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar KTVSESRVPS L AAIDLHNTSL Site 2754
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. AHTSSSSGDA S SMSTDPTLPS Site 2502
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SGAGLHWGGP T QSSAYGKLYR Site 2808
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. LRPLKCAAVN K KTDTQKDIKP Site 2676
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---TKLPSGN P LPAHLYQFTP Site 2501
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---TKLPNNK D LPEDLFRFLP Site 2501
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---MLKQKTH Q GQPNPAILLE Site 2071
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---PRNSPGE A GKSTRRHYES Site 2690
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO HIQIPTQYSQ F GPLSPAQVAA Site 2908
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl KGNRVPLCIN P QSAAFKSFIS Site 2501
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 TSKLQYLPQL T GSSILPALDN Site 2502
Homo.sapiens.HIPK3..Homeodomain.interacting.protei IHQTQYKPIF P PHSYIAASPA Site 2909
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O GGLGYSQLGD D DLKETGFHLT Site 2504
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d GAPYPDQLAN K GGQNGIGFTR Site 2900
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O GGLGYSQLGD D DLKETGFHLT Site 2504
Naegleria.gruberi.LF4 SNKAPPIFQN N VHASLSNSNK Site 2727
Saccharomyces.bayanus.IME2 SMPDFTPRNF L IPTLEKSQEK Site 2724
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a HSLDEADQSL E QWKRLTFTEI Site 2461
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QLLQKQQQQQ Q QQQQQIQSQP Site 2502
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d LQLPGSSLLR Y NGWKHSRSRS Site 2879
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a SQGAQGAARA A LGGYSQAYGT Site 2736
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific QSPNSIARAA S NLAMMCNSGR Site 2502
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 SDEKSATSAT R QWPTPPYDDG Site 2776
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se PALYGVALCI N PQSAAYKNFA Site 2501
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. SGRTYNPTAK N LNIVNRTQPV Site 2769
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. LPPSSSVNDI S SMSTDQTLAS Site 2502
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. FLPPLFNFKS H ELKGVPAEIL Site 2503
Penicillium.marneffei.IME2 VTKIPEDTSS R QWPTPPYGEQ Site 2779
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ------DEPE A DPYDQSFESR Site 2502
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a CTKPEDLPDN K LGDLNGACIP Site 2772
Drosophila.melanogaster.MAK AVASSFPWDE S NRTEDEKLTA Site 2773
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de NSSGTTLQWG G PAQSYGKPYR Site 2806
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - -LPNAFSKPI  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d -------CEP E LMPTFPHHRN Site 2243
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin LPPSSSVNDI S SMSTDQTLAS Site 2502
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a PSQSSSINDI S SMSTEQTLAS Site 2499
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---MLKQKTH Q GQPNPAILLE Site 2071
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p NQPIHYPERR I SEDDSEVSSK Site 2502
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen RSPAGTTTLT P SSQALTETPT Site 2502
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. REHAIEEWKE L IYKEVMDWEE Site 2501
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a CTKPEDLPEN K LGDLNGACIS Site 2772
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d TTSIFALKEV Q LQKEANIRST Site 2502
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein YPPRRISCED S DIKTMTYQGT Site 2502
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. RKYTYEEVIN Y TPILRKDSKR Site 2501
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -----RTRLP N GNALPPLFDF Site 2503
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSTPNSIPV Q SPSTTNTTSS Site 2675
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot PRPNSSTEAL K EKENLLIGIK Site 2502
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str TILLVDGEHT V EEWRAMLFAE Site 2502
Debaryomyces.hansenii.IME2 NNTEQYIPNN L AALKEPLEDE Site 2739
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati TRLPNGRSLP P LFNWLPGELD Site 2501
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin NRRILAAAAA A AAAVQVNGTN Site 2501
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE --FTQNRPSV A KLKEEIDQRM Site 2257
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PAPKAHPGPP H VHDFHVDRPL Site 2502
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ------CKEN  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP PVAAPLEDDF F DFDRRKEELT Site 2502
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- F ADKRFSQHLE Site 2240
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AVAGGAGGGG G AGAATAAATA Site 2722
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---DWTCVYA S EKDKKKMLEN Site 2049
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. LQGAQGGARA L LGGYSQAYGT Site 2739
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d PSLAAIDLHV S SVASHQGAGS Site 2747
Dictyostelium.discoideum.CDK10..Probable.cyclin.de FVQNNQTNQN N QTNQNNQTNQ Site 2502
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d SGFSFFVRHV M REALIHRAQV Site 2909
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa NNPNFNLSRI Q SSSELFNLLQ Site 2505
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ------CKEN  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ----CEPELM P TFPHHRNKRA Site 2502
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac PSSSSSVNDV S SMSTDPTLAS Site 2502
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. EHEKLSVDEW K QHIYKEISNF Site 2502
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri QQQGKRPPLC I NPHSAAFKTF Site 2501
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha LPPSSSANDI S SMSTDQTLAS Site 2502
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 KEPRSINEFK R DYAQSPAGKN Site 2715
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen FDQSFESREL D IEEWKRQTYE Site 2502
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar KPAFSEVRIH P MSQSSSSGSS Site 2845
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. GSDSNLSLID S LPLLHFEESE Site 2501
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D HHKACRHRHH K PNHHAPYDHM Site 2874
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U SQYQAQFAHQ T YIPASPTSTV Site 2795
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d LTGLQYLPQL T SSRILPALDN Site 2502
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen ASPLTTSYNP S SQALTEAQTG Site 2502
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro KMGSLPQSMA G GRLPSSSNFR Site 2502
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d RPNCSIEALK E QQNLNLGIKR Site 2498
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PAPKAHPGPP H IHDFHVDRPL Site 2502
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi NSPNSILKAA K TLYEHYSGGE Site 2502
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen RIQAAASPPA N ATAASDTNAG Site 2502
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable IKERFTSSLV S DSSAFSKPGL Site 2752
Aspergillus.fumigatus.IME2 DSTPCRRDEK I DHASSNRQWP Site 2768
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan PHAAYQNPGP S TSLPQSSMGY Site 2671
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha LEREKLSIEE W KKHIYKEILS Site 2506
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S PALYGVALCI N PQSAAYKNFA Site 2501
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma SQYPAQFAHQ T YISASPASTV Site 2909
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina AEEPFTFAME L DDLPKERLKE Site 2502
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d SVSIFSLKEI Q LQKDPGFRNS Site 2502
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. -------CEP E LMPTFPHHRN Site 2243
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de HLPPGYLPQL A SSTVFPAVEN Site 2502
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EPYDHSVDER E HTVEQWKELI Site 2500
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. FEGVELETSE W KSNDFSLVPF Site 2463
Candida.glabrata.IME2 NIFENNSELR S PNTNEAKAST Site 2761
Homo.sapiens.MAK..Serine.threonine.protein.kinase. SGRTYNPTAK N LNIVNRAQPI Site 2769
Schizosaccharomyces.pombe.IME2 LDRDFPDFGI T SLAGSLTLPD Site 2797
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P EPVSEKIPED F FDFDKRKDEL Site 2501
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom WTLEGIRGSR A QGLPAHHPHP Site 2765
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---QKAAQQA A SSSGQGQQAQ Site 2073
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d DTASIFSLKE I QLQKDPGYRG Site 2503
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d RRRQQNQLLP L IPGSHISPTP Site 2501
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LSIRPDLNQK L IPSHARDALP Site 2501
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD PVTLSMPEIK S NAKQRKQKQK Site 2669
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ------ARLP S GRALPQLEMD Site 2502
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. RPFFHTQPRS T PGLIPRPPAA Site 2787
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ADWLEGHGMN P ADIESLQREI Site 2786
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. YDQSFESRDL L IDEWKSLTYD Site 2502
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a SPVGSPLKSI Q ATLTPSAMKS Site 2820
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. FDDVDRTLEE W KRVTYKEVLS Site 2506
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U AQYPHQFAAQ S YIGASRGSAI Site 2909
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. PDEESLFAVS G VKLKPEMCDL Site 2502
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD IAEYRNRLYN D IIKKKKEERK Site 2502
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen RIQAAASTPT N ATAASDANTG Site 2502
Drosophila.melanogaster.GSK3H..Putative.glycogen.s ENDYDYDDGG Q CNSTYISDDM Site 2725
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD NSEMPDFPNY K SRQNQTDRKK Site 2501
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 IPRGFMVPLI S DNDTTTSTNT Site 2751
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a PIAEAPFKFD M ELDDLPKEKL Site 2502
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. PDEESLFTVS G VRLKPEMCDL Site 2502
Cryptococcus.neoformans.IME2 ASSASLQYQQ S AQTLPSFSDI Site 2808
Homo.sapiens.HIPK4..Homeodomain.interacting.protei TLESVRGPRA Q GLPPRRSHQH Site 2766
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 RSKSSAVGKE N VDAFYENVDH Site 2688
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom AQYQHQFATQ S YIGSSRGSTI Site 2909
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QAQQAAAAAA A AQQQQQQQQQ Site 2707
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep GKHSRQRMQP P HEFTVDRPLH Site 2502
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RRTQGLQYLP Q LASSNMSPAP Site 2501
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. VLRPLKCIPA S KKTDPQKDLK Site 2675
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - -------RDH  
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ADWLEGHGMN P ADIESLQREI Site 2786
Mus.musculus.ICK..Serine.threonine.protein.kinase. RPFFHTQPRS T PGLIPRPPAA Site 2787
Saccharomyces.castelli.IME2 FPDVAPRTFE I PHLGPSEEVT Site 2766
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep RPNCPVEALK E PANPTVATKR Site 2501
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. MSSIFTVPNV R LQPEAGESMR Site 2502
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly KPLPPLFDFT E DELRACTPEM Site 2503
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -----NTYLL D GESTDEDDVV Site 2502
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli PRPNSSTEAL K EKENLLIGIK Site 2501
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho MFEYLAPPRR K GSQITQQSTN Site 2501
Homo.sapiens.HIPK2..Homeodomain.interacting.protei SQYPAQFAHQ T YISASPASTV Site 2909
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 RSVGVNGTSG D KKKSNQVGGT Site 2708
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin NQQDFHHQQQ Q QQQQQQQQQQ Site 2523
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TSQDHAHSST S GNHYSGGAGG Site 2503
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de TTSIFALKEI Q LQKEASLRSS Site 2502
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d SVSIFSLKEI Q LQKDPGFRNS Site 2502
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA LEHEKLSIEE W KKHIYKEILS Site 2506
Candida.albicans.SSN3..Serine.threonine.protein.ki HQMQQQIHSQ Q LQSHGANSTY Site 2674
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF ARGSVRERME P PSGVGGQKAP Site 2718
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA LIPPHVSQNS S SSTAPHDTPE Site 2502
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara DNATLPLEEW K RLSFKEVRSF Site 2464
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de NQKTNEQHPS S TSLHQQSTSD Site 2745
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U IHQTQFKPIF P SHSYITASPA Site 2909
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d GGLGYSQLGD D DLKETGFHLT Site 2504
Candida.dubliniensis.IME2 PRRAGNGTSD L KKKQSKAAGT Site 2707
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a PSQSSSINDI S SMSTEHTLAS Site 2502
Aspergillus.niger.IME2 EEKTDANTSR Q WPTPPYEDGD Site 2779
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge YDQSFESREL D IEEWKRLTYE Site 2502
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d ESSKIPTLLN V DQNQEKQEGG Site 2768
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. MSSIFTVPNV R LQPEAGESMR Site 2502
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 KSEDLLNPDT F FTEGFHDSFD Site 2763
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. PPPLPYDHNM D VEQNVDSWRE Site 2502
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P FNFTRHVPPH Q RSVLAARGLD Site 2503
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---ARLPSGR P LPTLEMDGPM Site 2502
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. FDDVDRTLDE W KRVTYKEVLS Site 2506
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 SSNRIPRSFA V PRISEECSTS Site 2740
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 SMPDFTPRNF L IPTLKKSREK Site 2724
Schizosaccharomyces.japonicus.b.IME2 IYYTPGFPSN Q ETPIRNARIQ Site 2798
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ------KDSV  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a SPVGSPLKSI Q ATLTPSAMKS Site 2820
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ------YKDN  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST LRIFDFDVET E LGHVPLVERP Site 2502
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk YDDSFDNVNL P LEEWKRLTHE Site 2502
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de SSKIPTLLSM D PNQEKQEGGD Site 2775
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act HSVEEWKELI Y KEVLEWEERT Site 2502
Candida.albicans.IME2 PRRAGNEAHD L KKKSSKVAGT Site 2707
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - --------AC  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. YDQSFESRDL L IDEWKSLTYD Site 2502
Kluyveromyces.lactis.IME2 AVQQRVLDCL L DPSEHASQNL Site 2774
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ADWLEGHGMN P ADIESLQREI Site 2786
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. LPPSSAVNDI S SMSTDQTLAS Site 2502
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. VEAKERTLEE W KELTYQEVLS Site 2506
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---MLKQKTH Q GQPNPAILLE Site 2071
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. VEAKERTLEE W KELTYQEVLS Site 2506
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ---AQIKRKA  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME GNKKSHGAGG S SASTGFVLNA Site 2676
Neurospora.crassa.IME2 LEPKKRSSEY K WPTPPYNDEG Site 2792
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -----CEPEL M PTFPHHRNKR Site 2502
Ashbya.gossypii.IME2 PRDFIMEPTT I PQHDILPPAQ Site 2781
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi NSPNSILKTA K TLYERYNCGE Site 2502
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p NQITTDLKLL E FDENVELGHL Site 2502
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace AHTHRCHIHR C HTRKRTTLKG Site 2750
Schizosaccharomyces.pombe.b.IME2 MEMTSVLEYS T PNPAEVQNIC Site 2735
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a PIAEAPFKFD M ELDDLPKEKL Site 2501
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom IHQTQYKPIF P PHSYIAASPA Site 2909
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---VSSSDLT G RQDTSRMSTS Site 2502
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac HTIEEWKELI Y KEVMDLEERT Site 2511
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable DEILQVLEAN A QPGLQEDQLE Site 2767
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 WVRSEELECP V YPGLQTNSFR Site 2778
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ALGGLGVNRR I LAAAAAAAAA Site 2502
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - --------ED  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly QLNHKLVPSH M RPVLASKGLD Site 2503
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LSIRPDLNQK L IPSHARDALP Site 2501
Species Residue at Site 4896
in 'msaprobs'
muscle

The residue for every species at site 4896 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo KGNRVPLCIN P QSAAFKSFIS Site 2501
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 09:15, October 28th 2020
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