cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4895 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4895 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4895 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4895 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 SDILEHDFPD F CVTSLADTLG Site 2808
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge EPVCMTPFSF D FEQHALTEEQ Site 2500
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 NLEIDEAMNP L NPNQLKGASS Site 2501
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ----RATSLS R AAVARGARDE Site 2704
Chlamydomonas.reinhardtii.LF4 VGVGGVGVNK Y KANVGKTNSK Site 2797
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g LSIRPNLNKA I LPPHVYESLD Site 2501
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ----MLKQKT H QGQPNPAILL Site 2070
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ----NAQPTA N DEQNAKNAAQ Site 2709
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho NPHAAYPNPG P STSQPQSSMG Site 2670
Schizosaccharomyces.octosporus.b.IME2 PDFQASRSIS C QAYPNFMVYN Site 2778
Candida.albicans.MAPK3..Extracellular.signal.regul DEPISDKIPE D FFDFDKMKDQ Site 2500
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ----SKQNVV S NSPNASHVLN Site 2501
Suberites.domuncula.JNK..Stress.activated.protein. -AEVHAPPPK R YDHALDEQSI Site 2251
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei PAQYQHQFAT Q SYIGSSRGST Site 2908
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar HVPGFQYLPQ L SSSNVLPALD Site 2501
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM AEVPFRINME N DDISRDALKS Site 2498
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ----DNADAP M DHATHSKAQG Site 2501
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ----LNNKRL E SNASQMLSQP Site 2714
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ----TTTTSS S NPNQTTFYRQ Site 2530
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d EDTASIFSLK E IQLQKDPGYR Site 2502
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. NNFHWYTTVL I GTQQFSLVQN Site 2503
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET SLPPSSSIND I SSMSTDQTLA Site 2501
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 KPNRHSPSGI Y NINVTTLVSG Site 2739
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U SPPPSSSIND I SSMSTDQTLA Site 2501
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. SLEHEKLTVD E WKQHIYKEIV Site 2505
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QKGNRVPLCI N PQSAAFKSFI Site 2500
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar NKTVSESRVP S LAAIDLHNTS Site 2753
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. QAHTSSSSGD A SSMSTDPTLP Site 2501
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SSGAGLHWGG P TQSSAYGKLY Site 2807
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. VLRPLKCAAV N KKTDTQKDIK Site 2675
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ----TKLPSG N PLPAHLYQFT Site 2500
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ----TKLPNN K DLPEDLFRFL Site 2500
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ----MLKQKT H QGQPNPAILL Site 2070
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ----PRNSPG E AGKSTRRHYE Site 2689
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO AHIQIPTQYS Q FGPLSPAQVA Site 2907
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl QKGNRVPLCI N PQSAAFKSFI Site 2500
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 ETSKLQYLPQ L TGSSILPALD Site 2501
Homo.sapiens.HIPK3..Homeodomain.interacting.protei TIHQTQYKPI F PPHSYIAASP Site 2908
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O EGGLGYSQLG D DDLKETGFHL Site 2503
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d EGAPYPDQLA N KGGQNGIGFT Site 2899
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O EGGLGYSQLG D DDLKETGFHL Site 2503
Naegleria.gruberi.LF4 QSNKAPPIFQ N NVHASLSNSN Site 2726
Saccharomyces.bayanus.IME2 NSMPDFTPRN F LIPTLEKSQE Site 2723
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a DHSLDEADQS L EQWKRLTFTE Site 2460
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQLLQKQQQQ Q QQQQQQIQSQ Site 2501
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d ALQLPGSSLL R YNGWKHSRSR Site 2878
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a VSQGAQGAAR A ALGGYSQAYG Site 2735
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific LQSPNSIARA A SNLAMMCNSG Site 2501
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 LSDEKSATSA T RQWPTPPYDD Site 2775
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se RPALYGVALC I NPQSAAYKNF Site 2500
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. FSGRTYNPTA K NLNIVNRTQP Site 2768
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. SLPPSSSVND I SSMSTDQTLA Site 2501
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. RFLPPLFNFK S HELKGVPAEI Site 2502
Penicillium.marneffei.IME2 DVTKIPEDTS S RQWPTPPYGE Site 2778
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen -------DEP E ADPYDQSFES Site 2501
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a LCTKPEDLPD N KLGDLNGACI Site 2771
Drosophila.melanogaster.MAK PAVASSFPWD E SNRTEDEKLT Site 2772
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de ANSSGTTLQW G GPAQSYGKPY Site 2805
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - --LPNAFSKP  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d --------CE P ELMPTFPHHR Site 2242
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin SLPPSSSVND I SSMSTDQTLA Site 2501
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a TPSQSSSIND I SSMSTEQTLA Site 2498
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ----MLKQKT H QGQPNPAILL Site 2070
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p LNQPIHYPER R ISEDDSEVSS Site 2501
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen LRSPAGTTTL T PSSQALTETP Site 2501
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. EREHAIEEWK E LIYKEVMDWE Site 2500
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a LCTKPEDLPE N KLGDLNGACI Site 2771
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d DTTSIFALKE V QLQKEANIRS Site 2501
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein KYPPRRISCE D SDIKTMTYQG Site 2501
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. WRKYTYEEVI N YTPILRKDSK Site 2500
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ------RTRL P NGNALPPLFD Site 2502
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSTPNSIP V QSPSTTNTTS Site 2674
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot LPRPNSSTEA L KEKENLLIGI Site 2501
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str STILLVDGEH T VEEWRAMLFA Site 2501
Debaryomyces.hansenii.IME2 VNNTEQYIPN N LAALKEPLED Site 2738
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati -TRLPNGRSL P PLFNWLPGEL Site 2500
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin VNRRILAAAA A AAAAVQVNGT Site 2500
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---FTQNRPS V AKLKEEIDQR Site 2252
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de GPAPKAHPGP P HVHDFHVDRP Site 2501
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - -------CKE  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP EPVAAPLEDD F FDFDRRKEEL Site 2501
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - FADKRFSQHL  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg AAVAGGAGGG G GAGAATAAAT Site 2721
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ----DWTCVY A SEKDKKKMLE Site 2048
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. ALQGAQGGAR A LLGGYSQAYG Site 2738
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d IPSLAAIDLH V SSVASHQGAG Site 2746
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NFVQNNQTNQ N NQTNQNNQTN Site 2501
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d QSGFSFFVRH V MREALIHRAQ Site 2908
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa LNNPNFNLSR I QSSSELFNLL Site 2504
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - -------CKE  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep -----CEPEL M PTFPHHRNKR Site 2501
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac HPSSSSSVND V SSMSTDPTLA Site 2501
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. LEHEKLSVDE W KQHIYKEISN Site 2501
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri DQQQGKRPPL C INPHSAAFKT Site 2500
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha SLPPSSSAND I SSMSTDQTLA Site 2501
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 SKEPRSINEF K RDYAQSPAGK Site 2714
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen PFDQSFESRE L DIEEWKRQTY Site 2501
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar AKPAFSEVRI H PMSQSSSSGS Site 2844
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. TGSDSNLSLI D SLPLLHFEES Site 2500
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D HHHKACRHRH H KPNHHAPYDH Site 2873
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U PSQYQAQFAH Q TYIPASPTST Site 2794
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d HLTGLQYLPQ L TSSRILPALD Site 2501
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen PASPLTTSYN P SSQALTEAQT Site 2501
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro AKMGSLPQSM A GGRLPSSSNF Site 2501
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d PRPNCSIEAL K EQQNLNLGIK Site 2497
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d GPAPKAHPGP P HIHDFHVDRP Site 2501
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi LNSPNSILKA A KTLYEHYSGG Site 2501
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen ARIQAAASPP A NATAASDTNA Site 2501
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable EIKERFTSSL V SDSSAFSKPG Site 2751
Aspergillus.fumigatus.IME2 QDSTPCRRDE K IDHASSNRQW Site 2767
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan NPHAAYQNPG P STSLPQSSMG Site 2670
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha SLEREKLSIE E WKKHIYKEIL Site 2505
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S RPALYGVALC I NPQSAAYKNF Site 2500
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma PSQYPAQFAH Q TYISASPAST Site 2908
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina VAEEPFTFAM E LDDLPKERLK Site 2501
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ESVSIFSLKE I QLQKDPGFRN Site 2501
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. --------CE P ELMPTFPHHR Site 2242
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de KHLPPGYLPQ L ASSTVFPAVE Site 2501
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S PEPYDHSVDE R EHTVEQWKEL Site 2499
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. TFEGVELETS E WKSNDFSLVP Site 2462
Candida.glabrata.IME2 YNIFENNSEL R SPNTNEAKAS Site 2760
Homo.sapiens.MAK..Serine.threonine.protein.kinase. FSGRTYNPTA K NLNIVNRAQP Site 2768
Schizosaccharomyces.pombe.IME2 FLDRDFPDFG I TSLAGSLTLP Site 2796
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P DEPVSEKIPE D FFDFDKRKDE Site 2500
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom EWTLEGIRGS R AQGLPAHHPH Site 2764
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ----QKAAQQ A ASSSGQGQQA Site 2072
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d HDTASIFSLK E IQLQKDPGYR Site 2502
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d SRRRQQNQLL P LIPGSHISPT Site 2500
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH ELSIRPDLNQ K LIPSHARDAL Site 2500
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD MPVTLSMPEI K SNAKQRKQKQ Site 2668
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR -------ARL P SGRALPQLEM Site 2501
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. GRPFFHTQPR S TPGLIPRPPA Site 2786
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act LADWLEGHGM N PADIESLQRE Site 2785
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. PYDQSFESRD L LIDEWKSLTY Site 2501
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a HSPVGSPLKS I QATLTPSAMK Site 2819
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. SFDDVDRTLE E WKRVTYKEVL Site 2505
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U SAQYPHQFAA Q SYIGASRGSA Site 2908
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. LPDEESLFAV S GVKLKPEMCD Site 2501
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD PIAEYRNRLY N DIIKKKKEER Site 2501
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen ARIQAAASTP T NATAASDANT Site 2501
Drosophila.melanogaster.GSK3H..Putative.glycogen.s DENDYDYDDG G QCNSTYISDD Site 2724
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD LNSEMPDFPN Y KSRQNQTDRK Site 2500
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 QIPRGFMVPL I SDNDTTTSTN Site 2750
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a EPIAEAPFKF D MELDDLPKEK Site 2501
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. LPDEESLFTV S GVRLKPEMCD Site 2501
Cryptococcus.neoformans.IME2 SASSASLQYQ Q SAQTLPSFSD Site 2807
Homo.sapiens.HIPK4..Homeodomain.interacting.protei CTLESVRGPR A QGLPPRRSHQ Site 2765
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 DRSKSSAVGK E NVDAFYENVD Site 2687
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom PAQYQHQFAT Q SYIGSSRGST Site 2908
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A QQAQQAAAAA A AAQQQQQQQQ Site 2706
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep GGKHSRQRMQ P PHEFTVDRPL Site 2501
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RRRTQGLQYL P QLASSNMSPA Site 2500
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. PVLRPLKCIP A SKKTDPQKDL Site 2674
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - --------RD  
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a LADWLEGHGM N PADIESLQRE Site 2785
Mus.musculus.ICK..Serine.threonine.protein.kinase. GRPFFHTQPR S TPGLIPRPPA Site 2786
Saccharomyces.castelli.IME2 PFPDVAPRTF E IPHLGPSEEV Site 2765
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep PRPNCPVEAL K EPANPTVATK Site 2500
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. DMSSIFTVPN V RLQPEAGESM Site 2501
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly GKPLPPLFDF T EDELRACTPE Site 2502
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ------NTYL L DGESTDEDDV Site 2501
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli LPRPNSSTEA L KEKENLLIGI Site 2500
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho SMFEYLAPPR R KGSQITQQST Site 2500
Homo.sapiens.HIPK2..Homeodomain.interacting.protei PSQYPAQFAH Q TYISASPAST Site 2908
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 PRSVGVNGTS G DKKKSNQVGG Site 2707
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin GNQQDFHHQQ Q QQQQQQQQQQ Site 2522
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G ATSQDHAHSS T SGNHYSGGAG Site 2502
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de DTTSIFALKE I QLQKEASLRS Site 2501
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ESVSIFSLKE I QLQKDPGFRN Site 2501
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA SLEHEKLSIE E WKKHIYKEIL Site 2505
Candida.albicans.SSN3..Serine.threonine.protein.ki VHQMQQQIHS Q QLQSHGANST Site 2673
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF AARGSVRERM E PPSGVGGQKA Site 2717
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA ALIPPHVSQN S SSSTAPHDTP Site 2501
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara YDNATLPLEE W KRLSFKEVRS Site 2463
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de ANQKTNEQHP S STSLHQQSTS Site 2744
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U TIHQTQFKPI F PSHSYITASP Site 2908
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d EGGLGYSQLG D DDLKETGFHL Site 2503
Candida.dubliniensis.IME2 EPRRAGNGTS D LKKKQSKAAG Site 2706
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a TPSQSSSIND I SSMSTEHTLA Site 2501
Aspergillus.niger.IME2 AEEKTDANTS R QWPTPPYEDG Site 2778
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge PYDQSFESRE L DIEEWKRLTY Site 2501
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d TESSKIPTLL N VDQNQEKQEG Site 2767
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. DMSSIFTVPN V RLQPEAGESM Site 2501
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 IKSEDLLNPD T FFTEGFHDSF Site 2762
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. APPPLPYDHN M DVEQNVDSWR Site 2501
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P LFNFTRHVPP H QRSVLAARGL Site 2502
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ----ARLPSG R PLPTLEMDGP Site 2501
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. SFDDVDRTLD E WKRVTYKEVL Site 2505
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 SSSNRIPRSF A VPRISEECST Site 2739
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 NSMPDFTPRN F LIPTLKKSRE Site 2723
Schizosaccharomyces.japonicus.b.IME2 SIYYTPGFPS N QETPIRNARI Site 2797
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - -------KDS  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a HSPVGSPLKS I QATLTPSAMK Site 2819
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - -------YKD  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST NLRIFDFDVE T ELGHVPLVER Site 2501
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk PYDDSFDNVN L PLEEWKRLTH Site 2501
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de DSSKIPTLLS M DPNQEKQEGG Site 2774
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act EHSVEEWKEL I YKEVLEWEER Site 2501
Candida.albicans.IME2 EPRRAGNEAH D LKKKSSKVAG Site 2706
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ---------A  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. PYDQSFESRD L LIDEWKSLTY Site 2501
Kluyveromyces.lactis.IME2 RAVQQRVLDC L LDPSEHASQN Site 2773
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina LADWLEGHGM N PADIESLQRE Site 2785
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. SLPPSSAVND I SSMSTDQTLA Site 2501
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. SVEAKERTLE E WKELTYQEVL Site 2505
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ----MLKQKT H QGQPNPAILL Site 2070
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. SVEAKERTLE E WKELTYQEVL Site 2505
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----AQIKRK  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME TGNKKSHGAG G SSASTGFVLN Site 2675
Neurospora.crassa.IME2 SLEPKKRSSE Y KWPTPPYNDE Site 2791
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ------CEPE L MPTFPHHRNK Site 2501
Ashbya.gossypii.IME2 IPRDFIMEPT T IPQHDILPPA Site 2780
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi LNSPNSILKT A KTLYERYNCG Site 2501
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p INQITTDLKL L EFDENVELGH Site 2501
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace LAHTHRCHIH R CHTRKRTTLK Site 2749
Schizosaccharomyces.pombe.b.IME2 GMEMTSVLEY S TPNPAEVQNI Site 2734
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a EPIAEAPFKF D MELDDLPKEK Site 2500
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom TIHQTQYKPI F PPHSYIAASP Site 2908
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ----VSSSDL T GRQDTSRMST Site 2501
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac EHTIEEWKEL I YKEVMDLEER Site 2510
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable ADEILQVLEA N AQPGLQEDQL Site 2766
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 VWVRSEELEC P VYPGLQTNSF Site 2777
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil NALGGLGVNR R ILAAAAAAAA Site 2501
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ---------E  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly PQLNHKLVPS H MRPVLASKGL Site 2502
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk ELSIRPDLNQ K LIPSHARDAL Site 2500
Species Residue at Site 4895
in 'msaprobs'
muscle

The residue for every species at site 4895 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QKGNRVPLCI N PQSAAFKSFI Site 2500
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 20:17, October 20th 2020
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