cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Site 4894 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4894 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4894 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4894 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 SSDILEHDFP D FCVTSLADTL Site 2807
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge DEPVCMTPFS F DFEQHALTEE Site 2499
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 NNLEIDEAMN P LNPNQLKGAS Site 2500
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ -----RATSL S RAAVARGARD Site 2703
Chlamydomonas.reinhardtii.LF4 AVGVGGVGVN K YKANVGKTNS Site 2796
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g ELSIRPNLNK A ILPPHVYESL Site 2500
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 -----MLKQK T HQGQPNPAIL Site 2067
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 -----NAQPT A NDEQNAKNAA Site 2708
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho SNPHAAYPNP G PSTSQPQSSM Site 2669
Schizosaccharomyces.octosporus.b.IME2 APDFQASRSI S CQAYPNFMVY Site 2777
Candida.albicans.MAPK3..Extracellular.signal.regul -DEPISDKIP E DFFDFDKMKD Site 2499
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 -----SKQNV V SNSPNASHVL Site 2500
Suberites.domuncula.JNK..Stress.activated.protein. --AEVHAPPP K RYDHALDEQS Site 2250
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei APAQYQHQFA T QSYIGSSRGS Site 2907
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar KHVPGFQYLP Q LSSSNVLPAL Site 2500
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM VAEVPFRINM E NDDISRDALK Site 2497
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca -----DNADA P MDHATHSKAQ Site 2500
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 -----LNNKR L ESNASQMLSQ Site 2713
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. -----TTTTS S SNPNQTTFYR Site 2528
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d LEDTASIFSL K EIQLQKDPGY Site 2501
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. QNNFHWYTTV L IGTQQFSLVQ Site 2502
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET ESLPPSSSIN D ISSMSTDQTL Site 2500
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 VKPNRHSPSG I YNINVTTLVS Site 2738
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U ESPPPSSSIN D ISSMSTDQTL Site 2500
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. DSLEHEKLTV D EWKQHIYKEI Site 2504
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo QQKGNRVPLC I NPQSAAFKSF Site 2499
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar ENKTVSESRV P SLAAIDLHNT Site 2752
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. SQAHTSSSSG D ASSMSTDPTL Site 2500
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d SSSGAGLHWG G PTQSSAYGKL Site 2806
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. PVLRPLKCAA V NKKTDTQKDI Site 2674
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. -----TKLPS G NPLPAHLYQF Site 2499
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G -----TKLPN N KDLPEDLFRF Site 2499
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 -----MLKQK T HQGQPNPAIL Site 2067
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 -----PRNSP G EAGKSTRRHY Site 2688
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO PAHIQIPTQY S QFGPLSPAQV Site 2906
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl QQKGNRVPLC I NPQSAAFKSF Site 2499
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 TETSKLQYLP Q LTGSSILPAL Site 2500
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PTIHQTQYKP I FPPHSYIAAS Site 2907
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O PEGGLGYSQL G DDDLKETGFH Site 2502
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d AEGAPYPDQL A NKGGQNGIGF Site 2898
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O PEGGLGYSQL G DDDLKETGFH Site 2502
Naegleria.gruberi.LF4 FQSNKAPPIF Q NNVHASLSNS Site 2725
Saccharomyces.bayanus.IME2 FNSMPDFTPR N FLIPTLEKSQ Site 2722
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a YDHSLDEADQ S LEQWKRLTFT Site 2265
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki QQQLLQKQQQ Q QQQQQQQIQS Site 2500
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d PALQLPGSSL L RYNGWKHSRS Site 2877
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a SVSQGAQGAA R AALGGYSQAY Site 2734
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ALQSPNSIAR A ASNLAMMCNS Site 2500
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 PLSDEKSATS A TRQWPTPPYD Site 2774
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se DRPALYGVAL C INPQSAAYKN Site 2499
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. QFSGRTYNPT A KNLNIVNRTQ Site 2767
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. ESLPPSSSVN D ISSMSTDQTL Site 2500
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. GRFLPPLFNF K SHELKGVPAE Site 2501
Penicillium.marneffei.IME2 RDVTKIPEDT S SRQWPTPPYG Site 2777
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen --------DE P EADPYDQSFE Site 2500
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a KLCTKPEDLP D NKLGDLNGAC Site 2770
Drosophila.melanogaster.MAK KPAVASSFPW D ESNRTEDEKL Site 2771
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de GANSSGTTLQ W GGPAQSYGKP Site 2804
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ---LPNAFSK  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------C E PELMPTFPHH Site 2241
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin ESLPPSSSVN D ISSMSTDQTL Site 2500
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a ATPSQSSSIN D ISSMSTEQTL Site 2497
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 -----MLKQK T HQGQPNPAIL Site 2067
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p FLNQPIHYPE R RISEDDSEVS Site 2500
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen HLRSPAGTTT L TPSSQALTET Site 2500
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. EEREHAIEEW K ELIYKEVMDW Site 2499
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a KLCTKPEDLP E NKLGDLNGAC Site 2770
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d PDTTSIFALK E VQLQKEANIR Site 2500
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein YKYPPRRISC E DSDIKTMTYQ Site 2500
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. EWRKYTYEEV I NYTPILRKDS Site 2499
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH -------RTR L PNGNALPPLF Site 2501
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD SSSSSTPNSI P VQSPSTTNTT Site 2673
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot QLPRPNSSTE A LKEKENLLIG Site 2500
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str PSTILLVDGE H TVEEWRAMLF Site 2500
Debaryomyces.hansenii.IME2 SVNNTEQYIP N NLAALKEPLE Site 2737
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --TRLPNGRS L PPLFNWLPGE Site 2499
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin GVNRRILAAA A AAAAAVQVNG Site 2499
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ----FTQNRP S VAKLKEEIDQ Site 2251
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de GGPAPKAHPG P PHVHDFHVDR Site 2500
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - --------CK  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -EPVAAPLED D FFDFDRRKEE Site 2500
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - -FADKRFSQH  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg NAAVAGGAGG G GGAGAATAAA Site 2720
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas -----DWTCV Y ASEKDKKKML Site 2047
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. SALQGAQGGA R ALLGGYSQAY Site 2737
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d RIPSLAAIDL H VSSVASHQGA Site 2745
Dictyostelium.discoideum.CDK10..Probable.cyclin.de NNFVQNNQTN Q NNQTNQNNQT Site 2500
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d QQSGFSFFVR H VMREALIHRA Site 2907
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa DLNNPNFNLS R IQSSSELFNL Site 2503
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - --------CK  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ------CEPE L MPTFPHHRNK Site 2500
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac QHPSSSSSVN D VSSMSTDPTL Site 2500
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. ALEHEKLSVD E WKQHIYKEIS Site 2500
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri TDQQQGKRPP L CINPHSAAFK Site 2499
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha ESLPPSSSAN D ISSMSTDQTL Site 2500
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 KSKEPRSINE F KRDYAQSPAG Site 2713
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen EPFDQSFESR E LDIEEWKRQT Site 2500
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar PAKPAFSEVR I HPMSQSSSSG Site 2843
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. NTGSDSNLSL I DSLPLLHFEE Site 2499
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D VHHHKACRHR H HKPNHHAPYD Site 2872
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U HPSQYQAQFA H QTYIPASPTS Site 2793
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d KHLTGLQYLP Q LTSSRILPAL Site 2500
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen GPASPLTTSY N PSSQALTEAQ Site 2500
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro DAKMGSLPQS M AGGRLPSSSN Site 2500
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d LPRPNCSIEA L KEQQNLNLGI Site 2496
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d GGPAPKAHPG P PHIHDFHVDR Site 2500
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi GLNSPNSILK A AKTLYEHYSG Site 2500
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen HARIQAAASP P ANATAASDTN Site 2500
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable QEIKERFTSS L VSDSSAFSKP Site 2750
Aspergillus.fumigatus.IME2 QQDSTPCRRD E KIDHASSNRQ Site 2766
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan SNPHAAYQNP G PSTSLPQSSM Site 2669
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha DSLEREKLSI E EWKKHIYKEI Site 2504
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S DRPALYGVAL C INPQSAAYKN Site 2499
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma HPSQYPAQFA H QTYISASPAS Site 2907
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina PVAEEPFTFA M ELDDLPKERL Site 2500
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d PESVSIFSLK E IQLQKDPGFR Site 2500
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------C E PELMPTFPHH Site 2241
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de RKHLPPGYLP Q LASSTVFPAV Site 2500
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S APEPYDHSVD E REHTVEQWKE Site 2498
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. QTFEGVELET S EWKSNDFSLV Site 2461
Candida.glabrata.IME2 NYNIFENNSE L RSPNTNEAKA Site 2759
Homo.sapiens.MAK..Serine.threonine.protein.kinase. QFSGRTYNPT A KNLNIVNRAQ Site 2767
Schizosaccharomyces.pombe.IME2 TFLDRDFPDF G ITSLAGSLTL Site 2795
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -DEPVSEKIP E DFFDFDKRKD Site 2499
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom PEWTLEGIRG S RAQGLPAHHP Site 2763
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. -----QKAAQ Q AASSSGQGQQ Site 2071
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d LHDTASIFSL K EIQLQKDPGY Site 2501
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d RSRRRQQNQL L PLIPGSHISP Site 2499
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH FELSIRPDLN Q KLIPSHARDA Site 2499
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD SMPVTLSMPE I KSNAKQRKQK Site 2530
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR --------AR L PSGRALPQLE Site 2500
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. PGRPFFHTQP R STPGLIPRPP Site 2785
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act LLADWLEGHG M NPADIESLQR Site 2784
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. DPYDQSFESR D LLIDEWKSLT Site 2500
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a FHSPVGSPLK S IQATLTPSAM Site 2818
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. DSFDDVDRTL E EWKRVTYKEV Site 2504
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U ASAQYPHQFA A QSYIGASRGS Site 2907
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. QLPDEESLFA V SGVKLKPEMC Site 2500
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD FPIAEYRNRL Y NDIIKKKKEE Site 2500
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen HARIQAAAST P TNATAASDAN Site 2500
Drosophila.melanogaster.GSK3H..Putative.glycogen.s GDENDYDYDD G GQCNSTYISD Site 2723
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD SLNSEMPDFP N YKSRQNQTDR Site 2499
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 SQIPRGFMVP L ISDNDTTTST Site 2749
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a DEPIAEAPFK F DMELDDLPKE Site 2500
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. QLPDEESLFT V SGVRLKPEMC Site 2500
Cryptococcus.neoformans.IME2 TSASSASLQY Q QSAQTLPSFS Site 2806
Homo.sapiens.HIPK4..Homeodomain.interacting.protei DCTLESVRGP R AQGLPPRRSH Site 2764
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 SDRSKSSAVG K ENVDAFYENV Site 2686
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom APAQYQHQFA T QSYIGSSRGS Site 2907
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A VQQAQQAAAA A AAAQQQQQQQ Site 2705
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep RGGKHSRQRM Q PPHEFTVDRP Site 2500
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. PRRRTQGLQY L PQLASSNMSP Site 2499
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. VPVLRPLKCI P ASKKTDPQKD Site 2673
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ---------R  
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a LLADWLEGHG M NPADIESLQR Site 2784
Mus.musculus.ICK..Serine.threonine.protein.kinase. PGRPFFHTQP R STPGLIPRPP Site 2785
Saccharomyces.castelli.IME2 LPFPDVAPRT F EIPHLGPSEE Site 2764
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep LPRPNCPVEA L KEPANPTVAT Site 2499
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. TDMSSIFTVP N VRLQPEAGES Site 2500
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly DGKPLPPLFD F TEDELRACTP Site 2501
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS -------NTY L LDGESTDEDD Site 2500
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli QLPRPNSSTE A LKEKENLLIG Site 2499
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho TSMFEYLAPP R RKGSQITQQS Site 2499
Homo.sapiens.HIPK2..Homeodomain.interacting.protei HPSQYPAQFA H QTYISASPAS Site 2907
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 EPRSVGVNGT S GDKKKSNQVG Site 2706
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin AGNQQDFHHQ Q QQQQQQQQQQ Site 2521
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G TATSQDHAHS S TSGNHYSGGA Site 2501
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de PDTTSIFALK E IQLQKEASLR Site 2500
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d PESVSIFSLK E IQLQKDPGFR Site 2500
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA DSLEHEKLSI E EWKKHIYKEI Site 2504
Candida.albicans.SSN3..Serine.threonine.protein.ki QVHQMQQQIH S QQLQSHGANS Site 2672
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF PAARGSVRER M EPPSGVGGQK Site 2716
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA TALIPPHVSQ N SSSSTAPHDT Site 2500
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara SYDNATLPLE E WKRLSFKEVR Site 2462
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de SANQKTNEQH P SSTSLHQQST Site 2743
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PTIHQTQFKP I FPSHSYITAS Site 2907
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d PEGGLGYSQL G DDDLKETGFH Site 2502
Candida.dubliniensis.IME2 MEPRRAGNGT S DLKKKQSKAA Site 2705
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a ATPSQSSSIN D ISSMSTEHTL Site 2500
Aspergillus.niger.IME2 LAEEKTDANT S RQWPTPPYED Site 2777
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge EPYDQSFESR E LDIEEWKRLT Site 2500
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d KTESSKIPTL L NVDQNQEKQE Site 2766
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. TDMSSIFTVP N VRLQPEAGES Site 2500
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 SIKSEDLLNP D TFFTEGFHDS Site 2761
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. YAPPPLPYDH N MDVEQNVDSW Site 2263
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P ELFNFTRHVP P HQRSVLAARG Site 2501
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. -----ARLPS G RPLPTLEMDG Site 2500
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. DSFDDVDRTL D EWKRVTYKEV Site 2504
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 SSSSNRIPRS F AVPRISEECS Site 2738
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 FNSMPDFTPR N FLIPTLKKSR Site 2722
Schizosaccharomyces.japonicus.b.IME2 KSIYYTPGFP S NQETPIRNAR Site 2796
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - --------KD  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a FHSPVGSPLK S IQATLTPSAM Site 2818
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - --------YK  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST QNLRIFDFDV E TELGHVPLVE Site 2500
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk EPYDDSFDNV N LPLEEWKRLT Site 2500
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de TDSSKIPTLL S MDPNQEKQEG Site 2773
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act REHSVEEWKE L IYKEVLEWEE Site 2500
Candida.albicans.IME2 MEPRRAGNEA H DLKKKSSKVA Site 2705
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. DPYDQSFESR D LLIDEWKSLT Site 2500
Kluyveromyces.lactis.IME2 ERAVQQRVLD C LLDPSEHASQ Site 2772
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina LLADWLEGHG M NPADIESLQR Site 2784
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. ESLPPSSAVN D ISSMSTDQTL Site 2500
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. ESVEAKERTL E EWKELTYQEV Site 2504
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 -----MLKQK T HQGQPNPAIL Site 2067
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. ESVEAKERTL E EWKELTYQEV Site 2504
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - -----AQIKR  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME ITGNKKSHGA G GSSASTGFVL Site 2674
Neurospora.crassa.IME2 QSLEPKKRSS E YKWPTPPYND Site 2790
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar -------CEP E LMPTFPHHRN Site 2243
Ashbya.gossypii.IME2 QIPRDFIMEP T TIPQHDILPP Site 2779
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi GLNSPNSILK T AKTLYERYNC Site 2500
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p KINQITTDLK L LEFDENVELG Site 2500
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace ALAHTHRCHI H RCHTRKRTTL Site 2748
Schizosaccharomyces.pombe.b.IME2 SGMEMTSVLE Y STPNPAEVQN Site 2733
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a DEPIAEAPFK F DMELDDLPKE Site 2499
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PTIHQTQYKP I FPPHSYIAAS Site 2907
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas -----VSSSD L TGRQDTSRMS Site 2500
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac REHTIEEWKE L IYKEVMDLEE Site 2509
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable YADEILQVLE A NAQPGLQEDQ Site 2765
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 NVWVRSEELE C PVYPGLQTNS Site 2776
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ANALGGLGVN R RILAAAAAAA Site 2500
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly APQLNHKLVP S HMRPVLASKG Site 2501
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk FELSIRPDLN Q KLIPSHARDA Site 2499
Species Residue at Site 4894
in 'msaprobs'
muscle

The residue for every species at site 4894 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo QQKGNRVPLC I NPQSAAFKSF Site 2499
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 07:57, May 30th 2020
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