cmgc Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a Site:

Site 4888 in Alignment 'msaprobs'


Similarity to Other Alignments

What percentage of the residues at this site are inferred to be a single site (i.e. homologous) in the alignments produced by other methods? A value of 100% indicates that the existence of site 4888 is robust across multiple methods. Values less than 100% indicate that other alignment methods made different homology inferences.

Similarity of Site 4888 in 'msaprobs'
to Sites in 'muscle'

What percentage of the residues at this site in msaprobs are inferred to be a single site (i.e. homologous) in the alignments produced by muscle? A value of 100% indicates that the existence of site 4888 is reproduced using the muscle method. Values less than 100% indicate that muscle made different homology inferences for the residues at this site.


Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.octosporus.IME2 EKPSIFSSDI L EHDFPDFCVT Site 2801
Dictyostelium.discoideum.SKY1..sp.Q86A12.SKY1_DICD ---------- - ----------  
Danio.rerio.CDK1 ---------- - ----------  
Medicago.sativa.MAPK3..sp.Q07176.MMK1_MEDSA.Mitoge -----SDEPV C MTPFSFDFEQ Site 2493
Xenopus.laevis.CDK5..sp.P51166.CDK5_XENLA.Cyclin.d ---------- - ----------  
Oikopleura.dioica.CDK5..tr.J9JF51.J9JF51_OIKDI.CDK ---------- - ----------  
Candida.guilliermondii.IME2 PRTDHTNNLE I DEAMNPLNPN Site 2494
Zea.mays.CK1a..gi.413939414.gb.AFW73965.1..putativ ---------- - RATSLSRAAV  
Chlamydomonas.reinhardtii.LF4 GGGGGGAVGV G GVGVNKYKAN Site 2790
Schizosaccharomyces.pombe.GSK3.1..Protein.kinase.g FNFNLAELSI R PNLNKAILPP Site 2494
Drosophila.melanogaster.CK1c...gi.7292798.gb.AAF48 ---------- - MLKQKTHQGQ  
Saccharmomyces.cerevisiae.CK1..gi.433622.emb.CAA42 ---------- - NAQPTANDEQ  
Homo.sapiens.CDK8..Cyclin.dependent.kinase.8.OS.Ho TSDYQRSNPH A AYPNPGPSTS Site 2524
Schizosaccharomyces.octosporus.b.IME2 VRRNHGAPDF Q ASRSISCQAY Site 2771
Candida.albicans.MAPK3..Extracellular.signal.regul -------DEP I SDKIPEDFFD Site 2493
Arabidopsis.thaliana.CK2a2..sp.Q08466.CSK22_ARATH. ---------- - ----------  
Galdieria.suphuraria.CK1..gi.545709990.ref.XP_0057 ---------- - SKQNVVSNSP  
Suberites.domuncula.JNK..Stress.activated.protein. --------AE V HAPPPKRYDH Site 2239
Homo.sapiens.CLK3..Dual.specificity.protein.kinase ---------- - ----------  
Aedes.aegypti.CDK1 ---------- - ----------  
Mus.musculus.CLK1..sp.P22518.CLK1_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CLK2..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.HIPK1..Homeodomain.interacting.protei LTSASVAPAQ Y QHQFATQSYI Site 2901
Gallus.gallus.CDKL1..tr.E1C5K5.E1C5K5_CHICK.Unchar PAKLTRKHVP G FQYLPQLSSS Site 2494
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Nosema.ceranae.CDK1 ---------- - ----------  
Homo.sapiens.CSK2a2..sp.P19784.CSK22_HUMAN.Casein. ---------- - ----------  
Drosophila.melanogaster.MAPK3..sp.P40417.ERKA_DROM ---DEPVAEV P FRINMENDDI Site 2491
Strongylocentrotus.purpuratus.CDK1 ---------- - ----------  
Zea.mays.CK1b..gi.226502995.ref.NP_001148106.1..ca ---------- - DNADAPMDHA  
Drosophila.melanogaster.CDK1 ---------- - ----------  
Oxytricha.trifallax.CK..gi.403365855.gb.EJY82718.1 ---------- - LNNKRLESNA  
Dictyostelium.discoideum.CK1..sp.Q556Y4.KC1_DICDI. ---------- - TTTTSSSNPN  
Arabidopsis.thaliana.SRPK1..tr.Q9FYB4.Q9FYB4_ARATH ---------- - ----------  
Homo.sapiens.CDK18..sp.Q07002.CDK18_HUMAN.Cyclin.d ---VHQLEDT A SIFSLKEIQL Site 2495
Crassostrea.gigas.PFTAIRE..tr.K1Q2C8.K1Q2C8_CRAGI. QQFSLVQNNF H WYTTVLIGTQ Site 2496
Tetradon.nigroviridis.MAPK10..tr.H3CCC1.H3CCC1_TET AAVNSSESLP P SSSINDISSM Site 2493
Homo.sapiens.CDKL2..Cyclin.dependent.kinase.like.2 KCSIPFVKPN R HSPSGIYNIN Site 2732
Takifugu.rubripes.MAPK10..tr.H2U861.H2U861_TAKRU.U AAVNSSESPP P SSSINDISSM Site 2493
Homo.sapiens.MAPK13..sp.O15264.MK13_HUMAN.Mitogen. AQQPFDDSLE H EKLTVDEWKQ Site 2498
Homo.sapiens.NLK..sp.Q9UBE8.NLK_HUMAN.Serine.threo HQFILEQQKG N RVPLCINPQS Site 2493
Bombus.terrestris.CDK1 ---------- - ----------  
Homo.sapiens.SRSF.GN.SRPK1.PE.1.SV.2 ---------- - ----------  
Gallus.gallus.CDKL2..tr.E1C431.E1C431_CHICK.Unchar PRYLKKENKT V SESRVPSLAA Site 2746
Xenopus.laevis.MAPK8.sp.Q8QHK8.MK08_XENLA.Mitogen. AAVTDGSQAH T SSSSGDASSM Site 2493
Homo.sapiens.CDK12..sp.Q9NYV4.CDK12_HUMAN.Cyclin.d PGTTGASSSG A GLHWGGPTQS Site 2800
Mus.musculus.MOK..MAPK.MAK.MRK.overlapping.kinase. GANGKVPVLR P LKCAAVNKKT Site 2668
Trypanosoma.brucei.GSK3..Glycogen.synthase.kinase. ---------- - TKLPSGNPLP  
Leishmania.infantum.GSK3..tr.A4HXQ3.A4HXQ3_LEIIN.G ---------- - TKLPNNKDLP  
Drosophila.melanogaster.CK1a...gi.22832152.gb.AAN0 ---------- - MLKQKTHQGQ  
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Arabidopsis.thaliana.CK1..gi.332659757.gb.AEE85157 ---------- - PRNSPGEAGK  
Drosophila.melanogaster.HIPK..tr.M9PDR2.M9PDR2_DRO IPSHPLPAHI Q IPTQYSQFGP Site 2900
Arabidopsis.thaliana.CK2a..sp.Q08467.CSK21_ARATH.C ---------- - ----------  
Xenopus.tropicalis.NLK1..tr.B0JZD9.B0JZD9_XENTR.Nl HQFILEQQKG N RVPLCINPQS Site 2493
Homo.sapiens.CDKL1..Cyclin.dependent.kinase.like.1 RKHHCFTETS K LQYLPQLTGS Site 2494
Homo.sapiens.HIPK3..Homeodomain.interacting.protei PRLLPSPTIH Q TQYKPIFPPH Site 2901
Homo.sapiens.CDK11A..Cyclin.dependent.kinase.11A.O GTSPRPPEGG L GYSQLGDDDL Site 2496
Danio.rerio.CDKL5..tr.B9X2H6.B9X2H6_DANRE.Cyclin.d VSALNRAEGA P YPDQLANKGG Site 2892
Mus.musculus.CLK2..sp.O35491.CLK2_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.CDK11B..Cyclin.dependent.kinase.11B.O GTSPRPPEGG L GYSQLGDDDL Site 2496
Naegleria.gruberi.LF4 TTTYNNFQSN K APPIFQNNVH Site 2719
Saccharomyces.bayanus.IME2 ASLGDSFNSM P DFTPRNFLIP Site 2716
Mus.musculus.CSK2a2..sp.O54833.CSK22_MOUSE.Casein. ---------- - ----------  
Danio.rerio.MAPK12..sp.O42376.MK12_DANRE.Mitogen.a ETEAPPYDHS L DEADQSLEQW Site 2259
Dictyostelium.discoideum.CDK7..Cyclin.dependent.ki -VLAQVQQQL L QKQQQQQQQQ Site 2494
Dictyostelium.discoideum.DYRK1..Probable.serine.th ---------- - ----------  
Mus.musculus.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.DYRK2..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDKL5..sp.Q3UTQ8.CDKL5_MOUSE.Cyclin.d PTPKGRPALQ L PGSSLLRYNG Site 2871
Mus.musculus.MAPK15.sp.Q80Y86.MK15_MOUSE.Mitogen.a RRMFGISVSQ G AQGAARAALG Site 2728
Danio.rerio.TTK..sp.Q8AYG3.TTK_DANRE.Dual.specific ILNELVALQS P NSIARAASNL Site 2494
Mus.musculus.DYRK4..Dual.specificity.tyrosine.phos ---------- - ----------  
Aspergillus.nidulans.IME2 APNRRLPLSD E KSATSATRQW Site 2768
Mus.musculus.CDC7...sp.Q9Z0H0.CDC7_MOUSE.Cell.divi ---------- - ----------  
Caenorhabditis.elegans.NLK..sp.Q9U9Y8.NLK_CAEEL.Se MYQFVMDRPA L YGVALCINPQ Site 2493
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.MAK..Serine.threonine.protein.kinase. TKTGRGQFSG R TYNPTAKNLN Site 2761
Homo.sapiens.CDK2..sp.P24941.CDK2_HUMAN.Cyclin.dep ---------- - ----------  
Xenopus.tropicalis.MAPK10..tr.F7CYE3.F7CYE3_XENTR. AAVNSSESLP P SSSVNDISSM Site 2493
Glycine.max.GSK3..tr.C7AE95.C7AE95_SOYBN.Glycogen. -SRLPNGRFL P PLFNFKSHEL Site 2495
Penicillium.marneffei.IME2 NTPVRQRDVT K IPEDTSSRQW Site 2771
Danio.rerio.MAPK14b..sp.Q9DGE1.MK14B_DANRE.Mitogen ---------- - ---DEPEADP  
Homo.sapiens.MAPK4..sp.P31152.MK04_HUMAN.Mitogen.a FISRALKLCT K PEDLPDNKLG Site 2764
Drosophila.melanogaster.MAK PNAQKEKPAV A SSFPWDESNR Site 2765
Schizosaccharomyces.pombe.PRP4..sp.Q07538.PRP4_SCH ---------- - ----------  
Mus.muculus.PRP4..sp.Q61136.PRP4B_MOUSE.Serine.thr ---------- - ----------  
Mus.musculus.CDK12.sp.Q14AX6.CDK12_MOUSE.Cyclin.de LGPGTTGANS S GTTLQWGGPA Site 2798
Dictyostelium.discoideum.CDK8..Probable.cyclin.dep ---------- - ---------L  
Mus.musculus.CDK10..sp.Q3UMM4.CDK10_MOUSE.Cyclin.d ---------- - ----CEPELM  
Homo.sapiens.MAPK10..Mitogen.activated.protein.kin AAVNSSESLP P SSSVNDISSM Site 2493
Homo.sapiens.MAPK9..sp.P45984.MK09_HUMAN.Mitogen.a AAVSSNATPS Q SSSINDISSM Site 2491
Homo.sapiens.CLK1..Dual.specificity.protein.kinase ---------- - ----------  
Homo.sapiens.CDC7..sp.O00311.CDC7_HUMAN.Cell.divis ---------- - ----------  
Drosophila.melanogaster.CK1d..gi.272506076.gb.ACZ9 ---------- - MLKQKTHQGQ  
Candida.parapsilosis.IME2 ---------- - ----------  
Schizosaccharomyces.pombe.SSN3..Serine.threonine.p -WTTSPFLNQ P IHYPERRISE Site 2494
Homo.sapiens.GSK3a..sp.P49840.GSK3A_HUMAN.Glycogen AILIPPHLRS P AGTTTLTPSS Site 2494
Gallus.gallus.MAPK9..sp.P79996.MK09_CHICK.Mitogen. IYDAQLEERE H AIEEWKELIY Site 2493
Homo.sapiens.CK2a..sp.P68400.CSK21_HUMAN.Casein.ki ---------- - ----------  
Taeniopygia.guttata.CLK4..tr.H0YSC9.H0YSC9_TAEGU.U ---------- - ----------  
Mus.musculus.MAPK4..sp.Q6P5G0.MK04_MOUSE.Mitogen.a FISRALKLCT K PEDLPENKLG Site 2764
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK16..sp.Q04735.CDK16_MOUSE.Cyclin.d ---HKLPDTT S IFALKEVQLQ Site 2494
Homo.sapiens.CSK2a1..sp.P68400.CSK21_HUMAN.Casein. ---------- - ----------  
Yarrowia.lipolytica.SSN3..Serine.threonine.protein VFERQEYKYP P RRISCEDSDI Site 2494
Xenopus.tropicalis.MAPK13..tr.B1WBJ0.B1WBJ0_XENTR. EKLSVEEWRK Y TYEEVINYTP Site 2493
Homo.sapiens.DYR1B..Dual.specificity.tyrosine.phos ---------- - ----------  
Caenorhabditis.elegans.CSK2a..sp.P18334.CSK2A_CAEE ---------- - ----------  
Thalassiosira.pseudonona.GSK3..tr.B8CFP1.B8CFP1_TH ---------- - --RTRLPNGN  
Dictyostelium.discoideum.GSK3..sp.P51136.GSK3_DICD ASPSTTSSSS S TPNSIPVQSP Site 2530
Candida.orthopsilosis.IME2 ---------- - ----------  
Danio.rerio.CDK7..tr.Q6NWC5.Q6NWC5_DANRE.Cdk7.prot --TPGPQLPR P NSSTEALKEK Site 2494
Ancylostoma.caninum.MAPK8.sp.Q9U6D2.JNK1_ANCCA.Str SCSSAGPSTI L LVDGEHTVEE Site 2494
Debaryomyces.hansenii.IME2 DITNNDSVNN T EQYIPNNLAA Site 2731
Volvos.carteri.GSK3..tr.D8TP98.D8TP98_VOLCA.Putati --------TR L PNGRSLPPLF Site 2493
Ashbya.gossypii.SSN3..Serine.threonine.protein.kin SSIGGLGVNR R ILAAAAAAAA Site 2493
Caenorhabditis.briggsae.CDK2..tr.A8XL31.A8XL31_CAE ---------- F TQNRPSVAKL Site 2240
Caenorhabditis.briggsae.CDK1 ---------- - ----------  
Drosophila.melanogaster.CSK2a..sp.P08181.CSK2A_DRO ---------- - ----------  
Mus.musculus.CDK20.sp.Q9JHU3.CDK20_MOUSE.Cyclin.de PIPQRPGGPA P KAHPGPPHVH Site 2494
Mus.musculus.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Gallus.gallus.CDK6..tr.Q90771.Q90771_CHICK.Cyclin. ---------- - ----------  
Monosiga.brevicollis.CDK1 ---------- - ----------  
Saccharomyces.cerevisiae.SKY1 ---------- - ----------  
Komagataella.pastoris.MAPK3..tr.F2QYY4.F2QYY4_PICP -------EPV A APLEDDFFDF Site 2494
Petromyzon.marinus.CDKL3..tr.S4RCQ7.S4RCQ7_PETMA.U ---------- - -------FAD  
Drosophila.melanogaster.GSK3..Protein.kinase.shagg VAAGGANAAV A GGAGGGGGAG Site 2714
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Plasmodium.falciparum.CK1..sp.Q8IHZ9.KC1_PLAF7.Cas ---------- - DWTCVYASEK  
Homo.sapiens.MAPK15..sp.Q8TD08.MK15_HUMAN.Mitogen. RRMFSTSALQ G AQGGARALLG Site 2731
Mus.musculus.CDKL2..sp.Q9QUK0.CDKL2_MOUSE.Cyclin.d KCLSESRIPS L AAIDLHVSSV Site 2739
Dictyostelium.discoideum.CDK10..Probable.cyclin.de KQNNNFNNFV Q NNQTNQNNQT Site 2494
Homo.sapiens.CDKL5..sp.O76039.CDKL5_HUMAN.Cyclin.d AFSCPTQQSG F SFFVRHVMRE Site 2901
Ajellomyces.capsulatus.CDK1 ---------- - ----------  
Dictystelium.discoideum.MAPK3..Extracellular.signa QAPYYTDLNN P NFNLSRIQSS Site 2497
Homo.sapiens.CDK6..sp.Q00534.CDK6_HUMAN.Cyclin.dep ---------- - ----------  
Bos.taurus.CDK10..sp.Q2TBL8.CDK10_BOVIN.Cyclin.dep ---------- - -CEPELMPTF  
Homo.sapiens.MAPK8.sp.P45983.MK08_HUMAN.Mitogen.ac AVINGSQHPS S SSSVNDVSSM Site 2494
Mus.musculus.MAPK13..sp.Q9Z1B7.MK13_MOUSE.Mitogen. QQPFDDALEH E KLSVDEWKQH Site 2494
Drosophila.melanogaster.CDK4..tr.Q94877.Q94877_DRO ---------- - ----------  
Xenopus.tropicalis.NLK2..sp.B1H3E1.NLK2_XENTR.Seri LVHRFITDQQ Q GKRPPLCINP Site 2493
Gallus.gallus.MAPK10..tr.E1C8C5.E1C8C5_CHICK.Uncha AAVNSSESLP P SSSANDISSM Site 2493
Saccharomyces.cerevisiae.CDK1 ---------- - ----------  
Lodderomyces.elongisporus.IME2 EKFKSDKSKE P RSINEFKRDY Site 2707
Danio.rerio.MAPK14a..sp.Q9DGE2.MK14A_DANRE.Mitogen -DEPEAEPFD Q SFESRELDIE Site 2494
Xenopus.tropicalis.CLK2..tr.F7C0E3.F7C0E3_XENTR.Un ---------- - ----------  
Gallus.gallus.CDKL5..tr.E1BTX0.E1BTX0_CHICK.Unchar QPLPSQPAKP A FSEVRIHPMS Site 2837
Kluyveromyces.lactis.GSK3..tr.O60042.O60042_KLULC. -----SNTGS D SNLSLIDSLP Site 2493
Drosophila.melanogaster.MAPK15..tr.Q9W354.Q9W354_D DQEELPVHHH K ACRHRHHKPN Site 2866
Homo.sapiens.CLK4..Dual.specificity.protein.kinase ---------- - ----------  
Xenopus.tropicalis.HIPK2..tr.F7A386.F7A386_XENTR.U LPSPSLHPSQ Y QAQFAHQTYI Site 2787
Mus.musculus.CDKL1..sp.Q8CEQ0.CDKL1_MOUSE.Cyclin.d TLRQSRKHLT G LQYLPQLTSS Site 2494
Mus.musculus.GSK3a..sp.Q2NL51.GSK3A_MOUSE.Glycogen HLRSPAGPAS P LTTSYNPSSQ Site 2494
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.CDK1 ---------- - ----------  
Homo.sapiens.CDK4..sp.P11802.CDK4_HUMAN.Cyclin.dep ---------- - ----------  
Cryptococcus.neoformans.SSN3..Serine.threonine.pro THEDNGDAKM G SLPQSMAGGR Site 2494
Salmo.salar.CDK1 ---------- - ----------  
Xenopus.Laevis.CDK7..sp.P20911.CDK7_XENLA.Cyclin.d -TPGNLLPRP N CSIEALKEQQ Site 2490
Homo.sapiens.CDK20..sp.Q8IZL9.CDK20_HUMAN.Cyclin.d PIPQRLGGPA P KAHPGPPHIH Site 2494
Homo.sapiens.TTK..sp.P33981.TTK_HUMAN.Dual.specifi VLGQLVGLNS P NSILKAAKTL Site 2494
Mus.musculus.GSK3b..sp.Q9WV60.GSK3B_MOUSE.Glycogen TILIPPHARI Q AAASPPANAT Site 2494
Homo.sapiens.SGK71..sp.Q8NE28.SGK71_HUMAN.Probable SMKALLQEIK E RFTSSLVSDS Site 2744
Aspergillus.fumigatus.IME2 DGVSFGQQDS T PCRRDEKIDH Site 2760
Danio.rerio.CDK8..Cyclin.dependent.kinase.8.OS.Dan TSDYQRSNPH A AYQNPGPSTS Site 2524
Oryzias.latipes.CLK2b.tr.H2M4E3.H2M4E3_ORYLA.Uncha ---------- - ----------  
Gallus.gallus.MAPK13..tr.E1C7W3.E1C7W3_CHICK.Uncha AQQSYDDSLE R EKLSIEEWKK Site 2498
Caenorhabditis.briggsae.NLK..sp.A8XSC1.NLK_CAEBR.S MYQFVMDRPA L YGVALCINPQ Site 2493
Mus.musculus.HIPK2.sp.Q9QZR5.HIPK2_MOUSE.Homeodoma LPSPTIHPSQ Y PAQFAHQTYI Site 2901
Homo.sapiens.MAPK3..Mitogen.activated.protein.kina ----DEPVAE E PFTFAMELDD Site 2494
Mus.musculus.CDK17..sp.Q8K0D0.CDK17_MOUSE.Cyclin.d ---HALPESV S IFSLKEIQLQ Site 2494
Homo.sapiens.CDK10..Cyclin.dependent.kinase.10.OS. ---------- - ----CEPELM  
Danio.rerio.CDKL1..sp.Q6AXJ9.CDKL1_DANRE.Cyclin.de KRTRQPRKHL P PGYLPQLASS Site 2494
Drosophila.melanogaster.JNK..sp.P92208.JNK_DROME.S EEVDAPAPEP Y DHSVDEREHT Site 2492
Petromyzon.marinus.MAPK13..tr.S4RVM7.S4RVM7_PETMA. EAEPYDQTFE G VELETSEWKS Site 2261
Candida.glabrata.IME2 FGSDNLNYNI F ENNSELRSPN Site 2753
Homo.sapiens.MAK..Serine.threonine.protein.kinase. TKTGRGQFSG R TYNPTAKNLN Site 2761
Schizosaccharomyces.pombe.IME2 SSAISSTFLD R DFPDFGITSL Site 2789
Scheffersomyces.stipitis.MAPK3..tr.A3GF15.A3GF15_P -------DEP V SEKIPEDFFD Site 2493
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Glossina.morsitans.CDK5..sp.Q2PQN9.CDK5_GLOMM.Cycl ---------- - ----------  
Mus.musculus.HIPK4..sp.Q3V016.HIPK4_MOUSE.Homeodom GEWLSEPEWT L EGIRGSRAQG Site 2757
Homo.sapiens.CK1..gi.68303575.ref.NP_001020276.1.. ---------- - QKAAQQAASS  
Mus.musculus.CDK18..sp.Q04899.CDK18_MOUSE.Cyclin.d ---VHQLHDT A SIFSLKEIQL Site 2495
Mus.musculus.CDKL4..sp.Q3TZA2.CDKL4_MOUSE.Cyclin.d KARSEGRSRR R QQNQLLPLIP Site 2493
Branchiostoma.floridae.CDK1 ---------- - ----------  
Gallus.gallus.CLK2..tr.Q5ZJ82.Q5ZJ82_CHICK.Unchara ---------- - ----------  
Schizosaccharomyces.pombe.GSK3..sp.Q10452.GSK3_SCH LFNFSPFELS I RPDLNQKLIP Site 2493
Oikopleura.dioica.CDKL2..tr.E4XDC6.E4XDC6_OIKDI.CD HNSGFSSMPV T LSMPEIKSNA Site 2523
Caenorhabditis.briggsae.GSK3..sp.A8X5H5.GSK3_CAEBR ---------- - ---ARLPSGR  
Taeniopygia.guttata.CDK10..tr.H0ZC86.H0ZC86_TAEGU. ---------- - ----------  
Homo.sapiens.ICK..Serine.threonine.protein.kinase. KAMRPHPGRP F FHTQPRSTPG Site 2779
Mus.musculus.CLK3..sp.O35492.CLK3_MOUSE.Dual.speci ---------- - ----------  
Mus.musculus.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Mus.musculus.CDK2..sp.P97377.CDK2_MOUSE.Cyclin.dep ---------- - ----------  
Bos.taurus.MAPK7..sp.A5PKJ4.MK07_BOVIN.Mitogen.act ASLSASLLAD W LEGHGMNPAD Site 2778
Homo.sapiens.MAPK14..sp.Q16539.MK14_HUMAN.Mitogen. -DEPVADPYD Q SFESRDLLID Site 2494
Lachancea.thermotolerans.SKY1 ---------- - ----------  
Mus.musculus.MAPK6..sp.Q61532.MK06_MOUSE.Mitogen.a SIGTPQFHSP V GSPLKSIQAT Site 2812
Dictyostelium.discoideum.CDK1 ---------- - ----------  
Mus.musculus.MAPK12..sp.O08911.MK12_MOUSE.Mitogen. KAQKYDDSFD D VDRTLEEWKR Site 2498
Xenopus.tropicalis.IME2 ---------- - ----------  
Xenopus.tropicalis.HIPK1..tr.F6T404.F6T404_XENTR.U LTSANVASAQ Y PHQFAAQSYI Site 2901
Gallus.gallus.CSK2a..sp.P21868.CSK21_CHICK.Casein. ---------- - ----------  
Xenopus.laevis.CDK2..sp.P23437.CDK2_XENLA.Cyclin.d ---------- - ----------  
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Gallus.gallus.CDK3..tr.F1NA68.F1NA68_CHICK.Unchara ---------- - ----------  
Mus.musculus.CDK15..Cyclin.dependent.kinase.15.OS. ---QLYQLPD E ESLFAVSGVK Site 2494
Dictyostelium.discoideum.MAPK1.sp.Q54QB1.ERK2_DICD IDDGQKFPIA E YRNRLYNDII Site 2494
Homo.sapiens.DYR1A..Dual.specificity.tyrosine.phos ---------- - ----------  
Homo.sapiens.GSK3b..sp.P49841.GSK3B_HUMAN.Glycogen TILIPPHARI Q AAASTPTNAT Site 2494
Drosophila.melanogaster.GSK3H..Putative.glycogen.s NLEEDVGDEN D YDYDDGGQCN Site 2717
Oikopleura.dioica.CDK10..tr.J7PN91.J7PN91_OIKDI.CD ------SLNS E MPDFPNYKSR Site 2493
Encephalitozoon.cuniculi.CDK1 ---------- - ----------  
Saccharomyces.kluyveri.IME2 SMDSGGSQIP R GFMVPLISDN Site 2743
Mus.musculus.CLK4..sp.O35493.CLK4_MOUSE.Dual.speci ---------- - ----------  
Homo.sapiens.MAPK1..sp.P28482.MK01_HUMAN.Mitogen.a ------DEPI A EAPFKFDMEL Site 2494
Homo.sapiens.CDK15..Cyclin.dependent.kinase.15.OS. ---QLYQLPD E ESLFTVSGVR Site 2494
Cryptococcus.neoformans.IME2 RRDKRTTSAS S ASLQYQQSAQ Site 2800
Homo.sapiens.HIPK4..Homeodomain.interacting.protei EWLSEPDCTL E SVRGPRAQGL Site 2758
Mus.musculus.SRSF.sp.O70551.SRPK1_MOUSE.SRSF.prote ---------- - ----------  
Candida.lusitaniae.IME2 IDSDMDSDRS K SSAVGKENVD Site 2680
Mus.musculus.HIPK1..sp.O88904.HIPK1_MOUSE.Homeodom LTSASVAPAQ Y QHQFATQSYI Site 2901
Aedes.aegypti.CDK8..Cyclin.dependent.kinase.8.OS.A NQQDYQVQQA Q QAAAAAAAAQ Site 2699
Danio.rerio.CDK20.sp.A8WIP6.CDK20_DANRE.Cyclin.dep ELPIPQRGGK H SRQRMQPPHE Site 2494
Latimeria.chalumnae.CDKL1..tr.H3BGX9.H3BGX9_LATCH. RRHEKAPRRR T QGLQYLPQLA Site 2493
Gallus.gallus.CDK2 ---------- - ----------  
Emericella.nidulans.CDK1 ---------- - ----------  
Homo.sapiens.MOK..MAPK.MAK.MRK.overlapping.kinase. SGTNGRVPVL R PLKCIPASKK Site 2530
Homo.sapiens.CDK1 ---------- - ----------  
Candida.albicans.CDK1 ---------- - ----------  
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Danio.rerio.CK2a1..gi.40538752.ref.NP_571327.1..ca ---------- - ----------  
Mus.musculus.MAPK7..sp.Q9WVS8.MK07_MOUSE.Mitogen.a ASLSASLLAD W LEGHGMNPAD Site 2778
Mus.musculus.ICK..Serine.threonine.protein.kinase. KAVRPHPGRP F FHTQPRSTPG Site 2779
Saccharomyces.castelli.IME2 EAGNTSLPFP D VAPRTFEIPH Site 2758
Salmo.salar.CLK4..tr.B5X280.B5X280_SALSA.Dual.spec ---------- - ----------  
Mus.musculus.CDK7..sp.Q03147.CDK7_MOUSE.Cyclin.dep -TPGCQLPRP N CPVEALKEPA Site 2493
Mus.musculus.CDK14..Cyclin.dependent.kinase.14.OS. -RLWELTDMS S IFTVPNVRLQ Site 2494
Micromonas.RCC299.GSK3..tr.C1ED07.C1ED07_MICSR.Gly --ARTPDGKP L PPLFDFTEDE Site 2495
Saccharomyces.cerevisiae.CDC7..sp.P06243.CDC7_YEAS ---------- - --NTYLLDGE  
Carassius.auratus.CDK7..sp.P51953.CDK7_CARAU.Cycli --TPGPQLPR P NSSTEALKEK Site 2493
Homo.sapiens.CDK9..Cyclin.dependent.kinase.9.OS.Ho MLSTHLTSMF E YLAPPRRKGS Site 2493
Homo.sapiens.HIPK2..Homeodomain.interacting.protei LPSPTIHPSQ Y PAQFAHQTYI Site 2901
Acyrthosiphon.pisum.CDK1 ---------- - ----------  
Candida.tropicalis.CDK1 TRESEKEPRS V GVNGTSGDKK Site 2700
Drosophila.melanogaster.CDK8..Cyclin.dependent.kin RVRLSGAGNQ Q DFHHQQQQQQ Site 2515
Suberites.domuncula.GSK3..tr.Q4H118.Q4H118_SUBDO.G PSSTSSTATS Q DHAHSSTSGN Site 2495
Spodoptera.frugiperda.CSK2a..sp.O76484.CSK2A_SPOFR ---------- - ----------  
Homo.sapiens.CDK16.sp.Q00536.CDK16_HUMAN.Cyclin.de ---HKLPDTT S IFALKEIQLQ Site 2494
Arabidopsis.thaliana.CSK2a1..gi.30698301.ref.NP_20 ---------- - ----------  
Homo.sapiens.CDK17..sp.Q00537.CDK17_HUMAN.Cyclin.d ---HALPESV S IFSLKEIQLQ Site 2494
Meleagris.gallopavo.MAPK13..tr.G1MQ62.G1MQ62_MELGA AQQAYDDSLE H EKLSIEEWKK Site 2498
Candida.albicans.SSN3..Serine.threonine.protein.ki QNVQIQQVHQ M QQQIHSQQLQ Site 2528
Micromonas.sp.RCC299.LF4..long.flagella.protein.LF GSYKSKPAAR G SVRERMEPPS Site 2710
Lytechinus.variegatus.GSK3..tr.Q6IUG5.Q6IUG5_LYTVA SKPSLRTALI P PHVSQNSSSS Site 2494
Danio.rerio.MAPK13..tr.E7F292.E7F292_DANRE.Unchara PTAYDDSYDN A TLPLEEWKRL Site 2262
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Schizosaccharomyces.pombe.CDK9..Probable.cyclin.de YSIARQSANQ K TNEQHPSSTS Site 2737
Xenopus.laevis.CSK2a1..sp.P28020.CSK21_XENLA.Casei ---------- - ----------  
Xenopus.tropicalis.HIPK3..tr.F6SEG6.F6SEG6_XENTR.U PRLLPSPTIH Q TQFKPIFPSH Site 2901
Mus.musculus.CDK11B.sp.P24788.CD11B_MOUSE.Cyclin.d GTSPRPPEGG L GYSQLGDDDL Site 2496
Candida.dubliniensis.IME2 GTRESEMEPR R AGNGTSDLKK Site 2699
Mus.musculus.MAPK9..sp.Q9WTU6.MK09_MOUSE.Mitogen.a AAVSSKATPS Q SSSINDISSM Site 2494
Aspergillus.niger.IME2 PCRRLPLAEE K TDANTSRQWP Site 2771
Xenopus.laevis.MAPK14..sp.P47812.MK14_XENLA.Mitoge -DEPIAEPYD Q SFESRELDIE Site 2494
Homo.sapiens.CDKL3..sp.Q8IVW4.CDKL3_HUMAN.Cyclin.d LKRESKKTES S KIPTLLNVDQ Site 2760
Homo.sapiens.CDK14..Cyclin.dependent.kinase.14.OS. -RLWELTDMS S IFTVPNVRLQ Site 2494
Homo.sapiens.CSK2a3...sp.Q8NEV1.CSK23_HUMAN.Casein ---------- - ----------  
Caenorhabditis.briggsae.DYRK1..Dual.specificity.ty ---------- - ----------  
Schizosaccharomyces.japonicus.IME2 NSSSKPSIKS E DLLNPDTFFT Site 2755
Caenorhabditis.elegans.MAPK8.sp.Q8WQG9.JNK1_CAEEL. --EIEVYAPP P LPYDHNMDVE Site 2257
Gallus.gallus.CDK1 ---------- - ----------  
Homo.sapiens.CDK5..sp.Q00535.CDK5_HUMAN.Cyclin.dep ---------- - ----------  
Cordyceps.militaris.GSK3..tr.G3JGQ8.G3JGQ8_CORMM.P QLRDLPELFN F TRHVPPHQRS Site 2495
Caenorhabditis.briggsae.CDK4..tr.Q8MUK2.Q8MUK2_CAE ---------- - ----------  
Caenorhabditis.elegans.GSK3..sp.Q9U2Q9.GSK3_CAEEL. ---------- - ARLPSGRPLP  
Homo.sapiens.MAPK12..sp.P53778.MK12_HUMAN.Mitogen. QVQKYDDSFD D VDRTLDEWKR Site 2498
Saccharmomyces.cerevisiase.CK2a2..sp.P19454.CSK22_ ---------- - ----------  
Kluyveromyces.waltii.IME2 DDMSVDSSSS N RIPRSFAVPR Site 2732
Debaryomyces.hansenii.SKY1 ---------- - ----------  
Saccharomyces.cerevisiae.IME2 ASLGDSFNSM P DFTPRNFLIP Site 2716
Schizosaccharomyces.japonicus.b.IME2 VSNSATKSIY Y TPGFPSNQET Site 2790
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Xenopus.tropicalis.CDK6..tr.F6YRJ4.F6YRJ4_XENTR.Un ---------- - ----------  
Gallus.gallus.CSK2a2..sp.P21869.CSK22_CHICK.Casein ---------- - ----------  
Homo.sapiens.MAPK6..sp.Q16659.MK06_HUMAN.Mitogen.a SIGIPQFHSP V GSPLKSIQAT Site 2812
Mus.musculus.CDK6..sp.Q64261.CDK6_MOUSE.Cyclin.dep ---------- - ----------  
Saccharomyces.cerevisiae.MRK1.sp.P50873.MRK1_YEAST DTYVKAQNLR I FDFDVETELG Site 2494
Xenopus.laevis.MAPK12..tr.Q7ZZX6.Q7ZZX6_XENLA.Mapk DDETEAEPYD D SFDNVNLPLE Site 2494
Mus.musculus.CDKL3.sp.Q8BLF2.CDKL3_MOUSE.Cyclin.de KRESKKTDSS K IPTLLSMDPN Site 2767
Danio.rerio.MAPK8.sp.Q9DGD9.MK08_DANRE.Mitogen.act DKQLDEREHS V EEWKELIYKE Site 2494
Candida.albicans.IME2 GTRESEMEPR R AGNEAHDLKK Site 2699
Xenopus.laevis.CDK4..sp.Q91727.CDK4_XENLA.Cyclin.d ---------- - ----------  
Dictyostelium.discoideum.CDK11..Cyclin.dependent.k ---------- - ----------  
Mus.musculus.MAPK14..sp.P47811.MK14_MOUSE.Mitogen. -DEPVADPYD Q SFESRDLLID Site 2494
Kluyveromyces.lactis.IME2 IPRNLLERAV Q QRVLDCLLDP Site 2766
Homo.sapiens.MAPK7..Mitogen.activated.protein.kina ASLSASLLAD W LEGHGMNPAD Site 2778
Mus.musculus.MAPK10..sp.Q61831.MK10_MOUSE.Mitogen. AAVNSSESLP P SSAVNDISSM Site 2493
Homo.sapiens.MAPK11..sp.Q15759.MK11_HUMAN.Mitogen. EAEPYDESVE A KERTLEEWKE Site 2498
Drosophila.melanogaster.CK1b...gi.7292799.gb.AAF48 ---------- - MLKQKTHQGQ  
Mus.musculus.MAPK11..sp.Q9WUI1.MK11_MOUSE.Mitogen. EAEPYDESVE A KERTLEEWKE Site 2498
Amphimedon.queenslandica.CDK1 ---------- - ----------  
Homo.sapiens.CDKL4..sp.Q5MAI5.CDKL4_HUMAN.Cyclin.d ---------- - ----------  
Taeniopygia.guttata.CDK3..tr.H0ZCU2.H0ZCU2_TAEGU.U ---------- - ----------  
Drosophila.melanogaster.CDK11.sp.Q9VPC0.KP58_DROME KLSSGIITGN K KSHGAGGSSA Site 2668
Neurospora.crassa.IME2 KEALTPQSLE P KKRSSEYKWP Site 2784
Drosophila.melanogaster.CDK5..sp.P48609.CDK5_DROME ---------- - ----------  
Dictyostelium.discoideum.DYRK2..Probable.serine.th ---------- - ----------  
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Mus.musculus.CDK4..sp.P30285.CDK4_MOUSE.Cyclin.dep ---------- - ----------  
Hydra.magnipapillata.CDK1 ---------- - ----------  
Gallus.gallus.CDK10..tr.F1NCQ0.F1NCQ0_CHICK.Unchar ---------- - --CEPELMPT  
Ashbya.gossypii.IME2 STDSHSQIPR D FIMEPTTIPQ Site 2773
Mus.musculus.TTK..sp.P35761.TTK_MOUSE.Dual.specifi VLGQLVGLNS P NSILKTAKTL Site 2494
Homo.sapiens.DYRK3..Dual.specificity.tyrosine.phos ---------- - ----------  
Saccharomyces.cerevisiae.RIM11..Serine.threonine.p ---DDGKINQ I TTDLKLLEFD Site 2494
Danio.rerio.MAPK15..tr.Q0H1F6.Q0H1F6_DANRE.Extrace SKGLVLALAH T HRCHIHRCHT Site 2742
Schizosaccharomyces.pombe.b.IME2 CLLLQKSGME M TSVLEYSTPN Site 2727
Mus.musculus.MAPK1..sp.P63085.MK01_MOUSE.Mitogen.a ------DEPI A EAPFKFDMEL Site 2493
Mus.musculus.HIPK3..sp.Q9ERH7.HIPK3_MOUSE.Homeodom PRLLPSPTIH Q TQYKPIFPPH Site 2901
Schizosaccharomyces.pombe.CDK1 ---------- - ----------  
Oryzias.latipes.CLK2a..tr.H2LBC0.H2LBC0_ORYLA.Unch ---------- - ----------  
Saccoglossus.kowalevskii.CDK1 ---------- - ----------  
Mus.musculus.CK1..gi.20544149.ref.NP_620690.1..cas ---------- - VSSSDLTGRQ  
Mus.musculus.MAPK8.sp.Q91Y86.MK08_MOUSE.Mitogen.ac DKQLDEREHT I EEWKELIYKE Site 2503
Mus.musculus.CDK3..sp.Q80YP0.CDK3_MOUSE.Cyclin.dep ---------- - ----------  
Mus.musculus.SGK71..sp.Q80YS9.SGK71_MOUSE.Probable SLELISYADE I LQVLEANAQP Site 2759
Homo.sapiens.CDK3..sp.Q00526.CDK3_HUMAN.Cyclin.dep ---------- - ----------  
Yarrowia.lipolytica.IME2 PDLDKGNVWV R SEELECPVYP Site 2770
Saccharomyces.cerevisiae.SSN3..Meiotic.mRNA.stabil ITAGAAANAL G GLGVNRRILA Site 2494
Carassius.auratus.CDK2..sp.P43450.CDK2_CARAU.Cycli ---------- - ----------  
Kluyveromyces.lactis.CDC7.tr.Q6CUJ8.Q6CUJ8_KLULA.K ---------- - ----------  
Neurospora.crassa.GSK3..tr.Q9HE92.Q9HE92_NEUCS.Gly RHELSIAPQL N HKLVPSHMRP Site 2495
Schizosaccharomyces.pombo.GSK3..Protein.kinase.gsk LFNFSPFELS I RPDLNQKLIP Site 2493
Species Residue at Site 4888
in 'msaprobs'
muscle

The residue for every species at site 4888 of the msaprobs alignment can be found in the muscle alignment, but with a possibly different site number.

Caenorhabditis.elegans.MBK1..Dual.specificity.tyro ---------- - ----------  
Mus.musculus.NLK..sp.O54949.NLK_MOUSE.Serine.threo HQFILEQQKG N RVPLCINPQS Site 2493
Scheffersomyces.stipitis.SKY1 ---------- - ----------  
Mus.musculus.CDK5..sp.P49615.CDK5_MOUSE.Cyclin.dep ---------- - ----------  

Generated by PhyloBot at 02:22, October 16th 2019
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